Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30931
         (664 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3XNQ5 Cluster: Putative uncharacterized protein; n=1; ...    37   0.38 
UniRef50_A0E7C5 Cluster: Chromosome undetermined scaffold_80, wh...    34   3.5  
UniRef50_Q18Y03 Cluster: Putative uncharacterized protein precur...    33   4.6  
UniRef50_A7RKD5 Cluster: Predicted protein; n=2; Nematostella ve...    33   6.1  
UniRef50_Q7RJL1 Cluster: Putative uncharacterized protein PY0324...    33   8.1  

>UniRef50_A3XNQ5 Cluster: Putative uncharacterized protein; n=1;
           Leeuwenhoekiella blandensis MED217|Rep: Putative
           uncharacterized protein - Leeuwenhoekiella blandensis
           MED217
          Length = 109

 Score = 37.1 bits (82), Expect = 0.38
 Identities = 22/62 (35%), Positives = 35/62 (56%)
 Frame = -2

Query: 486 CNKNEIICKSKNYMITFKNTVELQLEIFYCFHEILRHAPSLCSNTQIYDVIINRQYFEVF 307
           CN N +I K K+  I+F+N V    + FY +  + ++   LCSNT+  + ++   Y E F
Sbjct: 45  CN-NRLIAKQKDPNISFEN-VSYDNKEFYNYI-LSKNGDDLCSNTKKLNEVVTEHYKEFF 101

Query: 306 KK 301
           KK
Sbjct: 102 KK 103


>UniRef50_A0E7C5 Cluster: Chromosome undetermined scaffold_80, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_80,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1615

 Score = 33.9 bits (74), Expect = 3.5
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = +1

Query: 424 YGIFKRNHIIFAFAYNLIFVAFEAGLSTYVFRTLTIPRECG 546
           YGIFK N  I+ F Y+ + V ++ GL   V     IP  CG
Sbjct: 282 YGIFKFNSGIYKFYYSNLAVPYQIGLKISVVTYNDIPINCG 322


>UniRef50_Q18Y03 Cluster: Putative uncharacterized protein
           precursor; n=2; Desulfitobacterium hafniense|Rep:
           Putative uncharacterized protein precursor -
           Desulfitobacterium hafniense (strain DCB-2)
          Length = 267

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 18/61 (29%), Positives = 34/61 (55%)
 Frame = +1

Query: 481 VAFEAGLSTYVFRTLTIPRECGRVHGPSVVKWLL*PIDINNVNDIRKTS*CILLTWLKHA 660
           +AF AGL+T   RTL +    GR+ G +V+ ++   + + N+N +  T   ++L ++   
Sbjct: 153 IAFIAGLTTIPIRTLVLISVAGRLPGYAVLTFMGNGLALENLNPVVVTLVALILIFILGW 212

Query: 661 W 663
           W
Sbjct: 213 W 213


>UniRef50_A7RKD5 Cluster: Predicted protein; n=2; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 531

 Score = 33.1 bits (72), Expect = 6.1
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = -2

Query: 576 PLNNRWTVNSSTFSWYC*CPENISR*SGFECNKNEIICKSKN 451
           P  N  T  SS F++ C CP+N    SG  C+ +   CKS N
Sbjct: 378 PCLNGGTCKSSLFNYTCACPDNF---SGINCHLDVDECKSNN 416


>UniRef50_Q7RJL1 Cluster: Putative uncharacterized protein PY03248;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY03248 - Plasmodium yoelii
           yoelii
          Length = 760

 Score = 32.7 bits (71), Expect = 8.1
 Identities = 15/57 (26%), Positives = 29/57 (50%)
 Frame = -2

Query: 486 CNKNEIICKSKNYMITFKNTVELQLEIFYCFHEILRHAPSLCSNTQIYDVIINRQYF 316
           C K  I+CK+ NY   FK  +      +  ++ ILR+  +  +N  I+ ++  + +F
Sbjct: 683 CRKKYIVCKNDNYTTIFKKNL---YHFYNNYNTILRNKTNFENNAMIFFLLFKKGHF 736


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 537,493,731
Number of Sequences: 1657284
Number of extensions: 9577845
Number of successful extensions: 20554
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20546
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)