Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30930
(802 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 40 0.003
U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 38 0.011
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 36 0.034
AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 35 0.078
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ... 31 0.73
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 30 1.7
AF025460-2|AAF02169.3| 545|Caenorhabditis elegans Prion-like-(q... 30 2.2
AC024847-7|AAF60856.2| 261|Caenorhabditis elegans Hypothetical ... 30 2.2
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 29 3.9
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 29 3.9
U41108-2|AAQ23121.2| 639|Caenorhabditis elegans Tropomodulin pr... 29 3.9
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 29 5.1
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 5.1
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 5.1
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p... 29 5.1
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 29 5.1
D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep... 29 5.1
AL132862-15|CAB60549.1| 703|Caenorhabditis elegans Hypothetical... 29 5.1
AF025451-10|AAB71207.1| 343|Caenorhabditis elegans Hypothetical... 28 6.8
AC024790-2|AAF60638.1| 220|Caenorhabditis elegans Ground-like (... 28 6.8
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 28 6.8
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 8.9
AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical ... 28 8.9
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +1
Query: 541 IAVGDKIVGGAPATIDSYPWLVVIEYVRLERTMLLCGGALISGKYVLTAGHC 696
+ + +++GG+ ++ S+PW V + RL CGG+LI +VLTA HC
Sbjct: 52 VTLDHRLIGGSESSPHSWPWTVQL-LSRLGHHR--CGGSLIDPNFVLTAAHC 100
>U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like
protease protein 6 protein.
Length = 360
Score = 37.5 bits (83), Expect = 0.011
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +1
Query: 529 CGRDIAVGDKIVGGAPATIDSYPWLVVIE-YVRL----ERTMLLCGGALISGKYVLTAGH 693
CG+++ KI G A ID PW V I Y + E C G L S +++LTA H
Sbjct: 33 CGKNVK--SKIFNGRKAEIDEAPWAVRINTYTNVKNIDETWSKHCSGTLTSPRHILTATH 90
Query: 694 C 696
C
Sbjct: 91 C 91
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 35.9 bits (79), Expect = 0.034
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Frame = +1
Query: 487 ERDDCHPPNPEGKCCGRDIAVGDKIVGGAPATIDS----YPWLVVIEY-VRLERTMLLCG 651
E D + N + + CGR ++ A + PW V I R ++CG
Sbjct: 4 ENVDINSNNLDDELCGRQSTYTSFMLTDAAGNTGNPTHLAPWAVQIRVKARKGDFEVICG 63
Query: 652 GALISGKYVLTAGHC 696
G LI+ K+VLTA HC
Sbjct: 64 GTLITLKHVLTAAHC 78
>AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like
protease protein 7 protein.
Length = 522
Score = 34.7 bits (76), Expect = 0.078
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 556 KIVGGAPATIDSYPWLVVIE-YVRLERTMLLCGGALISGKYVLTAGHCVKG 705
K+ G A+ PW V Y + E++ C G ++S +++L A HC G
Sbjct: 162 KVYNGRDASQSEAPWSVFTYLYSKDEQSATTCTGTIVSPRHILIATHCFAG 212
>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
protein Y38C9A.1 protein.
Length = 1484
Score = 31.5 bits (68), Expect = 0.73
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = -3
Query: 689 PAVSTYFPLMSAP-PQSSIVLSSLTYSMTTSQGYESMVAGAPPTILSPTAMSRPQHF 522
P +T P + AP P SSI +S + S +++ APP I++P A + P H+
Sbjct: 1057 PGSTTTAPTVQAPAPSSSIPNTSTSIPKAPSA---PVLSAAPPKIVAPAAPAAPTHY 1110
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -2
Query: 615 LDDHQPRIRVDGCGRTTNDFVSDGYVSAATLPFRIRGVAVISLWQA 478
LDDH IRVD G +F D + LPF I A+I+ + A
Sbjct: 225 LDDHV--IRVDKVGSKKKEFGKDMAIFVGNLPFEITEDALITFFSA 268
>AF025460-2|AAF02169.3| 545|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 41
protein.
Length = 545
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -3
Query: 689 PAVSTYFPLMSAPPQSSIVLSS-LTYSMTTSQGYESMVAGAPPTILSPTAMSRPQ 528
P ++ P++ AP Q + ++ T TTSQ +S+ PP + P+A ++ Q
Sbjct: 95 PPPASSAPIVGAPRQGATPQAAPATTPATTSQHQQSIATPKPPVVRPPSAATQQQ 149
>AC024847-7|AAF60856.2| 261|Caenorhabditis elegans Hypothetical
protein Y65B4BR.2 protein.
