Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30930
         (802 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    26   0.30 
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    24   1.6  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   2.8  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   2.8  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   2.8  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   2.8  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   2.8  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   2.8  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   2.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.0  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   5.0  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   5.0  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   8.7  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = -3

Query: 665 LMSAPPQSSIVLSSLTYSMTTSQGYESMVAGAPPTILSPTAMSRPQHFPSGL 510
           + +  P + IVL   T+    +   ES + G PP  +S  A + P    +GL
Sbjct: 284 MSNGAPSAKIVLGLPTFGRAWAMDDESDINGTPPLHISGPAEAGPLTKDAGL 335


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -3

Query: 689 PAVSTYFPLMSAPPQSSIVLSSLTYSMTTSQGYESMVAGAPPTI 558
           PA ST    +S+P  S+   SS   + T +   +S  +  PP I
Sbjct: 157 PATSTTSQNLSSPASSTSSTSSTEKAGTNNNNSKSSQSSNPPQI 200


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -3

Query: 689 PAVSTYFPLMSAPPQSSIVLSSLTYSMTTSQGYESMVAGAPPTI 558
           PA ST    +S+P  S+   SS   + T +   +S  +  PP I
Sbjct: 157 PATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQI 200


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -3

Query: 689 PAVSTYFPLMSAPPQSSIVLSSLTYSMTTSQGYESMVAGAPPTI 558
           PA ST    +S+P  S+   SS   + T +   +S  +  PP I
Sbjct: 157 PATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQI 200


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -3

Query: 689 PAVSTYFPLMSAPPQSSIVLSSLTYSMTTSQGYESMVAGAPPTI 558
           PA ST    +S+P  S+   SS   + T +   +S  +  PP I
Sbjct: 157 PATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQI 200


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -3

Query: 689 PAVSTYFPLMSAPPQSSIVLSSLTYSMTTSQGYESMVAGAPPTI 558
           PA ST    +S+P  S+   SS   + T +   +S  +  PP I
Sbjct: 157 PATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQI 200


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -3

Query: 689 PAVSTYFPLMSAPPQSSIVLSSLTYSMTTSQGYESMVAGAPPTI 558
           PA ST    +S+P  S+   SS   + T +   +S  +  PP I
Sbjct: 113 PATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQI 156


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -3

Query: 689 PAVSTYFPLMSAPPQSSIVLSSLTYSMTTSQGYESMVAGAPPTI 558
           PA ST    +S+P  S+   SS   + T +   +S  +  PP I
Sbjct: 157 PATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQI 200


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -3

Query: 689 PAVSTYFPLMSAPPQSSIVLSSLTYSMTTSQGYESMVAGAPPTI 558
           PA ST    +S+P  S+   SS   + T +   +S  +  PP I
Sbjct: 157 PATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQI 200


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 572  APPTILSPTAMSRPQH 525
            APP++ S T +  PQH
Sbjct: 1795 APPSVHSSTVVPPPQH 1810


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -1

Query: 487 LAGVHPLRSGGRGHYRRLWCSNTAYALLF 401
           + GV P+   G+G     W S+T+    F
Sbjct: 62  IMGVMPIERSGKGRTTFRWLSSTSIYAYF 90


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -1

Query: 487 LAGVHPLRSGGRGHYRRLWCSNTAYALLF 401
           + GV P+   G+G     W S+T+    F
Sbjct: 62  IMGVMPIERSGKGRTTFRWLSSTSIYAYF 90


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 199 PSKMRSS*GTPNAAPR 246
           P+K+++S  +P AAPR
Sbjct: 201 PTKVKASKASPAAAPR 216


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,064
Number of Sequences: 336
Number of extensions: 4863
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)