Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30933
(644 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 33 0.13
AF026213-2|AAB71304.2| 191|Caenorhabditis elegans Hypothetical ... 31 0.70
Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical p... 30 1.6
AL031633-9|CAA21023.1| 636|Caenorhabditis elegans Hypothetical ... 30 1.6
Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z66567-5|CAA91492.4| 757|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z49936-2|CAA90181.1| 586|Caenorhabditis elegans Hypothetical pr... 28 4.9
AY834228-1|AAV91314.1| 589|Caenorhabditis elegans Toll and inte... 28 4.9
AL132860-26|CAB60511.2| 700|Caenorhabditis elegans Hypothetical... 28 4.9
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 28 6.5
Z81079-3|CAB03083.2| 588|Caenorhabditis elegans Hypothetical pr... 28 6.5
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 28 6.5
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 28 6.5
AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical... 28 6.5
AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical... 28 6.5
Z68220-4|CAA92489.2| 408|Caenorhabditis elegans Hypothetical pr... 27 8.6
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 27 8.6
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 27 8.6
U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily ass... 27 8.6
AF163019-1|AAD49324.1| 1312|Caenorhabditis elegans trithorax-rel... 27 8.6
AF039718-1|AAB96746.1| 1312|Caenorhabditis elegans Abnormal cell... 27 8.6
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 33.5 bits (73), Expect = 0.13
Identities = 30/129 (23%), Positives = 51/129 (39%)
Frame = +2
Query: 245 VQPLPLLTRHIQLPPENQTTQADRRQESLPPGQKAHPVPYRRDASPNAGPTSVQESTALC 424
+ P P ++ H P ++Q Q ++ PP P PY RD P P V E+ +
Sbjct: 456 ISPQPQVSHHHHQPQQHQQHQPQQQYYPSPP---PPPQPY-RDPEPVFNPVQVYETRPIS 511
Query: 425 G*FLVDASDAPVSLQRVSGHEQERARLQQSHEIGNQLESNSPQYAEPKDSDSSSYERPAS 604
L D D P S Q + ++ +++ ++ S Q E + D +R +
Sbjct: 512 A--LSDQIDQPPSQQAPTSWKRTYI-VERPRDVAKNEIITSDQLLEKEAYDVDLLKRRET 568
Query: 605 MTDLPIMVP 631
+ P P
Sbjct: 569 FVEKPEEAP 577
>AF026213-2|AAB71304.2| 191|Caenorhabditis elegans Hypothetical
protein F08F1.4a protein.
Length = 191
Score = 31.1 bits (67), Expect = 0.70
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = -2
Query: 475 DTLERDRSIGRVDEKSSAECCRLLDRGRASVWGGVSSIRDRVCLL 341
+ + DRS+G ++++S CRL + +GG++ +++ CL+
Sbjct: 145 ELISNDRSLGVIEDRSHKAICRLGRWYSLNKYGGLTVVKEVACLV 189
>Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical
protein F54E12.2 protein.
Length = 1091
Score = 29.9 bits (64), Expect = 1.6
Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
Frame = +3
Query: 246 YNLSHSSLDTFNSHRKIKRPKLIGDKKVYRPVRRHTLSRID-ETPPQTLARPRSKSLQHS 422
Y S SS SH + + + K P+ + D + Q R KSL+ +
Sbjct: 93 YGSSRSSSQNHESHDRSRSFVQYDENKPLTPISKKLAESTDLRSKAQLRERLLRKSLKQN 152
Query: 423 ADDFSSTRPMLRSRSNVSADTSRSVPV 503
A+D S TR SAD +S V
Sbjct: 153 AEDSSPTRAASGGGWGSSADVKKSPEV 179
>Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical
protein F54E12.2 protein.
Length = 1091
Score = 29.9 bits (64), Expect = 1.6
Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
Frame = +3
Query: 246 YNLSHSSLDTFNSHRKIKRPKLIGDKKVYRPVRRHTLSRID-ETPPQTLARPRSKSLQHS 422
Y S SS SH + + + K P+ + D + Q R KSL+ +
Sbjct: 93 YGSSRSSSQNHESHDRSRSFVQYDENKPLTPISKKLAESTDLRSKAQLRERLLRKSLKQN 152
Query: 423 ADDFSSTRPMLRSRSNVSADTSRSVPV 503
A+D S TR SAD +S V
Sbjct: 153 AEDSSPTRAASGGGWGSSADVKKSPEV 179
>AL031633-9|CAA21023.1| 636|Caenorhabditis elegans Hypothetical
protein Y39A1A.12 protein.