Length = 261
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Frame = -3
Query: 674 YFPLMSAPPQSSIVLSS----LTYSMTTSQGYESMVAGAPPTILSPTAMSRPQ--HFPSG 513
YF ++ P ++ S + + T++GY SMV P +L T R Q FP
Sbjct: 121 YFDMVLQTPYTATFTSKQYGVINNDVVTNEGYGSMVGPEPGAVLITTGSERDQCPFFPVR 180
Query: 512 LGG 504
+GG
Sbjct: 181 IGG 183
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 634 TMLLCGGALISGKYVLTAGHCV 699
T +CGG LI+ V+T+ HCV
Sbjct: 42 TTNVCGGVLIAPSIVITSAHCV 63
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/47 (23%), Positives = 23/47 (48%)
Frame = +1
Query: 556 KIVGGAPATIDSYPWLVVIEYVRLERTMLLCGGALISGKYVLTAGHC 696
++VGG ++PW + + CG +++ +++TA HC
Sbjct: 26 RVVGGFETVPGAFPWTAALRNKATKAHH--CGASILDKTHLITAAHC 70
>U41108-2|AAQ23121.2| 639|Caenorhabditis elegans Tropomodulin
protein 2, isoform b protein.
Length = 639
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -3
Query: 725 VPTSKIAPFTQ*PAVSTYFPLMS-APPQSSIVLSSLTYSMTTSQGYESMVAGAPPTILSP 549
VP S ++P + P+++ APP+S+I++ L++ + + E PP + P
Sbjct: 290 VPKSLVSPEPKPSLAPKAAPVIATAPPKSTILMKQLSFQRASRESEEDTEFVPPPAVPEP 349
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = -3
Query: 659 SAPPQSSIVLSSLTYSMTTSQGYESMVAGAPPTIL-SPTAMSRPQHFPSGLGGWQSSRSG 483
S+P SSI S+L + +++ S + P +L S T S FPS + S G
Sbjct: 33 SSPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQSSSGTFPSSVAS-SPSTVG 91
Query: 482 RRAPASVWGSWSLPSTV 432
+ A+ S++ ST+
Sbjct: 92 STSGAASSSSYATVSTI 108
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = -3
Query: 659 SAPPQSSIVLSSLTYSMTTSQGYESMVAGAPPTIL-SPTAMSRPQHFPSGLGGWQSSRSG 483
S+P SSI S+L + +++ S + P +L S T S FPS + S G
Sbjct: 240 SSPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQSSSGTFPSSVAS-SPSTVG 298
Query: 482 RRAPASVWGSWSLPSTV 432
+ A+ S++ ST+
Sbjct: 299 STSGAASSSSYATVSTI 315
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = -3
Query: 659 SAPPQSSIVLSSLTYSMTTSQGYESMVAGAPPTIL-SPTAMSRPQHFPSGLGGWQSSRSG 483
S+P SSI S+L + +++ S + P +L S T S FPS + S G
Sbjct: 240 SSPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQSSSGTFPSSVAS-SPSTVG 298
Query: 482 RRAPASVWGSWSLPSTV 432
+ A+ S++ ST+
Sbjct: 299 STSGAASSSSYATVSTI 315
>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
protein 68 protein.
Length = 5079
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 622 RLERTMLLCGGALISGKYVLTAGHCVKGAILDVGTPKTVRLG 747
R E T +CGG +LTAG+ +K +D+G+ ++LG
Sbjct: 960 RAEATYAVCGGKWYFEFEILTAGY-MKIGWMDIGSTPEIQLG 1000
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = -3
Query: 647 QSSIVLSSLTYSMTTSQGYESMVAGAPPTILSPTAMSRPQHFPS 516
Q +++ +TYS T+ Q + P + +P SR HFP+
Sbjct: 84 QPPLIIKPVTYSETSYQPIDIYSTTQTPILTTPPYPSRISHFPT 127
>D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor
protein.
