Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30938X
(549 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 140 7e-34
02_04_0462 + 23131433-23132836 136 8e-33
03_01_0548 + 4099386-4099847,4100435-4101316 58 3e-09
03_01_0547 + 4093196-4093657,4094267-4095148 58 3e-09
03_01_0544 + 4082528-4082989,4083585-4084466 58 3e-09
03_01_0543 + 4076981-4077442,4078145-4079026 58 3e-09
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 55 3e-08
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 55 3e-08
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 52 2e-07
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 43 1e-04
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 43 2e-04
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 42 4e-04
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 41 6e-04
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 40 0.001
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 40 0.002
03_05_0511 + 25056018-25059107 36 0.016
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 36 0.021
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 36 0.028
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 35 0.049
01_06_0662 + 30987187-30987277,30987825-30990214 35 0.049
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 35 0.049
02_04_0148 - 20198407-20201424 33 0.11
04_01_0103 + 1082077-1082167,1083037-1085477 33 0.15
02_04_0017 + 18937774-18937864,18938505-18940945 33 0.15
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 29 3.2
05_07_0212 + 28434612-28435931,28436012-28436044,28436557-284366... 29 3.2
10_01_0353 + 3882691-3882937,3883216-3883320,3883780-3883907 28 5.6
02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258 28 5.6
10_08_0934 + 21667688-21667860,21667995-21668093,21668528-216687... 27 7.5
04_04_1093 + 30825722-30826168,30826457-30826608,30826926-308270... 27 7.5
07_03_1513 - 27327702-27328604,27329957-27329995,27330413-273306... 27 9.9
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 140 bits (339), Expect = 7e-34
Identities = 62/84 (73%), Positives = 70/84 (83%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTEQRHY 435
IGHVDHGKTTLTAAITKVL++ A+ + +ID APEEKARGITI AHVEY+T +RHY
Sbjct: 73 IGHVDHGKTTLTAAITKVLAEAGKAKAVAFDEIDKAPEEKARGITIATAHVEYETAKRHY 132
Query: 436 GHTDCPGHADYIKNMITGTAQMDG 507
H DCPGHADY+KNMITG AQMDG
Sbjct: 133 AHVDCPGHADYVKNMITGAAQMDG 156
>02_04_0462 + 23131433-23132836
Length = 467
Score = 136 bits (330), Expect = 8e-33
Identities = 61/84 (72%), Positives = 69/84 (82%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTEQRHY 435
IGHVDHGKTTLTAA+T VL+ + + K Y +ID APEE+ARGITIN A VEY+TE RHY
Sbjct: 76 IGHVDHGKTTLTAALTMVLASVGGSAPKKYDEIDAAPEERARGITINTATVEYETETRHY 135
Query: 436 GHTDCPGHADYIKNMITGTAQMDG 507
H DCPGHADY+KNMITG AQMDG
Sbjct: 136 AHVDCPGHADYVKNMITGAAQMDG 159
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 58.4 bits (135), Expect = 3e-09
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 15/98 (15%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAIT---------------KVLSDLNLAQKKGYADIDNAPEEKARGIT 390
IGHVD GK+T T + K +++N K +D E+ RGIT
Sbjct: 13 IGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIT 72
Query: 391 INVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMD 504
I++A +++T + + D PGH D+IKNMITGT+Q D
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 58.4 bits (135), Expect = 3e-09
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 15/98 (15%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAIT---------------KVLSDLNLAQKKGYADIDNAPEEKARGIT 390
IGHVD GK+T T + K +++N K +D E+ RGIT
Sbjct: 13 IGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIT 72
Query: 391 INVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMD 504
