Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30938X
(549 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 137 5e-33
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 136 9e-33
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 58 3e-09
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 58 3e-09
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 58 3e-09
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 58 3e-09
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 58 5e-09
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 51 6e-07
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 44 9e-05
At5g13650.2 68418.m01585 elongation factor family protein contai... 42 2e-04
At5g13650.1 68418.m01584 elongation factor family protein contai... 42 2e-04
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 41 6e-04
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 40 0.001
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 40 0.001
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 38 0.003
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 38 0.003
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 37 0.008
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 36 0.024
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 35 0.031
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 35 0.031
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 33 0.17
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 33 0.17
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 32 0.29
At5g25230.1 68418.m02991 elongation factor Tu family protein tra... 29 2.0
At2g01930.2 68415.m00128 expressed protein 29 2.0
At2g01930.1 68415.m00127 expressed protein 29 2.0
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 29 2.7
At2g38920.1 68415.m04784 SPX (SYG1/Pho81/XPR1) domain-containing... 27 6.2
At5g11800.1 68418.m01377 K+ efflux antiporter, putative (KEA6) M... 27 8.3
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 27 8.3
At1g11100.1 68414.m01271 SNF2 domain-containing protein / helica... 27 8.3
At1g09790.1 68414.m01098 phytochelatin synthetase-related contai... 27 8.3
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 137 bits (331), Expect = 5e-33
Identities = 61/84 (72%), Positives = 69/84 (82%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTEQRHY 435
IGHVDHGKTTLTAAITKVL++ A+ + +ID APEEK RGITI AHVEY+T +RHY
Sbjct: 73 IGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHVEYETAKRHY 132
Query: 436 GHTDCPGHADYIKNMITGTAQMDG 507
H DCPGHADY+KNMITG AQMDG
Sbjct: 133 AHVDCPGHADYVKNMITGAAQMDG 156
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 136 bits (329), Expect = 9e-33
Identities = 60/84 (71%), Positives = 68/84 (80%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTEQRHY 435
IGHVDHGKTTLTAA+T L+ + + K Y +ID APEE+ARGITIN A VEY+TE RHY
Sbjct: 85 IGHVDHGKTTLTAALTMALASIGSSVAKKYDEIDAAPEERARGITINTATVEYETENRHY 144
Query: 436 GHTDCPGHADYIKNMITGTAQMDG 507
H DCPGHADY+KNMITG AQMDG
Sbjct: 145 AHVDCPGHADYVKNMITGAAQMDG 168
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 58.4 bits (135), Expect = 3e-09
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 15/98 (15%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAIT---------------KVLSDLNLAQKKGYADIDNAPEEKARGIT 390
IGHVD GK+T T + K +++N K +D E+ RGIT
Sbjct: 13 IGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIT 72
Query: 391 INVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMD 504
