Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30930
         (802 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    44   2e-06
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    24   1.9  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   3.3  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   4.4  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   4.4  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 44.0 bits (99), Expect = 2e-06
 Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
 Frame = +1

Query: 556 KIVGGAPATIDSYPWLVVIEYVRLERTMLLCGGALISGKYVLTAGHCVKGAILDVGTPK- 732
           +IVGG    I+ +P +  I+  R     ++CG  +IS +YVLTA HC    I+D  T K 
Sbjct: 160 RIVGGTNTGINEFPMMAGIK--RTYEPGMICGATIISKRYVLTAAHC----IIDENTTKL 213

Query: 733 TVRLGEYNTTTR 768
            + +GE++ +++
Sbjct: 214 AIVVGEHDWSSK 225


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = +3

Query: 621 EAREDDAALWRSAHQREVRAHCRSLRERSDLGCRHAENSASRRVQHDD 764
           E+RE+ A     A +RE   HC   +E       H +   S+ + H D
Sbjct: 762 ESREEKATTSLEAEKREKSEHCEKGKEYY-AASFHTDIGNSQSLAHQD 808


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = -3

Query: 749 SPRRTVFGVPTSKIAPFTQ*PAVSTYFPLMSAPPQS 642
           SP R   GVPTS I   T   +   Y   +  PP+S
Sbjct: 397 SPPRGPGGVPTSVIQAATSSVSDDLYLLELGFPPRS 432


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 52  FGHSSWLFWRSRPKVLLHNHAGHRTDL 132
           FG S+W +   R    LH  A  + DL
Sbjct: 168 FGGSAWSWREERQAYYLHQFAPEQPDL 194


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 52  FGHSSWLFWRSRPKVLLHNHAGHRTDL 132
           FG S+W +   R    LH  A  + DL
Sbjct: 168 FGGSAWSWREERQAYYLHQFAPEQPDL 194


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 248,758
Number of Sequences: 438
Number of extensions: 5581
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)