Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30936
         (638 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024264-1|ABC86326.1|  208|Drosophila melanogaster IP15818p pro...   155   4e-38
AY061217-1|AAL28765.2|  221|Drosophila melanogaster LD16326p pro...   155   4e-38
AE013599-4000|AAS64772.1|  203|Drosophila melanogaster CG2746-PB...   155   4e-38
AE013599-3999|AAF47305.1|  203|Drosophila melanogaster CG2746-PA...   155   4e-38
X74776-1|CAA52784.1|  203|Drosophila melanogaster ribosomal prot...   153   3e-37
L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic dy...    29   7.0  
BT025964-1|ABG02208.1| 1312|Drosophila melanogaster IP16365p pro...    29   7.0  
AE014296-904|AAN11615.1| 3388|Drosophila melanogaster CG7507-PB,...    29   7.0  
AE014296-903|AAF47942.3| 4639|Drosophila melanogaster CG7507-PA,...    29   7.0  
AY060882-1|AAL28430.1|  222|Drosophila melanogaster GM04269p pro...    28   9.3  

>BT024264-1|ABC86326.1|  208|Drosophila melanogaster IP15818p
           protein.
          Length = 208

 Score =  155 bits (377), Expect = 4e-38
 Identities = 72/77 (93%), Positives = 75/77 (97%)
 Frame = +1

Query: 22  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 201
           MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 6   MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 65

Query: 202 ARVRKNTEARRKGRHCG 252
            RVRKNTEARRKGRHCG
Sbjct: 66  YRVRKNTEARRKGRHCG 82



 Score = 95.5 bits (227), Expect = 5e-20
 Identities = 44/55 (80%), Positives = 49/55 (89%)
 Frame = +2

Query: 359 EEIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARAIK*R 523
           ++IDRHLYH LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQAEAR  K R
Sbjct: 118 KKIDRHLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVR 172



 Score = 37.1 bits (82), Expect = 0.020
 Identities = 16/26 (61%), Positives = 18/26 (69%)
 Frame = +3

Query: 234 KGSSLWLGKRRSTANARMPQKELWVQ 311
           KG     GKR+ TANARMP K LW+Q
Sbjct: 77  KGRHCGFGKRKGTANARMPTKLLWMQ 102


>AY061217-1|AAL28765.2|  221|Drosophila melanogaster LD16326p
           protein.
          Length = 221

 Score =  155 bits (377), Expect = 4e-38
 Identities = 72/77 (93%), Positives = 75/77 (97%)
 Frame = +1

Query: 22  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 201
           MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 19  MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 78

Query: 202 ARVRKNTEARRKGRHCG 252
            RVRKNTEARRKGRHCG
Sbjct: 79  YRVRKNTEARRKGRHCG 95



 Score = 95.5 bits (227), Expect = 5e-20
 Identities = 44/55 (80%), Positives = 49/55 (89%)
 Frame = +2

Query: 359 EEIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARAIK*R 523
           ++IDRHLYH LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQAEAR  K R
Sbjct: 131 KKIDRHLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVR 185



 Score = 37.1 bits (82), Expect = 0.020
 Identities = 16/26 (61%), Positives = 18/26 (69%)
 Frame = +3

Query: 234 KGSSLWLGKRRSTANARMPQKELWVQ 311
           KG     GKR+ TANARMP K LW+Q
Sbjct: 90  KGRHCGFGKRKGTANARMPTKLLWMQ 115


>AE013599-4000|AAS64772.1|  203|Drosophila melanogaster CG2746-PB,
           isoform B protein.
          Length = 203

 Score =  155 bits (377), Expect = 4e-38
 Identities = 72/77 (93%), Positives = 75/77 (97%)
 Frame = +1

Query: 22  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 201
           MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1   MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60

Query: 202 ARVRKNTEARRKGRHCG 252
            RVRKNTEARRKGRHCG
Sbjct: 61  YRVRKNTEARRKGRHCG 77



 Score = 95.5 bits (227), Expect = 5e-20
 Identities = 44/55 (80%), Positives = 49/55 (89%)
 Frame = +2