I++A +++T + + D PGH D+IKNMITGT+Q D
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 58.4 bits (135), Expect = 3e-09
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 15/98 (15%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAIT---------------KVLSDLNLAQKKGYADIDNAPEEKARGIT 390
IGHVD GK+T T + K +++N K +D E+ RGIT
Sbjct: 13 IGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIT 72
Query: 391 INVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMD 504
I++A +++T + + D PGH D+IKNMITGT+Q D
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 58.4 bits (135), Expect = 3e-09
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 15/98 (15%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAIT---------------KVLSDLNLAQKKGYADIDNAPEEKARGIT 390
IGHVD GK+T T + K +++N K +D E+ RGIT
Sbjct: 13 IGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIT 72
Query: 391 INVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMD 504
I++A +++T + + D PGH D+IKNMITGT+Q D
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 58.4 bits (135), Expect = 3e-09
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 15/98 (15%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAIT---------------KVLSDLNLAQKKGYADIDNAPEEKARGIT 390
IGHVD GK+T T + K +++N K +D E+ RGIT
Sbjct: 13 IGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIT 72
Query: 391 INVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMD 504
I++A +++T + + D PGH D+IKNMITGT+Q D
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 57.6 bits (133), Expect = 5e-09
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 15/98 (15%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYAD---------------IDNAPEEKARGIT 390
+GHVD GK+TL+ + +L ++ Q Y +D + EE+ RGIT
Sbjct: 245 VGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAEERERGIT 304
Query: 391 INVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMD 504
+ VA + +++ H D PGH D++ NMI G Q D
Sbjct: 305 MTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQAD 342
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 50.8 bits (116), Expect = 6e-07
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYAD---------------IDNAPEEKARGIT 390
IGHVD GK+T+ I + ++ Q + Y +D EE+ +G T
Sbjct: 107 IGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTNEEERLKGKT 166
Query: 391 INVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMD 504
+ V ++TE + D PGH Y+ NMI+G +Q D
Sbjct: 167 VEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQAD 204
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 43.6 bits (98), Expect = 9e-05
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSDL-NLAQKKGYADIDNAPEEKARGITINV--AHVEYQTEQ 426
I H+DHGK+TL + +V + N K+ + +DN E+ RGITI + A + Y E
Sbjct: 92 IAHIDHGKSTLADKLLQVTGTVQNRDMKEQF--LDNMDLERERGITIKLQAARMRYVYED 149
Query: 427 RHY--GHTDCPGHADYIKNMITGTAQMDG 507
+ D PGH D+ + A +G
Sbjct: 150 TPFCLNLIDTPGHVDFSYEVSRSLAACEG 178
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 42.3 bits (95), Expect = 2e-04
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAI---TKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTEQ 426
+ HVDHGKTTL ++ KV D + Q++ +D+ E+ RGITI + +
Sbjct: 89 VAHVDHGKTTLVDSMLRQAKVFRDNQVMQER---IMDSNDLERERGITILSKNTSITYKN 145
Query: 427 RHYGHTDCPGHADYIKNMITGTAQMDGV 510
D PGH+D+ + +DGV
Sbjct: 146 TKVNIIDTPGHSDFGGEVERVLNMVDGV 173
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 42.3 bits (95), Expect = 2e-04