Length = 636
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 318 DKKVYRPVRRHTLSRIDETPPQTLARPRSKSLQHSADDFSSTRPMLR-SRSNVSADTSR 491
DK+ R R T +R++ETP + LAR SK+ S S+++ + + S+S + SR
Sbjct: 105 DKENRRVTRSRTPTRLEETPSKRLARELSKA---SVSKVSTSKTLFKESKSPRKVEISR 160
>Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical
protein C04A11.3 protein.
Length = 1228
Score = 28.7 bits (61), Expect = 3.7
Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 2/114 (1%)
Frame = +2
Query: 284 PPENQTTQADRRQESLPPGQKAHPVPYRRDASPNAGPTSVQESTALCG*FLVDASDAPVS 463
P + Q + R + + P R SP+ +S ES L L A A
Sbjct: 513 PQKEQLFEHSIRDTIMASRSRPSLSPQLRQLSPSESASSFDESVNLSFHKLEPAEHAGY- 571
Query: 464 LQRVSGHEQERARLQQSHEIGNQLESNSPQYAEPKDSDSSSYERPAS--MTDLP 619
V H+Q Q +E N + + Q E S+S +RP S +T++P
Sbjct: 572 ---VMAHQQMEKTTAQLNERANAVSNIRTQMEEKIADSSNSKQRPISQPITEIP 622
>Z66567-5|CAA91492.4| 757|Caenorhabditis elegans Hypothetical
protein ZK455.8a protein.
Length = 757
Score = 28.3 bits (60), Expect = 4.9
Identities = 22/98 (22%), Positives = 35/98 (35%)
Frame = +2
Query: 281 LPPENQTTQADRRQESLPPGQKAHPVPYRRDASPNAGPTSVQESTALCG*FLVDASDAPV 460
LP ++T S + HP+ Y + Q S + +
Sbjct: 49 LPIRSETDLISNISASSMMPLENHPLIYSNPEFTTVRFLTPQASVQTVNAGAASVAPSEA 108
Query: 461 SLQRVSGHEQERARLQQSHEIGNQLESNSPQYAEPKDS 574
S+ + + +ARLQ EI NQ QYA K++
Sbjct: 109 SVNAENSRKPSKARLQSEMEIRNQHYQKQKQYASTKET 146
>Z49936-2|CAA90181.1| 586|Caenorhabditis elegans Hypothetical
protein F13B10.1b protein.
Length = 586
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 569 DSDSSSYERPASMTDLPIMV 628
+S+ SS RP+S+TDLPI++
Sbjct: 66 NSNCSSLSRPSSLTDLPILL 85
>AY834228-1|AAV91314.1| 589|Caenorhabditis elegans Toll and
interleukin 1 receptordomain protein isoform f protein.
Length = 589
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 569 DSDSSSYERPASMTDLPIMV 628
+S+ SS RP+S+TDLPI++
Sbjct: 66 NSNCSSLSRPSSLTDLPILL 85
>AL132860-26|CAB60511.2| 700|Caenorhabditis elegans Hypothetical
protein Y56A3A.32 protein.
Length = 700
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 479 GHEQERARLQQSHEIGNQLESNSPQYAEPKDSDSSSYERPA 601
GH A+ + HE ++ + ++AEP+ + + E+PA
Sbjct: 105 GHGHGHAKHSKKHEEKHEQKHEEKEHAEPEKKEEAKPEKPA 145
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
Frame = +2
Query: 245 VQPLPLLTRHIQLPPENQTTQADRRQES--------LPPGQKAHPVPYRRDASPNAGPTS 400
VQ P + Q PP+ QA Q++ PP QKA PV ++ ++P P++
Sbjct: 386 VQQAPSSQQATQAPPKPAPQQAPPVQQNPPKPTPSPAPPAQKAQPVTQQQASAPPTSPSA 445
>Z81079-3|CAB03083.2| 588|Caenorhabditis elegans Hypothetical
protein F39H11.3 protein.
