Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30929X
         (560 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   1.8  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   1.8  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   2.4  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   2.4  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   7.2  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   9.6  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   9.6  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   9.6  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   9.6  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   9.6  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = -2

Query: 322 TYHIPAYQSVSVPNMRMRTRERKIAIGTRSSNAF 221
           T+ +P Y + S P  ++   + +I       NAF
Sbjct: 34  TFRVPTYGTTSHPTSKLVPPDERITYSWTEINAF 67


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = -2

Query: 322 TYHIPAYQSVSVPNMRMRTRERKIAIGTRSSNAF 221
           T+ +P Y + S P  ++   + +I       NAF
Sbjct: 34  TFRVPTYGTTSHPTSKLVPPDERITYSWTEINAF 67


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = -2

Query: 307 AYQSVSVPNMRMRTRERKIAIGTRSSNAFVFRRQIFHFEQINRILVIFFL 158
           +Y S+ +  +R RTR       TRSS AF+ + ++   +    I+++FF+
Sbjct: 238 SYASILL-EIRRRTRNPYGDSVTRSSLAFLGKAKVRTLKMTIIIVLVFFV 286


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = -2

Query: 307 AYQSVSVPNMRMRTRERKIAIGTRSSNAFVFRRQIFHFEQINRILVIFFL 158
           +Y S+ +  +R RTR       TRSS AF+ + ++   +    I+++FF+
Sbjct: 238 SYASILL-EIRRRTRNPYGDSVTRSSLAFLGKAKVRTLKMTIIIVLVFFV 286


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 116 TIPLVGEIEELQTLE 160
           TIPL  E EELQ ++
Sbjct: 307 TIPLTKEEEELQEMQ 321


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 459 QIRSRTSMFPYSLDYFHKSF 400
           Q RSRT+   + LD   K+F
Sbjct: 220 QRRSRTTFTAHQLDELEKAF 239


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/38 (18%), Positives = 21/38 (55%)
 Frame = +1

Query: 184 LFAQSERFVFEIQKH*TNASRWQFFFRAFSYAYLERLL 297
           +  Q+ + V  ++ + + +  + +FF   SY+++  L+
Sbjct: 169 ILMQTNKLVLALECNNSTSEGFDYFFGKMSYSHIFSLM 206


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/38 (18%), Positives = 21/38 (55%)
 Frame = +1

Query: 184 LFAQSERFVFEIQKH*TNASRWQFFFRAFSYAYLERLL 297
           +  Q+ + V  ++ + + +  + +FF   SY+++  L+
Sbjct: 169 ILMQTNKLVLALECNNSTSEGFDYFFGKMSYSHIFSLM 206


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/38 (18%), Positives = 21/38 (55%)
 Frame = +1

Query: 184 LFAQSERFVFEIQKH*TNASRWQFFFRAFSYAYLERLL 297
           +  Q+ + V  ++ + + +  + +FF   SY+++  L+
Sbjct: 169 ILMQTNKLVLALECNNSTSEGFDYFFGKMSYSHIFSLM 206


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 351 IFRIFCYFVKLIIFLLISQ*AFQICV 274
           IF +    +  + FL+I+Q  F ICV
Sbjct: 239 IFGLGLLLMFAVSFLIITQVIFVICV 264


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,331
Number of Sequences: 336
Number of extensions: 2651
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)