Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30928X
         (482 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    39   2e-05
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    23   2.0  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    23   2.0  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    23   2.0  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   4.5  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   4.5  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   7.9  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 39.1 bits (87), Expect = 2e-05
 Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
 Frame = +2

Query: 245 LEQLEILNLANNNIQELPVSLSSLPKLRILNVSL--NKLYNLPRG-FGSFPVLEILDLTY 415
           L+ +++L+L+ NNI  +        +L ++ + L  NKL N  +  FG+ P L++LDL++
Sbjct: 222 LQNIKVLDLSFNNITSVAKQFFRPVELSLMQLYLGHNKLLNATKDLFGNMPHLQVLDLSH 281

Query: 416 NNLNE 430
           N+L E
Sbjct: 282 NSLYE 286



 Score = 36.3 bits (80), Expect = 1e-04
 Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
 Frame = +2

Query: 239 SQLEQLEILNLANNNIQELPV-SLSSLPKLRILNVSLNKLYNLP-RGFGSFPVLEILDLT 412
           + L QLE ++L +N I+ L   +  +L  L+ LN+  NK+  +    F + P LE LDL 
Sbjct: 113 ADLIQLEQIHLDDNRIESLERRAFMNLKSLKRLNLKGNKIATIAYETFQNLPELEDLDLA 172

Query: 413 YNNLN 427
           YN+++
Sbjct: 173 YNSIS 177



 Score = 34.7 bits (76), Expect = 5e-04
 Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
 Frame = +2

Query: 248 EQLEILNLANNNIQELPVSLSS-LPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNL 424
           ++L+ L+ ++N I E+P  L   L  LRI++ S N+L +LP        LE LD+++N L
Sbjct: 296 KKLQWLDTSHNRISEIPNDLFRFLGNLRIVDFSHNRLRSLPDNLFRETGLERLDVSHNLL 355

Query: 425 NE 430
            +
Sbjct: 356 GK 357



 Score = 30.3 bits (65), Expect = 0.010
 Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 14/74 (18%)
 Frame = +2

Query: 245 LEQLEILNLANNNIQELPVSL----SSLPKLRILNVSLNKLYNL----------PRGFGS 382
           L +LE L+LA N+I  L  ++     SL    + N+S NKL NL            G G 
Sbjct: 163 LPELEDLDLAYNSISSLDFNIFDQVGSLGMFHV-NMSHNKLINLVVAPSVPFEQDTGLGG 221

Query: 383 FPVLEILDLTYNNL 424
              +++LDL++NN+
Sbjct: 222 LQNIKVLDLSFNNI 235


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 128 KSISGLFISLASSITFLAFRHLACVWNTRY 39
           K +   +I L +S+TF  F +  CV N ++
Sbjct: 154 KCMKEKWIPLCNSVTFSNFGYKQCVENRKW 183


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 128 KSISGLFISLASSITFLAFRHLACVWNTRY 39
           K +   +I L +S+TF  F +  CV N ++
Sbjct: 387 KCMKEKWIPLCNSVTFSNFGYKQCVENRKW 416


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 128 KSISGLFISLASSITFLAFRHLACVWNTRY 39
           K +   +I L +S+TF  F +  CV N ++
Sbjct: 387 KCMKEKWIPLCNSVTFSNFGYKQCVENRKW 416


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +1

Query: 331 PQCFIKQTV*LAKRLWFLPC 390
           P C+I   + L    WF+ C
Sbjct: 217 PYCYINCLIYLIGGFWFMQC 236


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 18/109 (16%), Positives = 39/109 (35%), Gaps = 2/109 (1%)
 Frame = +2

Query: 35  PSILYSKHRQDVEXXXXXXXXXXXXIIRKSI*STKEYLVSKDFQAYFSGEHHSSVPKPQ- 211
           P + Y +    V             +++      K   +S D +  F G+H S    PQ 
Sbjct: 31  PPLFYEERPDFVAPYIKVEADEEAPVLKSRSFGRKRKSISSDEENSFQGKHKSRRKAPQS 90

Query: 212 -QNLCSACCTSQLEQLEILNLANNNIQELPVSLSSLPKLRILNVSLNKL 355
            +++      + + + +     N     L  S+ ++P  ++  +   KL
Sbjct: 91  FEDIQHQRVMANVRERQRTQSLNEAFASLRKSIPTMPSDKLSKIQTLKL 139


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 112 NPEIDLVDKGISSLEG 159
           +PEID+ DK    ++G
Sbjct: 65  DPEIDIEDKPAQKIDG 80


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,983
Number of Sequences: 336
Number of extensions: 2265
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11352204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)