Length = 588
Score = 27.9 bits (59), Expect = 6.5
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 482 HEQERARLQQSHEIGNQLESNSPQYAEPK 568
H+Q++ ++QQ ++G Q PQ +P+
Sbjct: 387 HQQQQVQMQQQPQMGQQQMMGQPQMVQPQ 415
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 281 LPPENQTTQADRRQESLPPGQKAHPVPYRRDASPNAGPTSVQE-STA 418
LPP++ ++Q+ PP + P PY +S + P + E STA
Sbjct: 377 LPPQHHQQHQQQQQQQQPPLLQNTPQPYYYGSSVSTTPRNYDEMSTA 423
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 281 LPPENQTTQADRRQESLPPGQKAHPVPYRRDASPNAGPTSVQE-STA 418
LPP++ ++Q+ PP + P PY +S + P + E STA
Sbjct: 279 LPPQHHQQHQQQQQQQQPPLLQNTPQPYYYGSSVSTTPRNYDEMSTA 325
>AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18b protein.
Length = 586
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +3
Query: 246 YNLSHSSLDTFNSHRKIKRPKLIGDKKVYRPVR-RHTLSRID-ETPPQTLARPRSKSLQH 419
+ S SS ++ K+ K+ +KKV P + + SR ETP RS S+ H
Sbjct: 97 HGASSSSGKDREKEKEKKKNKIYEEKKVKTPKPPKSSSSRYSSETPTSHHHHHRSNSISH 156
Query: 420 SADDFSSTRP 449
S+D ++P
Sbjct: 157 SSDVIRPSQP 166
>AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18a protein.
Length = 946
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +3
Query: 246 YNLSHSSLDTFNSHRKIKRPKLIGDKKVYRPVR-RHTLSRID-ETPPQTLARPRSKSLQH 419
+ S SS ++ K+ K+ +KKV P + + SR ETP RS S+ H
Sbjct: 457 HGASSSSGKDREKEKEKKKNKIYEEKKVKTPKPPKSSSSRYSSETPTSHHHHHRSNSISH 516
Query: 420 SADDFSSTRP 449
S+D ++P
Sbjct: 517 SSDVIRPSQP 526
>Z68220-4|CAA92489.2| 408|Caenorhabditis elegans Hypothetical
protein T20D3.7 protein.
Length = 408
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +2
Query: 290 ENQTTQADRRQESLPPGQKAHPVPYRRDASPNAGPTSVQEST 415
E QTT Q+ P HP P + P +G TS +++
Sbjct: 364 EKQTTSIPGTQKFTAPAPVEHPKPESPRSDPKSGSTSPDDNS 405
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 333 RPVRRHTLSRIDETPPQTLARPRSKSLQHSADDFSSTRPMLRSRSNVSAD 482
RPVRR TP + R RS++ + + T P+ SRS +++
Sbjct: 358 RPVRRSRSRSRSRTPNRNWTRARSRTRSQAKSSSTLTWPLSPSRSRSNSN 407
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Frame = +3
Query: 303 PKLIGDKKVYRPVRRH----TLSRIDETP---PQTLARPRSKSLQHSADDFSSTRPMLRS 461
P +G K + H T S + TP PQT A P + +A ++T+P++ +
Sbjct: 509 PTTVGTSKQTNTISPHLSTITGSIVTSTPTMAPQTSASPTTTPTHTTASQPTTTKPVVTT 568
Query: 462 RSNVSADTSRSVPV 503
S + + +VPV
Sbjct: 569 NSVTPSTGTTTVPV 582
>U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily
assigned gene nameprotein 177 protein.
Length = 1667
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 453 LRSRSNVSADTSRSVPVCNKVTRLVTSWRATAP 551
L + N+++D SR V ++ RLV W TAP
Sbjct: 345 LVTHDNLTSDASRESSV--RIARLVNKWNQTAP 375
>AF163019-1|AAD49324.1| 1312|Caenorhabditis elegans
trithorax-related protein LIN-59 protein.
Length = 1312
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 6/38 (15%)
Frame = +2
Query: 545 SPQYAEPKDSDSSSYER------PASMTDLPIMVPIDQ 640
SP YA D D ++ PA TD+P++ P+D+
Sbjct: 187 SPSYAMMNDVDIGDHDDEEDDDGPADFTDMPLLKPVDE 224
>AF039718-1|AAB96746.1| 1312|Caenorhabditis elegans Abnormal cell
lineage protein 59 protein.
Length = 1312
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 6/38 (15%)
Frame = +2
Query: 545 SPQYAEPKDSDSSSYER------PASMTDLPIMVPIDQ 640
SP YA D D ++ PA TD+P++ P+D+
Sbjct: 187 SPSYAMMNDVDIGDHDDEEDDDGPADFTDMPLLKPVDE 224
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,726,699
Number of Sequences: 27780
Number of extensions: 180762
Number of successful extensions: 891
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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