I++A +++T + + D PGH D+IKNMITGT+Q D
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 58.4 bits (135), Expect = 3e-09
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 15/98 (15%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAIT---------------KVLSDLNLAQKKGYADIDNAPEEKARGIT 390
IGHVD GK+T T + K +++N K +D E+ RGIT
Sbjct: 13 IGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIT 72
Query: 391 INVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMD 504
I++A +++T + + D PGH D+IKNMITGT+Q D
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 58.4 bits (135), Expect = 3e-09
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 15/98 (15%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAIT---------------KVLSDLNLAQKKGYADIDNAPEEKARGIT 390
IGHVD GK+T T + K +++N K +D E+ RGIT
Sbjct: 13 IGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIT 72
Query: 391 INVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMD 504
I++A +++T + + D PGH D+IKNMITGT+Q D
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 55.2 bits (127), Expect = 3e-08
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 15/98 (15%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YA-DIDNAPEEKARGIT 390
+GHVD GK+TL+ + +L ++ A++KG YA +D + EE+ RG+T
Sbjct: 253 VGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEERERGVT 312
Query: 391 INVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMD 504
+ VA +T++ D PGH D++ NMI+G Q D
Sbjct: 313 MTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQAD 350
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 55.2 bits (127), Expect = 3e-08
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 15/98 (15%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YA-DIDNAPEEKARGIT 390
+GHVD GK+TL+ + +L ++ A++KG YA +D + EE+ RG+T
Sbjct: 253 VGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEERERGVT 312
Query: 391 INVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMD 504
+ VA +T++ D PGH D++ NMI+G Q D
Sbjct: 313 MTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQAD 350
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 52.4 bits (120), Expect = 2e-07
Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 5/144 (3%)
Frame = +1
Query: 88 KFG*SSCEISSEAKPVCKCTKHN-SPVRIDSIKYNTQETLCRKTNL*TYKAPLQCWQIGH 264
+FG SS +S ++ C H + ++ ++ + + + YK + W + H
Sbjct: 206 EFGESSESVSVGSQNETLCLDHELQHLSLERKSQKSKANIKKPVSSSLYKP--EPWMLQH 263
Query: 265 VDHGKTTLTAAITKVLSDLNLAQKKG---YA-DIDNAPEEKARGITINVAHVEYQTEQRH 432
D G + LNLA KG YA +D + +E+ RGIT+ V + T+ H
Sbjct: 264 EDEG----------IPRQLNLAIGKGSFAYAWAMDESADERERGITMTVGVAYFDTKNYH 313
Query: 433 YGHTDCPGHADYIKNMITGTAQMD 504
D PGH D++ NMI+G Q D
Sbjct: 314 VVLLDSPGHKDFVPNMISGATQSD 337
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 43.2 bits (97), Expect = 1e-04
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINV--AHVEYQTEQR 429
I H+DHGK+TL + ++ + + K +DN E+ RGITI + A + Y
Sbjct: 83 IAHIDHGKSTLADKLLELTGTVQKREMK-QQFLDNMDLERERGITIKLQAARMRYIMNDE 141
Query: 430 HY--GHTDCPGHADYIKNMITGTAQMDG 507
Y D PGH D+ + A +G
Sbjct: 142 PYCLNLIDTPGHVDFSYEVSRSLAACEG 169
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +1
Query: 337 KGYADIDNAPEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMD 504
K + D+ E K G T+ V ++TE + D PGH Y+ NMI+G +Q D
Sbjct: 3 KDHKDLSIKMEPK--GKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQAD 56
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 41.5 bits (93), Expect = 4e-04
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +1
Query: 352 IDNAPEEKARGITINVAHVEYQTEQRHYGHTDCP----GHADYIKNMITGTAQMD 504
+D EE+ +G T+ V ++TE + D P GH Y+ NMI+G +Q D
Sbjct: 47 MDTNEEERLKGKTVEVGRAHFETETTRFTILDAPVKMKGHKSYVPNMISGASQAD 101
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 41.1 bits (92), Expect = 6e-04
