Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30938X
         (549 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    21   5.4  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   7.1  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   7.1  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   9.4  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   9.4  

>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/31 (29%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = +2

Query: 317 ISIW--HRKKVMQILTMPPRRRLEVSLLMWL 403
           ++IW   R ++      PP+ R +V +L+W+
Sbjct: 16  LNIWVPQRLRIRHHGDKPPQERPKVPVLVWI 46


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +2

Query: 158 VLSGLTPLSIILKRHYAEKQIFERTKPHCNV 250
           V SGL P+   L R    ++  E  K H N+
Sbjct: 358 VTSGLLPVRPPLTREEIHEKARENLKHHANL 388


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -3

Query: 379 EPSPRGHCQYLHNLFS 332
           EP P  HC   H  F+
Sbjct: 100 EPQPSQHCPRKHGYFA 115


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = -2

Query: 431 CLCSVWY 411
           CLCS+W+
Sbjct: 220 CLCSLWF 226


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = -2

Query: 431 CLCSVWY 411
           CLCS+W+
Sbjct: 220 CLCSLWF 226


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,165
Number of Sequences: 336
Number of extensions: 2735
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)