Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30923
(746 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032442-1|AAH32442.1| 415|Homo sapiens NF-kappaB activating pr... 84 6e-16
BC015354-1|AAH15354.1| 415|Homo sapiens NF-kappaB activating pr... 84 6e-16
AY388958-1|AAQ90402.1| 415|Homo sapiens nuclear NF-kappaB activ... 84 6e-16
AK026279-1|BAB15428.1| 415|Homo sapiens protein ( Homo sapiens ... 84 6e-16
BC101685-1|AAI01686.1| 402|Homo sapiens chromosome 6 open readi... 81 4e-15
BC101681-1|AAI01682.1| 402|Homo sapiens chromosome 6 open readi... 81 4e-15
BC038240-1|AAH38240.1| 402|Homo sapiens chromosome 6 open readi... 81 4e-15
AL390721-1|CAC69824.1| 402|Homo sapiens protein ( Human DNA seq... 81 4e-15
>BC032442-1|AAH32442.1| 415|Homo sapiens NF-kappaB activating
protein protein.
Length = 415
Score = 83.8 bits (198), Expect = 6e-16
Identities = 46/88 (52%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = +2
Query: 257 ELSSEIIGPEA-RAIGSGALSVREXXXXXXXXXXXXXXXFVADGKRIPRRGEIGLTSDEI 433
E S++IGPEA + + S +V GKRIPRRGEIGLTS+EI
Sbjct: 285 EEPSDLIGPEAPKTLTSQDDKPLNYGHALLPGEGAAMAEYVKAGKRIPRRGEIGLTSEEI 344
Query: 434 ASYEAVGYVMSGSRHRRMEAVRIRKRTR 517
AS+E GYVMSGSRHRRMEAVR+RK +
Sbjct: 345 ASFECSGYVMSGSRHRRMEAVRLRKENQ 372
Score = 34.7 bits (76), Expect = 0.36
Identities = 14/29 (48%), Positives = 23/29 (79%)
Frame = +3
Query: 543 LAAFSKDERNKRENAILSQFRDVLKARQK 629
LA+F+++ER KREN IL+ FR+++ + K
Sbjct: 382 LASFNQEERRKRENKILASFREMVYRKTK 410
>BC015354-1|AAH15354.1| 415|Homo sapiens NF-kappaB activating
protein protein.
Length = 415
Score = 83.8 bits (198), Expect = 6e-16
Identities = 46/88 (52%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = +2
Query: 257 ELSSEIIGPEA-RAIGSGALSVREXXXXXXXXXXXXXXXFVADGKRIPRRGEIGLTSDEI 433
E S++IGPEA + + S +V GKRIPRRGEIGLTS+EI
Sbjct: 285 EEPSDLIGPEAPKTLTSQDDKPLNYGHALLPGEGAAMAEYVKAGKRIPRRGEIGLTSEEI 344
Query: 434 ASYEAVGYVMSGSRHRRMEAVRIRKRTR 517
AS+E GYVMSGSRHRRMEAVR+RK +
Sbjct: 345 ASFECSGYVMSGSRHRRMEAVRLRKENQ 372
Score = 34.7 bits (76), Expect = 0.36
Identities = 14/29 (48%), Positives = 23/29 (79%)
Frame = +3
Query: 543 LAAFSKDERNKRENAILSQFRDVLKARQK 629
LA+F+++ER KREN IL+ FR+++ + K
Sbjct: 382 LASFNQEERRKRENKILASFREMVYRKTK 410
>AY388958-1|AAQ90402.1| 415|Homo sapiens nuclear NF-kappaB
activating protein protein.
Length = 415
Score = 83.8 bits (198), Expect = 6e-16
Identities = 46/88 (52%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = +2
Query: 257 ELSSEIIGPEA-RAIGSGALSVREXXXXXXXXXXXXXXXFVADGKRIPRRGEIGLTSDEI 433
E S++IGPEA + + S +V GKRIPRRGEIGLTS+EI
Sbjct: 285 EEPSDLIGPEAPKTLTSQDDKPLNYGHALLPGEGAAMAEYVKAGKRIPRRGEIGLTSEEI 344
Query: 434 ASYEAVGYVMSGSRHRRMEAVRIRKRTR 517
AS+E GYVMSGSRHRRMEAVR+RK +
Sbjct: 345 ASFECSGYVMSGSRHRRMEAVRLRKENQ 372
Score = 34.7 bits (76), Expect = 0.36
Identities = 14/29 (48%), Positives = 23/29 (79%)
Frame = +3
Query: 543 LAAFSKDERNKRENAILSQFRDVLKARQK 629
LA+F+++ER KREN IL+ FR+++ + K
Sbjct: 382 LASFNQEERRKRENKILASFREMVYRKTK 410
>AK026279-1|BAB15428.1| 415|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22626 fis, clone HSI06109. ).
