Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30929X
(560 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81039-6|CAB02772.1| 284|Caenorhabditis elegans Hypothetical pr... 42 2e-04
U64845-2|AAC48031.2| 980|Caenorhabditis elegans Hypothetical pr... 32 0.25
Z68161-11|CAA92300.1| 347|Caenorhabditis elegans Hypothetical p... 32 0.32
Z68159-12|CAA92289.1| 347|Caenorhabditis elegans Hypothetical p... 32 0.32
AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical... 29 1.7
U52072-1|AAD11465.1| 97|Caenorhabditis elegans dauer-upregulat... 28 4.0
U41009-1|AAA82278.3| 501|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z81527-9|CAI91172.1| 577|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z81527-8|CAI91171.1| 537|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z81527-7|CAI91170.1| 517|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z81527-6|CAB04275.1| 739|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z68159-5|CAA92288.2| 472|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z49910-7|CAA90124.4| 384|Caenorhabditis elegans Hypothetical pr... 27 9.2
U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein. 27 9.2
AF166168-1|AAD49857.1| 679|Caenorhabditis elegans adducin-relat... 27 9.2
AF166167-1|AAD49856.1| 732|Caenorhabditis elegans adducin-relat... 27 9.2
AF045642-10|AAC02587.1| 459|Caenorhabditis elegans Hypothetical... 27 9.2
AF039043-6|AAP82653.1| 718|Caenorhabditis elegans Adducin prote... 27 9.2
AF039043-5|AAK70639.1| 732|Caenorhabditis elegans Adducin prote... 27 9.2
AF039043-4|AAL32219.1| 702|Caenorhabditis elegans Adducin prote... 27 9.2
AF039043-3|AAM54181.1| 682|Caenorhabditis elegans Adducin prote... 27 9.2
AF039043-2|AAK70638.1| 679|Caenorhabditis elegans Adducin prote... 27 9.2
>Z81039-6|CAB02772.1| 284|Caenorhabditis elegans Hypothetical
protein C25D7.8 protein.
Length = 284
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +1
Query: 256 FFRAFSYAYLERLLTDKQEYDKFYEIAKNSKDILVALGFSQFTVEDFYETFMEVIQRVGE 435
F+RA +E +L D+ +KF +++ LV LGF +T DF + F+E ++++
Sbjct: 89 FYRAILVGLIEIMLKDRARLEKFIASSRDWTRTLVELGFPDWTCTDFCDFFIEFLEKI-- 146
Query: 436 HAG-STPDLIETV 471
H+G T + + T+
Sbjct: 147 HSGVHTEEAVYTI 159
>U64845-2|AAC48031.2| 980|Caenorhabditis elegans Hypothetical
protein F45F2.10 protein.
Length = 980
Score = 32.3 bits (70), Expect = 0.25
Identities = 20/68 (29%), Positives = 36/68 (52%)
Frame = +2
Query: 2 ADDASSSSGITGNTVENSINQDELIMKQQREIEKEISETIPLVGEIEELQTLEKEYNEDP 181
A + SSS G T +N+ Q +L KQ++E+E++ E + G + +KE ++P
Sbjct: 155 AQPSCSSSKQNGKTAKNNFKQKQLTKKQRKELERKEFE---ISGAPAPIYPGQKERTKNP 211
Query: 182 IYLLKVKD 205
I + K+
Sbjct: 212 IEYVVEKE 219
>Z68161-11|CAA92300.1| 347|Caenorhabditis elegans Hypothetical
protein F20C5.6 protein.
Length = 347
Score = 31.9 bits (69), Expect = 0.32
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 26 GITGNTVENSI-NQDELIMKQQREIEKEISETIPLVGEIEELQTLEKE 166
G G+ + +I NQ+EL+ KQ EIE+ E+ L+ + EE++ + E
Sbjct: 68 GECGSELRATIKNQEELLKKQSEEIERCKEESRMLIQQKEEMENIHSE 115
>Z68159-12|CAA92289.1| 347|Caenorhabditis elegans Hypothetical
protein F20C5.6 protein.
Length = 347
Score = 31.9 bits (69), Expect = 0.32
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 26 GITGNTVENSI-NQDELIMKQQREIEKEISETIPLVGEIEELQTLEKE 166
G G+ + +I NQ+EL+ KQ EIE+ E+ L+ + EE++ + E
Sbjct: 68 GECGSELRATIKNQEELLKKQSEEIERCKEESRMLIQQKEEMENIHSE 115
>AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical
protein Y51A2D.15 protein.