Length = 5071
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 622 RLERTMLLCGGALISGKYVLTAGHCVKGAILDVGTPKTVRLG 747
R E T +CGG +LTAG+ +K +D+G+ ++LG
Sbjct: 1081 RAEATYAVCGGKWYFEFEILTAGY-MKIGWMDIGSTPEIQLG 1121
>AL132862-15|CAB60549.1| 703|Caenorhabditis elegans Hypothetical
protein Y73F8A.21 protein.
Length = 703
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -3
Query: 653 PPQSSIVLSSLTYSMTTSQGYESMVAGAPPTILSPTAMSRPQHF 522
P S SS Y+ GY + AG P + P +PQ+F
Sbjct: 575 PTVPSSTTSSTFYNFPPPPGYPPLNAGYTPNVNYPNLYQQPQYF 618
>AF025451-10|AAB71207.1| 343|Caenorhabditis elegans Hypothetical
protein C24H12.11 protein.
Length = 343
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 453 VVTTVDCGAVTQHMLCCSDP*QTDPRT*FRFA 358
++ T+ C + T H L D TDPRT F F+
Sbjct: 302 LLATILCASDTMHFLVWHDRFPTDPRTFFPFS 333
>AC024790-2|AAF60638.1| 220|Caenorhabditis elegans Ground-like (grd
related) protein 5 protein.
Length = 220
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -3
Query: 752 YSPRRTVFGVPTSKIAPFTQ*PAVSTYFPLMSAPPQSSIVLSSLTYS 612
Y P+++ FG + APF PA F + SAPPQ + Y+
Sbjct: 69 YQPQQSSFGSSYAAPAPFAAQPA---QFAVQSAPPQPIVAPPPQAYA 112
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 28.3 bits (60), Expect = 6.8
Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 3/108 (2%)
Frame = -3
Query: 749 SPRRTVFGVPTSKIAPFTQ*PAVSTYFPLMSAPPQSSIVLSSLTYSMTTSQGYESMVAGA 570
SP+ V V K PF PA S P + P + ++ + T V
Sbjct: 272 SPKAPVASVAPVKPKPFVARPAPSFGKPRAAVAPARAPQITQRAPAATRPSTSAIRVTPI 331
Query: 569 PPTIL---SPTAMSRPQHFPSGLGGWQSSRSGRRAPASVWGSWSLPST 435
P ++ +PT + P G+ Q+S SG AP + ++P+T
Sbjct: 332 APNVVRNGAPTTAQQAPRKPIGIARPQTS-SGIAAPGAPRSRIAMPTT 378
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 27.9 bits (59), Expect = 8.9
Identities = 21/82 (25%), Positives = 37/82 (45%)
Frame = -3
Query: 680 STYFPLMSAPPQSSIVLSSLTYSMTTSQGYESMVAGAPPTILSPTAMSRPQHFPSGLGGW 501
ST P + PQ++ + S +Q + PPT S +A + P+ + G
Sbjct: 579 STPAPSTTPAPQAASSSQAAPTSGANTQPATPSASNQPPTPASASASTTLHVEPASVAG- 637
Query: 500 QSSRSGRRAPASVWGSWSLPST 435
S++G RAP++ G + P +
Sbjct: 638 -GSQAGSRAPSAGPGPSATPDS 658
>AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical
protein Y106G6D.7 protein.
Length = 948
Score = 27.9 bits (59), Expect = 8.9
Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Frame = -3
Query: 773 TARVVVLYSPRRTVFGVPTSKIAPFTQ*PAVSTYFPLMSAPPQSSIVLSSLTYSMTTSQG 594
T R ++ +P+ P APFT P+ P + PP + +
Sbjct: 331 TGRKTLMPTPQAPFQNAP----APFTNGPSDDVNRPFQTGPPGNLGRNGPPPFQAGVPPP 386
Query: 593 YESMVAGAPPTILSPTAMSRP--QHFPSGLGG 504
G P I P AM RP Q+FP G GG
Sbjct: 387 VIQNNMGRP--IAPPAAMVRPPPQNFPGGAGG 416
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +3
Query: 651 RSAHQREVRAHCRSLRERSDLGCRHAENSASRRVQHDDPGRDCVSVS 791
RS +R+ R RS RS R S RR +H DP R CV V+
Sbjct: 568 RSPLRRDNRDRSRS---RSPPRRRRRSRSPRRREEHTDPTRWCVQVT 611
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,055,039
Number of Sequences: 27780
Number of extensions: 496481
Number of successful extensions: 1433
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1432
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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