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAI---TKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTEQ 426
+ HVDHGKTTL ++ KV D + Q++ +D+ E+ RGITI + +
Sbjct: 88 VAHVDHGKTTLVDSMLRQAKVFRDNQVMQER---IMDSNDLERERGITILSKNTSITYKN 144
Query: 427 RHYGHTDCPGHADYIKNMITGTAQMDGV 510
D PGH+D+ + +DGV
Sbjct: 145 TKVNIIDTPGHSDFGGEVERVLNMVDGV 172
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 40.7 bits (91), Expect = 6e-04
Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 23/115 (20%)
Frame = +1
Query: 232 KAPLQCWQIGHVDHGKTTLTAAIT-----KVLSDL--NLAQKKGYADI-----DNAPEEK 375
+A + IGHV HGK+T+ A++ K S+L N+ K GYA+ + P
Sbjct: 31 QATINIGTIGHVAHGKSTIVKAVSGVHTVKFKSELERNITIKLGYANAKIYKCEKCPRPV 90
Query: 376 A-----RGITINVA-----HVEYQTEQ-RHYGHTDCPGHADYIKNMITGTAQMDG 507
A G N + H +Y+ + RH DCPGH + M+ G A MDG
Sbjct: 91 AYKSFGSGKEDNPSCDVSGHEKYKMKLLRHVSFVDCPGHDILMATMLNGAAIMDG 145
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 39.9 bits (89), Expect = 0.001
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Frame = +1
Query: 256 IGHVDHGKTTLT----AAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTE 423
+ HVDHGKTTL A+ + LA K + +D EE+ R IT+ + + + +
Sbjct: 15 LAHVDHGKTTLADHLIASSGGGVLHPRLAGKLRF--MDYLDEEQRRAITMKSSSISLKYK 72
Query: 424 QRHYGHTDCPGHADYIKNMITGTAQMDG 507
D PGH D+ + T DG
Sbjct: 73 DYSLNLIDSPGHMDFCSEVSTAARLSDG 100
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 39.5 bits (88), Expect = 0.001
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLS-DLNLAQ-KKGYADIDNAPEEKARGITINVAHVEYQTEQR 429
+ H+D GKTT T I + + + +G A +D +E+ RGITI A ++
Sbjct: 102 MAHIDAGKTTTTERILYYTGRNYKIGEVHEGTATMDWMEQEQERGITITSAATTTFWDKH 161
Query: 430 HYGHTDCPGHADYIKNMITGTAQMDG 507
D PGH D+ + +DG
Sbjct: 162 RINIIDTPGHVDFTLEVERALRVLDG 187
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 38.3 bits (85), Expect = 0.003
Identities = 36/117 (30%), Positives = 50/117 (42%), Gaps = 25/117 (21%)
Frame = +1
Query: 232 KAPLQCWQIGHVDHGKTTLTAAITKVLS-------DLNLAQKKGYADI-------DNAPE 369
+A + IGHV HGK+T+ AI+ V + + N+ K GYA+ D P
Sbjct: 37 QATINIGTIGHVAHGKSTIVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDDKCPR 96
Query: 370 E---------KARGITINVAHVEY--QTEQRHYGHTDCPGHADYIKNMITGTAQMDG 507
K T +V E T +RH DCPGH + M+ G A +DG
Sbjct: 97 PMCYKSYGSGKEDNPTCDVPGFENCKMTLRRHVSCVDCPGHDILMATMLNGAAIVDG 153
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 38.3 bits (85), Expect = 0.003
Identities = 36/117 (30%), Positives = 50/117 (42%), Gaps = 25/117 (21%)
Frame = +1
Query: 232 KAPLQCWQIGHVDHGKTTLTAAITKVLS-------DLNLAQKKGYADI-------DNAPE 369
+A + IGHV HGK+T+ AI+ V + + N+ K GYA+ D P
Sbjct: 37 QATINIGTIGHVAHGKSTIVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDDKCPR 96
Query: 370 E---------KARGITINVAHVEY--QTEQRHYGHTDCPGHADYIKNMITGTAQMDG 507
K T +V E T +RH DCPGH + M+ G A +DG
Sbjct: 97 PMCYKSYGSGKEDNPTCDVPGFENCKMTLRRHVSCVDCPGHDILMATMLNGAAIVDG 153
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 37.1 bits (82), Expect = 0.008
Identities = 36/117 (30%), Positives = 51/117 (43%), Gaps = 25/117 (21%)
Frame = +1
Query: 232 KAPLQCWQIGHVDHGKTTLTAAITKVLS-------DLNLAQKKGYADI-------DNAPE 369
+A + IGHV HGK+T+ AI+ V + + N+ K GYA+ + P
Sbjct: 31 QATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDEKCPR 90
Query: 370 E---KARGI----TINVAHVEYQTEQ----RHYGHTDCPGHADYIKNMITGTAQMDG 507
KA G T N ++ + RH DCPGH + M+ G A MDG
Sbjct: 91 PMCYKAYGSGKEDTPNCDVPGFENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDG 147
