Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30938X
(549 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 141 3e-34
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 141 3e-34
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 141 3e-34
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 118 4e-27
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 118 4e-27
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 59 2e-09
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 59 2e-09
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 58 3e-09
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 58 3e-09
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 58 3e-09
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 58 3e-09
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 55 4e-08
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 44 7e-05
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 41 5e-04
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 41 5e-04
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 35 0.034
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 35 0.034
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 33 0.10
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 31 0.72
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 31 0.72
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 29 1.7
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 29 1.7
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 28 3.9
AL132860-11|CAB60517.1| 440|Caenorhabditis elegans Hypothetical... 28 3.9
AF069986-1|AAC39136.1| 440|Caenorhabditis elegans nitrilase and... 28 3.9
Z75956-1|CAB00128.2| 489|Caenorhabditis elegans Hypothetical pr... 27 6.7
AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain, ... 27 8.9
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 141 bits (342), Expect = 3e-34
Identities = 64/92 (69%), Positives = 73/92 (79%)
Frame = +1
Query: 232 KAPLQCWQIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVE 411
K L IGHVDHGKTTLT+AITK+L+ A+ + Y DIDNAPEEKARGITIN H+E
Sbjct: 47 KPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFHLE 106
Query: 412 YQTEQRHYGHTDCPGHADYIKNMITGTAQMDG 507
Y+T +RHY H DCPGHADYIKNMITG AQM+G
Sbjct: 107 YETAKRHYAHIDCPGHADYIKNMITGAAQMEG 138
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = +2
Query: 179 LSIILKRHYAE---KQIFERTKPHCNVG 253
+S++ RH A K +F+R KPH NVG
Sbjct: 26 VSLMQARHLAVPGGKAVFKRDKPHLNVG 53
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 141 bits (342), Expect = 3e-34
Identities = 64/92 (69%), Positives = 73/92 (79%)
Frame = +1
Query: 232 KAPLQCWQIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVE 411
K L IGHVDHGKTTLT+AITK+L+ A+ + Y DIDNAPEEKARGITIN H+E
Sbjct: 48 KPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFHLE 107
Query: 412 YQTEQRHYGHTDCPGHADYIKNMITGTAQMDG 507
Y+T +RHY H DCPGHADYIKNMITG AQM+G
Sbjct: 108 YETAKRHYAHIDCPGHADYIKNMITGAAQMEG 139
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = +2
Query: 179 LSIILKRHYAE---KQIFERTKPHCNVG 253
+S++ RH A K +F+R KPH NVG
Sbjct: 27 VSLMQARHLAVPGGKAVFKRDKPHLNVG 54
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 141 bits (342), Expect = 3e-34
Identities = 64/92 (69%), Positives = 73/92 (79%)
Frame = +1
Query: 232 KAPLQCWQIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVE 411
K L IGHVDHGKTTLT+AITK+L+ A+ + Y DIDNAPEEKARGITIN H+E
Sbjct: 48 KPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFHLE 107
Query: 412 YQTEQRHYGHTDCPGHADYIKNMITGTAQMDG 507
Y+T +RHY H DCPGHADYIKNMITG AQM+G
Sbjct: 108 YETAKRHYAHIDCPGHADYIKNMITGAAQMEG 139
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = +2