Length = 1222
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +2
Query: 59 NQDELIMKQQREIEKEISETIPLVGEIEELQTLEKEYNED 178
N++ I + ++++ ++ISE L +IE L L + YNE+
Sbjct: 990 NKNNQIDELKKQLNQKISEVNKLSSKIEALSQLNRTYNEE 1029
>U52072-1|AAD11465.1| 97|Caenorhabditis elegans dauer-upregulated
protein 191 protein.
Length = 97
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = -3
Query: 408 KSFVKIFNGELRKP*GDENIF----RIFCYFVKLIIFLLISQ*AF 286
+S + N E KP G +NI+ FCYF +I+F+ S F
Sbjct: 27 QSICSVENVETEKPIGVKNIYIFCSFFFCYFCFVILFVFFSSPCF 71
>U41009-1|AAA82278.3| 501|Caenorhabditis elegans Hypothetical
protein C06E7.2 protein.
Length = 501
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 44 VENSINQDELIMKQQREIEKEISETIPLVGEIEELQTLEKEYNE 175
+ N I DE+ +++ + EKE++E I + EE EK+ E
Sbjct: 400 ISNEIPVDEISKEEEEKAEKELNEIIKELKSDEEAVDGEKDVGE 443
>Z81527-9|CAI91172.1| 577|Caenorhabditis elegans Hypothetical
protein F35E12.7d protein.
Length = 577
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 83 QQREIEKEISETIPLVGEIEELQTLEKEYNED 178
Q ++E + E VG ++ L TL+K+YN+D
Sbjct: 401 QTVKLENDGDELDVQVGSVDGLTTLDKKYNKD 432
>Z81527-8|CAI91171.1| 537|Caenorhabditis elegans Hypothetical
protein F35E12.7c protein.
Length = 537
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 83 QQREIEKEISETIPLVGEIEELQTLEKEYNED 178
Q ++E + E VG ++ L TL+K+YN+D
Sbjct: 401 QTVKLENDGDELDVQVGSVDGLTTLDKKYNKD 432
>Z81527-7|CAI91170.1| 517|Caenorhabditis elegans Hypothetical
protein F35E12.7b protein.
Length = 517
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 83 QQREIEKEISETIPLVGEIEELQTLEKEYNED 178
Q ++E + E VG ++ L TL+K+YN+D
Sbjct: 401 QTVKLENDGDELDVQVGSVDGLTTLDKKYNKD 432
>Z81527-6|CAB04275.1| 739|Caenorhabditis elegans Hypothetical
protein F35E12.7a protein.
Length = 739
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 83 QQREIEKEISETIPLVGEIEELQTLEKEYNED 178
Q ++E + E VG ++ L TL+K+YN+D
Sbjct: 401 QTVKLENDGDELDVQVGSVDGLTTLDKKYNKD 432
>Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical
protein C25G4.5 protein.
Length = 1263
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 253 FFFRAFSYAYLERLLTDKQEYDKFYEIAKNSKD 351
FF +++ LER+ K E D F + A+ +KD
Sbjct: 853 FFKKSYGKIRLERVKNQKAEQDLFIDEARGNKD 885
>Z68159-5|CAA92288.2| 472|Caenorhabditis elegans Hypothetical
protein C33D9.5 protein.
Length = 472
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 74 IMKQQREIEKEISETIPLVGEIEELQTLEKE 166
I+K++ KE+SE I + E+++ Q +EK+
Sbjct: 294 ILKEEEIKRKELSEQIKKIQELKDRQNVEKD 324
>Z49910-7|CAA90124.4| 384|Caenorhabditis elegans Hypothetical
protein F44G4.1 protein.
Length = 384
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 59 NQDELIMKQQREIEKEISETIPLVGEIEELQTLEKEYNEDPIYLLKVKD 205
++DE K+++ ++KEI + + L E+LQ L ++Y K KD
Sbjct: 45 DEDEPPKKKKKVVKKEIKQELELTD--EKLQELLEKYEASKATATKTKD 91
>U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein.
Length = 1263
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 253 FFFRAFSYAYLERLLTDKQEYDKFYEIAKNSKD 351
FF +++ LER+ K E D F + A+ +KD
Sbjct: 853 FFKKSYGKIRLERVKNQKAEQDLFIDEARGNKD 885
>AF166168-1|AAD49857.1| 679|Caenorhabditis elegans adducin-related
protein protein.