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 35.5 bits (78), Expect = 0.024
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVE--YQ-TEQ 426
I HVDHGK+TLT ++ + D +E RGITI + Y+ T++
Sbjct: 25 IAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDE 84
Query: 427 RHYGHTDCPGHADYIKNMITGTAQMD 504
T +Y+ N+I +D
Sbjct: 85 SLKSFTGARDGNEYLINLIDSPGHVD 110
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 35.1 bits (77), Expect = 0.031
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Frame = +1
Query: 262 HVDHGKTTLTAAITKVLSDLN-LAQKKGY----ADIDNAPEEKARGITINVAHVEYQTEQ 426
H+D GKTTLT + ++ + + +G A +D+ E+ +GITI A +
Sbjct: 73 HIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATYCTWKD 132
Query: 427 RHYGHTDCPGHADYIKNMITGTAQMDG 507
D PGH D+ + +DG
Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDG 159
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 35.1 bits (77), Expect = 0.031
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Frame = +1
Query: 262 HVDHGKTTLTAAITKVLSDLN-LAQKKGY----ADIDNAPEEKARGITINVAHVEYQTEQ 426
H+D GKTTLT + ++ + + +G A +D+ E+ +GITI A +
Sbjct: 73 HIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATYCTWKD 132
Query: 427 RHYGHTDCPGHADYIKNMITGTAQMDG 507
D PGH D+ + +DG
Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDG 159
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 32.7 bits (71), Expect = 0.17
Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 8/92 (8%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAI---TKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTE- 423
+GH+ HGKT + T +S N +K D +E+ R I+I + E
Sbjct: 144 VGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQERNISIKAVPMSLVLED 203
Query: 424 --QRHY--GHTDCPGHADYIKNMITGTAQMDG 507
+ Y D PGH ++ M DG
Sbjct: 204 SRSKSYLCNIMDTPGHVNFSDEMTASLRLADG 235
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 32.7 bits (71), Expect = 0.17
Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 8/92 (8%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAI---TKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTE- 423
+GH+ HGKT + T +S N +K D +E+ R I+I + E
Sbjct: 144 VGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQERNISIKAVPMSLVLED 203
Query: 424 --QRHY--GHTDCPGHADYIKNMITGTAQMDG 507
+ Y D PGH ++ M DG
Sbjct: 204 SRSKSYLCNIMDTPGHVNFSDEMTASLRLADG 235
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 31.9 bits (69), Expect = 0.29
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 10/81 (12%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPE-EKARGITI--NVAHVEYQT-- 420
I H+DHGK+TL + ++ + KKG+ + ++ RGIT+ A + Y+
Sbjct: 72 IAHIDHGKSTLADRLMELTGTI----KKGHGQPQYLDKLQRERGITVKAQTATMFYENKV 127
Query: 421 -EQRHYGH----TDCPGHADY 468
+Q G+ D PGH D+
Sbjct: 128 EDQEASGYLLNLIDTPGHVDF 148
>At5g25230.1 68418.m02991 elongation factor Tu family protein
translation Elongation Factor 2, Schizosaccharomyces
pombe, PIR:T39902
Length = 973
Score = 29.1 bits (62), Expect = 2.0
Identities = 23/92 (25%), Positives = 35/92 (38%), Gaps = 8/92 (8%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAI---TKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTE- 423
+GH+ HGKT + T +S N K D +E+ R I+I + E
Sbjct: 130 VGHLQHGKTVFMDMLVEQTHRMSTFNAENDKHMRYTDTRVDEQERNISIKAVPMSLVLED 189
Query: 424 --QRHY--GHTDCPGHADYIKNMITGTAQMDG 507
+ Y D PG+ ++ M DG
Sbjct: 190 SRSKSYLCNIMDTPGNVNFSDEMTASLRLADG 221
>At2g01930.2 68415.m00128 expressed protein
Length = 283
Score = 29.1 bits (62), Expect = 2.0