Query: 179 LSIILKRHYAE---KQIFERTKPHCNVG 253
+S++ RH A K +F+R KPH NVG
Sbjct: 27 VSLMQARHLAVPGGKAVFKRDKPHLNVG 54
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 118 bits (283), Expect = 4e-27
Identities = 53/93 (56%), Positives = 67/93 (72%)
Frame = +1
Query: 226 TYKAPLQCWQIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAH 405
T K + IGH+DHGKTTLT+AIT+V + A+ + +ID EEK RGITINVAH
Sbjct: 41 TPKINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDEIDKGKEEKKRGITINVAH 100
Query: 406 VEYQTEQRHYGHTDCPGHADYIKNMITGTAQMD 504
+ Y++ R Y HTDCPGH+D+IKNMI GT+QMD
Sbjct: 101 IGYESPLRRYSHTDCPGHSDFIKNMICGTSQMD 133
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 118 bits (283), Expect = 4e-27
Identities = 53/93 (56%), Positives = 67/93 (72%)
Frame = +1
Query: 226 TYKAPLQCWQIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAH 405
T K + IGH+DHGKTTLT+AIT+V + A+ + +ID EEK RGITINVAH
Sbjct: 41 TPKINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDEIDKGKEEKKRGITINVAH 100
Query: 406 VEYQTEQRHYGHTDCPGHADYIKNMITGTAQMD 504
+ Y++ R Y HTDCPGH+D+IKNMI GT+QMD
Sbjct: 101 IGYESPLRRYSHTDCPGHSDFIKNMICGTSQMD 133
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 58.8 bits (136), Expect = 2e-09
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSDLNL---------AQKKGYAD------IDNAPEEKARGIT 390
+GHVD GK+TL + L ++ A + G A +D EE+ RG+T
Sbjct: 176 VGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVT 235
Query: 391 INVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMD 504
+++ ++T R D PGH D+I NMITGT+Q D
Sbjct: 236 MDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQAD 273
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 58.8 bits (136), Expect = 2e-09
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSDLNL---------AQKKGYAD------IDNAPEEKARGIT 390
+GHVD GK+TL + L ++ A + G A +D EE+ RG+T
Sbjct: 194 VGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVT 253
Query: 391 INVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMD 504
+++ ++T R D PGH D+I NMITGT+Q D
Sbjct: 254 MDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQAD 291
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 58.4 bits (135), Expect = 3e-09
Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 15/98 (15%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YADI-DNAPEEKARGIT 390
IGHVD GK+T T + ++ AQ+ G YA + D E+ RGIT
Sbjct: 13 IGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGIT 72
Query: 391 INVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMD 504
I++A +++T + + D PGH D+IKNMITGT+Q D
Sbjct: 73 IDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQAD 110
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 58.4 bits (135), Expect = 3e-09
Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 15/98 (15%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YADI-DNAPEEKARGIT 390
IGHVD GK+T T + ++ AQ+ G YA + D E+ RGIT
Sbjct: 13 IGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGIT 72
Query: 391 INVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMD 504
I++A +++T + + D PGH D+IKNMITGT+Q D
Sbjct: 73 IDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQAD 110
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 58.4 bits (135), Expect = 3e-09
Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 15/98 (15%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YADI-DNAPEEKARGIT 390
IGHVD GK+T T + ++ AQ+ G YA + D E+ RGIT
Sbjct: 13 IGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGIT 72
Query: 391 INVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMD 504
I++A +++T + + D PGH D+IKNMITGT+Q D
Sbjct: 73 IDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQAD 110
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 58.4 bits (135), Expect = 3e-09
Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 15/98 (15%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YADI-DNAPEEKARGIT 390
IGHVD GK+T T + ++ AQ+ G YA + D E+ RGIT
Sbjct: 13 IGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGIT 72
Query: 391 INVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMD 504
I++A +++T + + D PGH D+IKNMITGT+Q D
Sbjct: 73 IDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQAD 110
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 54.8 bits (126), Expect = 4e-08
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 15/108 (13%)
Frame = +1
Query: 226 TYKAPLQCWQIGHVDHGKTTLTAAI---TKVLSDLNL------AQKKGYAD------IDN 360
T+K + +GHVD GK+T+ + T ++ L A++KG +D
Sbjct: 105 THKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDT 164
Query: 361 APEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMD 504
EE+ +G T+ V ++TE+RH+ D PGH ++ NMI G Q D
Sbjct: 165 NDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQAD 212
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 44.0 bits (99), Expect = 7e-05
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSDLNLAQK--KGYADIDNAPEEKARGITINVAHVEYQTEQR 429
I HVD GKTT+T + + +++A KG D E+ RGIT+ A V +
Sbjct: 31 IAHVDAGKTTVTERLLYLAGAIHVAGHVDKGNTVTDFLDIERERGITVQSAAVNLDWKGH 90
Query: 430 HYGHTDCPGHADYIKNMITGTAQMDGV 510
D PGH D+ + +DG+
Sbjct: 91 RINLIDTPGHVDFRVEVERCVRVLDGI 117
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/85 (28%), Positives = 38/85 (44%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTEQRHY 435
+ HVDHGK+TL + ++ + QK+ +D E+ RGIT+ +
Sbjct: 48 VAHVDHGKSTLADRLLEMCGAVPPGQKQ---MLDKLQVERERGITVKAQTAALRHRGYLL 104
Query: 436 GHTDCPGHADYIKNMITGTAQMDGV 510
D PGH D+ + A DG+
Sbjct: 105 NLIDTPGHVDFSAEVSRSLAVCDGI 129
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 41.1 bits (92), Expect = 5e-04
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTEQRHY 435
+ HVDHGKT+ ++ + ++ +D+ +E+ RGIT+ + + E
Sbjct: 26 VAHVDHGKTSFADSLVSANAVISSRMAGKLRYMDSREDEQTRGITMKSSGISLLCEPLLI 85
Query: 436 GHTDCPGHADY 468
D PGH D+
Sbjct: 86 NLIDSPGHVDF 96
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 41.1 bits (92), Expect = 5e-04
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTEQRHY 435
+ HVDHGKT+ ++ + ++ +D+ +E+ RGIT+ + + E
Sbjct: 26 VAHVDHGKTSFADSLVSANAVISSRMAGKLRYMDSREDEQTRGITMKSSGISLLCEPLLI 85
Query: 436 GHTDCPGHADY 468
D PGH D+
Sbjct: 86 NLIDSPGHVDF 96
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 36.7 bits (81), Expect = 0.011
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Frame = +1
Query: 262 HVDHGKTTLTAAITKVLSDLN-LAQKKGYADI----DNAPEEKARGITINVAHVEYQTEQ 426
H+D GKTT+T I ++ + + +G D+ D E+ RGITI A
Sbjct: 52 HIDSGKTTVTERILYYAGRIDSMHEVRGKDDVGATMDFMDLERQRGITIQSAATYVDWHG 111
Query: 427 RHYGHTDCPGHADYIKNMITGTAQMDG 507
+ D PGH D+ + +DG
Sbjct: 112 TNINIIDTPGHVDFTVEVERALRVLDG 138
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 35.1 bits (77), Expect = 0.034
Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Frame = +1
Query: 238 PLQCWQIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQ 417
PL +GHVD GKTTLT I ++ S A +A GI N + +
Sbjct: 13 PLNLGILGHVDSGKTTLTRRIAELGST--------SAFDAHATSTTTDGIRRNTLDLGFS 64
Query: 418 T----EQRHYGHTDCPGHADYIKNMITGTAQMD 504
T R DCPGH+ I+ ++ + D
Sbjct: 65 TMTSLSGRRLALIDCPGHSGLIRAVLAASTVFD 97
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 35.1 bits (77), Expect = 0.034
Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Frame = +1
Query: 238 PLQCWQIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQ 417
PL +GHVD GKTTLT I ++ S A +A GI N + +
Sbjct: 13 PLNLGILGHVDSGKTTLTRRIAELGST--------SAFDAHATSTTTDGIRRNTLDLGFS 64