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAI---TKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTEQ 426
+ HVDHGKTTL ++ KV D + Q++ +D+ E+ RGITI + +
Sbjct: 125 VAHVDHGKTTLVDSMLRQAKVFRDNQVVQER---IMDSNDLERERGITILSKNTSITYKG 181
Query: 427 RHYGHTDCPGHADY 468
D PGH+D+
Sbjct: 182 TKINIIDTPGHSDF 195
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/71 (32%), Positives = 35/71 (49%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTEQRHY 435
I HVDHGKTTL + + ++ ++ +D+ E+ RGITI ++
Sbjct: 70 IAHVDHGKTTLMDRLLRQCG-ADIPHERA---MDSISLERERGITIASKVTSVSWKENEL 125
Query: 436 GHTDCPGHADY 468
D PGHAD+
Sbjct: 126 NMVDTPGHADF 136
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYAD---IDNAPEEKARGITI--NVAHVEYQT 420
I HVDHGK+TL + ++ + KKG+ +D E+ RGIT+ A + Y+
Sbjct: 63 IAHVDHGKSTLADRLLELTGTI----KKGHGQPQYLDKLQVERERGITVKAQTATMFYRH 118
Query: 421 EQRHYGHTDCPGHADYIKNMITGTAQMDGVY 513
+D P Y+ N+I +D Y
Sbjct: 119 ANNQLPASDQPDAPSYLLNLIDTPGHVDFSY 149
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 36.3 bits (80), Expect = 0.016
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSD-LNLAQKKG-YADIDNAPEEKARGITINVAHVEYQTEQR 429
+ HVDHGKTTL + D L + G +D EE+ R IT+ A V
Sbjct: 16 LAHVDHGKTTLADHLVASCGDGLVHPRLAGRLRFMDYLDEEQRRAITMKSAAVVLHHGGH 75
Query: 430 HYGHTDCPGHADYIKNMITGTAQMD 504
D PGH D+ + + D
Sbjct: 76 RVNLIDSPGHIDFCSEVSSAARLSD 100
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 35.9 bits (79), Expect = 0.021
Identities = 34/117 (29%), Positives = 49/117 (41%), Gaps = 25/117 (21%)
Frame = +1
Query: 232 KAPLQCWQIGHVDHGKTTLTAAITKVLS-------DLNLAQKKGYAD--IDNAPEEKARG 384
+A + IGHV HGK+T+ AI+ V + + N+ K GYA+ I +EK
Sbjct: 58 QATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDEKCPR 117
Query: 385 ITINVAHVEYQTEQ----------------RHYGHTDCPGHADYIKNMITGTAQMDG 507
A+ + + RH DCPGH + M+ G A MDG
Sbjct: 118 PMCYKAYGSGKEDSPHCDVPGFENTRMKLLRHVSFVDCPGHDILMATMLNGAAIMDG 174
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 35.5 bits (78), Expect = 0.028
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLS-DLNLAQ-KKGYADIDNAPEEKARGITINVAHVEYQTEQR 429
+ H+D GKTT T + + + + ++G +D +E+ RGITI +
Sbjct: 110 MAHIDAGKTTTTERVLYYTGRNYKIGEFQEGTVTMDWMEQEQERGITITSPPTTAFWNKH 169
Query: 430 HYGHTDCPGHADYIKNMITGTAQMDG 507
D PGH D+ + +DG
Sbjct: 170 RINIIDTPGHVDFTLEVERALRVLDG 195
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 34.7 bits (76), Expect = 0.049
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Frame = +1
Query: 262 HVDHGKTTLTAAITKVLSDLN-LAQKKGY----ADIDNAPEEKARGITINVAHVEYQTEQ 426
H+D GKTTLT + ++ + + +G A +D+ E+ +GITI A
Sbjct: 76 HIDSGKTTLTERVLYYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATYCTWNG 135
Query: 427 RHYGHTDCPGHADYIKNMITGTAQMDG 507
D PGH D+ + +DG
Sbjct: 136 YQVNIIDTPGHVDFTIEVERALRVLDG 162
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 34.7 bits (76), Expect = 0.049
Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTEQRHY 435
+ HVDHGK+TLT ++ + D+ +E RGITI + E
Sbjct: 25 VAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDSRSDEAERGITIKSTGISLYYEMSDE 84
Query: 436 GHTDCPGHAD---YIKNMITGTAQMD 504
G D Y+ N+I +D
Sbjct: 85 SLKSYKGDRDGNEYLINLIDSPGHVD 110
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 34.7 bits (76), Expect = 0.049
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTEQRHY 435
I HVDHGK+TLT ++ + D +E RGITI + E
Sbjct: 25 IAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDA 84
Query: 436 GHTDCPGHAD---YIKNMITGTAQMD 504
G D Y+ N+I +D
Sbjct: 85 ALRSFEGKRDGNSYLINLIDSPGHID 110
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 33.5 bits (73), Expect = 0.11
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Frame = +1
Query: 256 IGHVDHGKTTLT-AAITKVLSDLNLAQK-KGYADI-DNAPEEKARGITINVAHVEYQT-E 423
