Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30923
         (746 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   2.0  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   2.0  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   2.0  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   6.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.0  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   6.0  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   7.9  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 457 ISNSFIGGNFIRCKSNFSSAWNSL 386
           + N+F GGN +   +N+   WN L
Sbjct: 269 LGNAFQGGNQLANLANWGPEWNLL 292


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 457 ISNSFIGGNFIRCKSNFSSAWNSL 386
           + N+F GGN +   +N+   WN L
Sbjct: 270 LGNAFQGGNQLANLANWGPEWNLL 293


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 457 ISNSFIGGNFIRCKSNFSSAWNSL 386
           + N+F GGN +   +N+   WN L
Sbjct: 270 LGNAFQGGNQLANLANWGPEWNLL 293


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 12/39 (30%), Positives = 16/39 (41%)
 Frame = -2

Query: 391 SLSVCHKXXXXXXXXXXXXXTKLPNTESSTADRTSLWTN 275
           SL+ C+               KL N ESS  D+T +  N
Sbjct: 64  SLATCNMLCSEPAIWPKPVHIKLTNRESSIIDKTKISFN 102


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +1

Query: 304  WSSQC*GAWWCSTT 345
            WSS     WW +TT
Sbjct: 1043 WSSTTTSPWWTTTT 1056


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +3

Query: 690 YNPFEDGTPLHYW 728
           +NP  D  P+H W
Sbjct: 532 WNPLTDTIPIHVW 544


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 451 WICHEWEQTSTHGSSTYPQKNQIY 522
           W C+  E+T T  SST  +    Y
Sbjct: 32  WQCNTDEETCTRISSTVSRNTDTY 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,282
Number of Sequences: 336
Number of extensions: 2567
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)