Length = 679
Score = 27.1 bits (57), Expect = 9.2
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +2
Query: 53 SINQDELIMKQQREIEKEISETIPLVGEIEELQTLEKEY-NEDPIYLLKVKDLSSKYKSI 229
++ +++L ++R+ ++I E+ E+EE+ E + DP +L ++ LS
Sbjct: 30 AVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDL---- 85
Query: 230 RRTRPDGNFSFARSHTH 280
T P GN SF HT+
Sbjct: 86 --TVPQGNMSFGNLHTY 100
>AF166167-1|AAD49856.1| 732|Caenorhabditis elegans adducin-related
protein protein.
Length = 732
Score = 27.1 bits (57), Expect = 9.2
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +2
Query: 53 SINQDELIMKQQREIEKEISETIPLVGEIEELQTLEKEY-NEDPIYLLKVKDLSSKYKSI 229
++ +++L ++R+ ++I E+ E+EE+ E + DP +L ++ LS
Sbjct: 30 AVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDL---- 85
Query: 230 RRTRPDGNFSFARSHTH 280
T P GN SF HT+
Sbjct: 86 --TVPQGNMSFGNLHTY 100
>AF045642-10|AAC02587.1| 459|Caenorhabditis elegans Hypothetical
protein C17H12.9 protein.
Length = 459
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 240 VPMAIFLSRVLIRIFGTLTD 299
+P AIF RVL R GTL+D
Sbjct: 244 IPQAIFAERVLCRSQGTLSD 263
>AF039043-6|AAP82653.1| 718|Caenorhabditis elegans Adducin protein
1, isoform e protein.
Length = 718
Score = 27.1 bits (57), Expect = 9.2
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +2
Query: 53 SINQDELIMKQQREIEKEISETIPLVGEIEELQTLEKEY-NEDPIYLLKVKDLSSKYKSI 229
++ +++L ++R+ ++I E+ E+EE+ E + DP +L ++ LS
Sbjct: 30 AVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDL---- 85
Query: 230 RRTRPDGNFSFARSHTH 280
T P GN SF HT+
Sbjct: 86 --TVPQGNMSFGNLHTY 100
>AF039043-5|AAK70639.1| 732|Caenorhabditis elegans Adducin protein
1, isoform b protein.
Length = 732
Score = 27.1 bits (57), Expect = 9.2
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +2
Query: 53 SINQDELIMKQQREIEKEISETIPLVGEIEELQTLEKEY-NEDPIYLLKVKDLSSKYKSI 229
++ +++L ++R+ ++I E+ E+EE+ E + DP +L ++ LS
Sbjct: 30 AVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDL---- 85
Query: 230 RRTRPDGNFSFARSHTH 280
T P GN SF HT+
Sbjct: 86 --TVPQGNMSFGNLHTY 100
>AF039043-4|AAL32219.1| 702|Caenorhabditis elegans Adducin protein
1, isoform c protein.
Length = 702
Score = 27.1 bits (57), Expect = 9.2
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +2
Query: 53 SINQDELIMKQQREIEKEISETIPLVGEIEELQTLEKEY-NEDPIYLLKVKDLSSKYKSI 229
++ +++L ++R+ ++I E+ E+EE+ E + DP +L ++ LS
Sbjct: 30 AVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDL---- 85
Query: 230 RRTRPDGNFSFARSHTH 280
T P GN SF HT+
Sbjct: 86 --TVPQGNMSFGNLHTY 100
>AF039043-3|AAM54181.1| 682|Caenorhabditis elegans Adducin protein
1, isoform d protein.
Length = 682
Score = 27.1 bits (57), Expect = 9.2
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +2
Query: 53 SINQDELIMKQQREIEKEISETIPLVGEIEELQTLEKEY-NEDPIYLLKVKDLSSKYKSI 229
++ +++L ++R+ ++I E+ E+EE+ E + DP +L ++ LS
Sbjct: 30 AVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDL---- 85
Query: 230 RRTRPDGNFSFARSHTH 280
T P GN SF HT+
Sbjct: 86 --TVPQGNMSFGNLHTY 100
>AF039043-2|AAK70638.1| 679|Caenorhabditis elegans Adducin protein
1, isoform a protein.
Length = 679
Score = 27.1 bits (57), Expect = 9.2
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +2
Query: 53 SINQDELIMKQQREIEKEISETIPLVGEIEELQTLEKEY-NEDPIYLLKVKDLSSKYKSI 229
++ +++L ++R+ ++I E+ E+EE+ E + DP +L ++ LS
Sbjct: 30 AVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDL---- 85
Query: 230 RRTRPDGNFSFARSHTH 280
T P GN SF HT+
Sbjct: 86 --TVPQGNMSFGNLHTY 100
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,045,188
Number of Sequences: 27780
Number of extensions: 241495
Number of successful extensions: 780
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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