+ HVDHGKT+L I S+ ++++ G A + D+ EE+ R IT+ A + +
Sbjct: 22 LAHVDHGKTSLADHLIAAYGSERRVSERMAGSARVMDHLEEEQRRAITMKSASIALRRGG 81
Query: 424 QRHYGH----TDCPGHADY 468
+ GH D PGH D+
Sbjct: 82 EDGGGHRVHLIDSPGHIDF 100
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 33.1 bits (72), Expect = 0.15
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTEQRHY 435
I HVDHGK+TLT ++ + D +E RGITI + E
Sbjct: 25 IAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLFYEMSDE 84
Query: 436 GHTDCPGHAD---YIKNMITGTAQMD 504
G D Y+ N+I +D
Sbjct: 85 SLKLYKGERDGNEYLINLIDSPGHVD 110
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 33.1 bits (72), Expect = 0.15
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTEQRHY 435
I HVDHGK+TLT ++ + D +E RGITI + E
Sbjct: 25 IAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLFYEMSDE 84
Query: 436 GHTDCPGHAD---YIKNMITGTAQMD 504
G D Y+ N+I +D
Sbjct: 85 SLKLYKGERDGNEYLINLIDSPGHVD 110
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 28.7 bits (61), Expect = 3.2
Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 8/92 (8%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYADI---DNAPEEKARGITINVAHVEYQTE- 423
+GH+ HGKT + + +++ +G + D +E+ R ++I + E
Sbjct: 154 VGHLQHGKTVFMDMLVEQTHEVDTFDSEGERHVRFTDTRVDEQERRVSIKAVPMSLVLEG 213
Query: 424 --QRHY--GHTDCPGHADYIKNMITGTAQMDG 507
+ Y D PGH ++ M DG
Sbjct: 214 GNGKSYLCNIMDTPGHVNFSDEMTAALRIADG 245
>05_07_0212 +
28434612-28435931,28436012-28436044,28436557-28436670,
28436767-28437102,28437221-28437283,28437364-28437519,
28437650-28437715,28439074-28439310,28439403-28439678,
28440060-28440248,28440459-28440620
Length = 983
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITK 306
+GHVDHGKTTL I K
Sbjct: 433 MGHVDHGKTTLLDYIRK 449
>10_01_0353 + 3882691-3882937,3883216-3883320,3883780-3883907
Length = 159
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 167 GLTPLSIILKRHYAEKQIFERTKPH 241
GLTPLS I E +I ERT+ H
Sbjct: 67 GLTPLSAITGSELPEPRIMERTRRH 91
>02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258
Length = 874
Score = 27.9 bits (59), Expect = 5.6
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = +1
Query: 253 QIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQ 417
Q G HGK + AA + DLN++ D D A EE+ G H +Q
Sbjct: 807 QDGDDHHGKEAVAAAASPSCFDLNMSMD----DDDEAAEERCTGEEEEAGHHHHQ 857
>10_08_0934 +
21667688-21667860,21667995-21668093,21668528-21668736,
21668786-21668925
Length = 206
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 267 NMSDLPTLQWGFVRSKICF 211
N TLQW VR KICF
Sbjct: 82 NALQTQTLQWSLVRMKICF 100
>04_04_1093 +
30825722-30826168,30826457-30826608,30826926-30827048,
30827240-30827384,30828032-30828093,30828373-30828586,
30829671-30830585,30830827-30831076,30831164-30831432
Length = 858
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = -1
Query: 444 SVSIMPLFGLVFDMSHI--NSDTSSLLLGGIVNICITF 337
S +MP L + ++H+ N+D SSLLL G NI I +
Sbjct: 148 SEMLMPETDLGYKVTHLSLNTDGSSLLLAGSHNISILY 185
>07_03_1513 - 27327702-27328604,27329957-27329995,27330413-27330692,
27330772-27330942,27331025-27331857,27331939-27332400,
27332479-27333212,27333301-27333430
Length = 1183
Score = 27.1 bits (57), Expect = 9.9
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 221 FERTKPHCNVGKSDMLITGRLHXXXXXLRYYLISIWHRKKVMQ-ILTMPPRRRLEVSLLM 397
F+ HC + M + R+ +R LI + + V+Q IL + RR+EV L+
Sbjct: 1058 FDENGGHCFLKCKPMKLCWRI-LCLEDIRLSLIQLVSARDVVQTILKLEDDRRMEVFFLL 1116
Query: 398 WL 403
W+
Sbjct: 1117 WV 1118
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,319,101
Number of Sequences: 37544
Number of extensions: 281507
Number of successful extensions: 610
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 605
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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