Identities = 21/74 (28%), Positives = 31/74 (41%)
Frame = +1
Query: 103 SCEISSEAKPVCKCTKHNSPVRIDSIKYNTQETLCRKTNL*TYKAPLQCWQIGHVDHGKT 282
S +IS PVC CT +P + ++ C TN+ Y P+ + G G+
Sbjct: 184 SMDISGLPVPVCTCT--GTPQQCYRWGCGGWQSACCTTNISVYPLPMSTKRRGARISGRK 241
Query: 283 TLTAAITKVLSDLN 324
A KVL L+
Sbjct: 242 MSQGAFKKVLEKLS 255
>At2g01930.1 68415.m00127 expressed protein
Length = 283
Score = 29.1 bits (62), Expect = 2.0
Identities = 21/74 (28%), Positives = 31/74 (41%)
Frame = +1
Query: 103 SCEISSEAKPVCKCTKHNSPVRIDSIKYNTQETLCRKTNL*TYKAPLQCWQIGHVDHGKT 282
S +IS PVC CT +P + ++ C TN+ Y P+ + G G+
Sbjct: 184 SMDISGLPVPVCTCT--GTPQQCYRWGCGGWQSACCTTNISVYPLPMSTKRRGARISGRK 241
Query: 283 TLTAAITKVLSDLN 324
A KVL L+
Sbjct: 242 MSQGAFKKVLEKLS 255
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAITK 306
+GHVDHGKTTL I K
Sbjct: 507 MGHVDHGKTTLLDYIRK 523
>At2g38920.1 68415.m04784 SPX (SYG1/Pho81/XPR1) domain-containing
protein / zinc finger (C3HC4-type RING finger)
protein-related weak similarity to tripartite motif
protein TRIM13 [Mus musculus] GI:12407427; contains Pfam
profile PF03105: SPX domain, weak hit to PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 335
Score = 27.5 bits (58), Expect = 6.2
Identities = 27/120 (22%), Positives = 46/120 (38%)
Frame = +1
Query: 76 NICEKFG*SSCEISSEAKPVCKCTKHNSPVRIDSIKYNTQETLCRKTNL*TYKAPLQCWQ 255
N FG +CE +E +PV K NS ++Y+ +C +T Y L+C
Sbjct: 195 NFKNSFGRVACENLNEDQPVLKLMLPNS----IELEYDLTCAICLETVFNPY--ALKC-- 246
Query: 256 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTEQRHY 435
GH+ +AA + + A + I A + + H+ +T + Y
Sbjct: 247 -GHIFCNSCACSAASVLIFQGIKAAPRHSKCPICREAGVYAEAVHMIELHLLLKTRSKEY 305
>At5g11800.1 68418.m01377 K+ efflux antiporter, putative (KEA6)
Monovalent cation:proton antiporter family 2 (CPA2
family) member, PMID:11500563; similar to
glutathione-regulated potassium-efflux system protein
KEFB, Escherichia coli, SWISSPROT:P45522
Length = 597
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 441 VSIMPLFGLVFDMSHINSDTSSLLLGGIVNICITFFLCQIEI 316
V ++ GL F + + S +LGG++ I + FLC I +
Sbjct: 236 VFLLFALGLEFSTAKLKVVRSVAVLGGLLQILLFMFLCGITV 277
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 256 IGHVDHGKTTLTAAI 300
+GHVDHGKT+L A+
Sbjct: 225 MGHVDHGKTSLLDAL 239
>At1g11100.1 68414.m01271 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to RUSH-1alpha [Oryctolagus cuniculus]
GI:1655930; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain
Length = 1226
Score = 27.1 bits (57), Expect = 8.3
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = -1
Query: 519 LLIYTIHLCCACNHVLNVVSMTWAVS---VSIMPLFGLVFDMSHINSDTSSLLLGGIVNI 349
+L+ + L AC H L V S++W+ S V +P L F + + +SL + GI N+
Sbjct: 868 ILLMLLRLRQACGHPLLVSSLSWSSSAEMVKKLPYEKLTFLLHRLE---ASLAICGICNV 924
>At1g09790.1 68414.m01098 phytochelatin synthetase-related contains
Pfam profile PF04833: Phytochelatin synthetase-like
conserved region
Length = 454
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +1
Query: 121 EAKPVCKCTKHNSPVRID-SIKYNTQE 198
E PV KC+ H P+RI +K N +E
Sbjct: 278 EVSPVVKCSDHMCPIRIHWHVKVNYRE 304
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,775,401
Number of Sequences: 28952
Number of extensions: 235794
Number of successful extensions: 625
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 618
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1033331880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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