Query: 418 T----EQRHYGHTDCPGHADYIKNMITGTAQMD 504
T R DCPGH+ I+ ++ + D
Sbjct: 65 TMTSLSGRRLALIDCPGHSGLIRAVLAASTVFD 97
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 33.5 bits (73), Expect = 0.10
Identities = 36/141 (25%), Positives = 55/141 (39%), Gaps = 24/141 (17%)
Frame = +1
Query: 163 VRIDSIKYNTQETLCRKTNL*TYKAPLQCWQIGHVDHGKTTLTAAITKVLS-------DL 321
V +D++ T+E + R+ A + IGHV HGK+TL A + V + +
Sbjct: 22 VGVDNLNPLTEEVISRQ-------ATINIGTIGHVAHGKSTLVKAFSGVHTVKFKRELER 74
Query: 322 NLAQKKGYADI-------DNAPEEKARGITINVAHVEYQTEQ----------RHYGHTDC 450
N+ K GYA+ P + + E+ RH DC
Sbjct: 75 NITIKLGYANAKIYRCSNQECPRPGCYRSAGSSTPDRFPCERAGCGGEFTCVRHVSFVDC 134
Query: 451 PGHADYIKNMITGTAQMDGVY 513
PGH + M+ G A MD +
Sbjct: 135 PGHDILMATMLNGAAVMDAAF 155
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 30.7 bits (66), Expect = 0.72
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 6/90 (6%)
Frame = +1
Query: 259 GHVDHGKTT-LTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITIN---VAHVEYQTEQ 426
GH+ HGKTT L + + + A+ D EK RG +I V+ V +
Sbjct: 139 GHLHHGKTTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRGCSIKSQPVSIVAQDSRS 198
Query: 427 RHY--GHTDCPGHADYIKNMITGTAQMDGV 510
+ Y D PGH ++ M DGV
Sbjct: 199 KSYLLNIIDTPGHVNFSDEMTASYRLADGV 228
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 30.7 bits (66), Expect = 0.72
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 6/90 (6%)
Frame = +1
Query: 259 GHVDHGKTT-LTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITIN---VAHVEYQTEQ 426
GH+ HGKTT L + + + A+ D EK RG +I V+ V +
Sbjct: 14 GHLHHGKTTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRGCSIKSQPVSIVAQDSRS 73
Query: 427 RHY--GHTDCPGHADYIKNMITGTAQMDGV 510
+ Y D PGH ++ M DGV
Sbjct: 74 KSYLLNIIDTPGHVNFSDEMTASYRLADGV 103
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITI 393
I HVDHGK+TLT ++ + ++ D +E+ R ITI
Sbjct: 25 IAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITI 70
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITI 393
I HVDHGK+TLT ++ + ++ D +E+ R ITI
Sbjct: 25 IAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITI 70
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 28.3 bits (60), Expect = 3.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAI 300
+GHVDHGKTTL A+
Sbjct: 162 MGHVDHGKTTLLDAM 176
>AL132860-11|CAB60517.1| 440|Caenorhabditis elegans Hypothetical
protein Y56A3A.13 protein.
Length = 440
Score = 28.3 bits (60), Expect = 3.9
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 302 LRYYLISIWHRKKVMQILTMPPRRRLEVSLLMW 400
+R+ +S+W+RK+ Q+L+ P L L W
Sbjct: 172 VRFPELSLWNRKRGAQLLSFPSAFTLNTGLAHW 204
>AF069986-1|AAC39136.1| 440|Caenorhabditis elegans nitrilase and
fragile histidinetriad fusion protein NitFhit protein.
Length = 440
Score = 28.3 bits (60), Expect = 3.9
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 302 LRYYLISIWHRKKVMQILTMPPRRRLEVSLLMW 400
+R+ +S+W+RK+ Q+L+ P L L W
Sbjct: 172 VRFPELSLWNRKRGAQLLSFPSAFTLNTGLAHW 204
>Z75956-1|CAB00128.2| 489|Caenorhabditis elegans Hypothetical
protein R31.2a protein.
Length = 489
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 474 EHDYRHSTNGWCILVVAATDG 536
+ +YRHS+NGW L AA G
Sbjct: 37 DKNYRHSSNGWTALHWAANRG 57
>AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 7 protein.
Length = 1887
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -1
Query: 549 FVALHHQLQLLLIYTIHLCCACN-HVLNVVS 460
FVA HQ ++ ++ +C CN H+ N +S
Sbjct: 1236 FVAKDHQFKMSRLHRQEICALCNRHLTNFIS 1266
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,703,579
Number of Sequences: 27780
Number of extensions: 262769
Number of successful extensions: 668
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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