Query: 359 EEIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARAIK*R 523
           ++IDRHLYH LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQAEAR  K R
Sbjct: 113 KKIDRHLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVR 167



 Score = 37.1 bits (82), Expect = 0.020
 Identities = 16/26 (61%), Positives = 18/26 (69%)
 Frame = +3

Query: 234 KGSSLWLGKRRSTANARMPQKELWVQ 311
           KG     GKR+ TANARMP K LW+Q
Sbjct: 72  KGRHCGFGKRKGTANARMPTKLLWMQ 97


>AE013599-3999|AAF47305.1|  203|Drosophila melanogaster CG2746-PA,
           isoform A protein.
          Length = 203

 Score =  155 bits (377), Expect = 4e-38
 Identities = 72/77 (93%), Positives = 75/77 (97%)
 Frame = +1

Query: 22  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 201
           MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1   MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60

Query: 202 ARVRKNTEARRKGRHCG 252
            RVRKNTEARRKGRHCG
Sbjct: 61  YRVRKNTEARRKGRHCG 77



 Score = 95.5 bits (227), Expect = 5e-20
 Identities = 44/55 (80%), Positives = 49/55 (89%)
 Frame = +2

Query: 359 EEIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARAIK*R 523
           ++IDRHLYH LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQAEAR  K R
Sbjct: 113 KKIDRHLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVR 167



 Score = 37.1 bits (82), Expect = 0.020
 Identities = 16/26 (61%), Positives = 18/26 (69%)
 Frame = +3

Query: 234 KGSSLWLGKRRSTANARMPQKELWVQ 311
           KG     GKR+ TANARMP K LW+Q
Sbjct: 72  KGRHCGFGKRKGTANARMPTKLLWMQ 97


>X74776-1|CAA52784.1|  203|Drosophila melanogaster ribosomal protein
           L19 protein.
          Length = 203

 Score =  153 bits (370), Expect = 3e-37
 Identities = 71/77 (92%), Positives = 74/77 (96%)
 Frame = +1

Query: 22  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 201
           MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1   MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60

Query: 202 ARVRKNTEARRKGRHCG 252
            RVRKNTEARRK RHCG
Sbjct: 61  YRVRKNTEARRKDRHCG 77



 Score = 95.5 bits (227), Expect = 5e-20
 Identities = 44/55 (80%), Positives = 49/55 (89%)
 Frame = +2

Query: 359 EEIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARAIK*R 523
           ++IDRHLYH LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQAEAR  K R
Sbjct: 113 KKIDRHLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVR 167



 Score = 34.7 bits (76), Expect = 0.11
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +3

Query: 255 GKRRSTANARMPQKELWVQ 311
           GKR+ TANARMP K LW+Q
Sbjct: 79  GKRKGTANARMPTKLLWMQ 97


>L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic
           dynein heavy chian protein.
          Length = 4639

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 109 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 210
           N++  TNSR      IK GLV++   ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137


>BT025964-1|ABG02208.1| 1312|Drosophila melanogaster IP16365p
           protein.
          Length = 1312

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 109 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 210
           N++  TNSR      IK GLV++   ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137


>AE014296-904|AAN11615.1| 3388|Drosophila melanogaster CG7507-PB,
           isoform B protein.
          Length = 3388

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 109 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 210
           N++  TNSR      IK GLV++   ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137


>AE014296-903|AAF47942.3| 4639|Drosophila melanogaster CG7507-PA,
           isoform A protein.
          Length = 4639

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 109 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 210
           N++  TNSR      IK GLV++   ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137


>AY060882-1|AAL28430.1|  222|Drosophila melanogaster GM04269p
           protein.
          Length = 222

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = +2

Query: 14  VSG*VPSSCRRGLQP--LLCDVVKRRCGWIQ 100
           V+  +P   +RG++P  L CD VK   GWI+
Sbjct: 55  VAALIPEFQKRGVKPIALSCDTVKSHKGWIE 85


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,547,029
Number of Sequences: 53049
Number of extensions: 598705
Number of successful extensions: 1980
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1978
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)