Length = 415
Score = 83.8 bits (198), Expect = 6e-16
Identities = 46/88 (52%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = +2
Query: 257 ELSSEIIGPEA-RAIGSGALSVREXXXXXXXXXXXXXXXFVADGKRIPRRGEIGLTSDEI 433
E S++IGPEA + + S +V GKRIPRRGEIGLTS+EI
Sbjct: 285 EEPSDLIGPEAPKTLTSQDDKPLNYGHALLPGEGAAMAEYVKAGKRIPRRGEIGLTSEEI 344
Query: 434 ASYEAVGYVMSGSRHRRMEAVRIRKRTR 517
AS+E GYVMSGSRHRRMEAVR+RK +
Sbjct: 345 ASFECSGYVMSGSRHRRMEAVRLRKENQ 372
Score = 34.7 bits (76), Expect = 0.36
Identities = 14/29 (48%), Positives = 23/29 (79%)
Frame = +3
Query: 543 LAAFSKDERNKRENAILSQFRDVLKARQK 629
LA+F+++ER KREN IL+ FR+++ + K
Sbjct: 382 LASFNQEERRKRENKILASFREMVYRKTK 410
>BC101685-1|AAI01686.1| 402|Homo sapiens chromosome 6 open reading
frame 194 protein.
Length = 402
Score = 81.0 bits (191), Expect = 4e-15
Identities = 37/49 (75%), Positives = 42/49 (85%)
Frame = +2
Query: 371 FVADGKRIPRRGEIGLTSDEIASYEAVGYVMSGSRHRRMEAVRIRKRTR 517
+V GKRIPRRGEIGLTS+EI S+E GYVMSGSRHRRMEAVR+RK +
Sbjct: 311 YVKAGKRIPRRGEIGLTSEEIGSFECSGYVMSGSRHRRMEAVRLRKENQ 359
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/29 (44%), Positives = 23/29 (79%)
Frame = +3
Query: 543 LAAFSKDERNKRENAILSQFRDVLKARQK 629
LA+F+++ER KRE+ IL+ FR+++ + K
Sbjct: 369 LASFNQEERRKRESKILASFREMVHKKTK 397
>BC101681-1|AAI01682.1| 402|Homo sapiens chromosome 6 open reading
frame 194 protein.
Length = 402
Score = 81.0 bits (191), Expect = 4e-15
Identities = 37/49 (75%), Positives = 42/49 (85%)
Frame = +2
Query: 371 FVADGKRIPRRGEIGLTSDEIASYEAVGYVMSGSRHRRMEAVRIRKRTR 517
+V GKRIPRRGEIGLTS+EI S+E GYVMSGSRHRRMEAVR+RK +
Sbjct: 311 YVKAGKRIPRRGEIGLTSEEIGSFECSGYVMSGSRHRRMEAVRLRKENQ 359
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/29 (44%), Positives = 23/29 (79%)
Frame = +3
Query: 543 LAAFSKDERNKRENAILSQFRDVLKARQK 629
LA+F+++ER KRE+ IL+ FR+++ + K
Sbjct: 369 LASFNQEERRKRESKILASFREMVHKKTK 397
>BC038240-1|AAH38240.1| 402|Homo sapiens chromosome 6 open reading
frame 194 protein.
Length = 402
Score = 81.0 bits (191), Expect = 4e-15
Identities = 37/49 (75%), Positives = 42/49 (85%)
Frame = +2
Query: 371 FVADGKRIPRRGEIGLTSDEIASYEAVGYVMSGSRHRRMEAVRIRKRTR 517
+V GKRIPRRGEIGLTS+EI S+E GYVMSGSRHRRMEAVR+RK +
Sbjct: 311 YVKAGKRIPRRGEIGLTSEEIGSFECSGYVMSGSRHRRMEAVRLRKENQ 359
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/29 (44%), Positives = 23/29 (79%)
Frame = +3
Query: 543 LAAFSKDERNKRENAILSQFRDVLKARQK 629
LA+F+++ER KRE+ IL+ FR+++ + K
Sbjct: 369 LASFNQEERRKRESKILASFREMVHKKTK 397
>AL390721-1|CAC69824.1| 402|Homo sapiens protein ( Human DNA
sequence from clone RP11-424I5 on chromosome 6 Contains
a novel gene, ESTs, STSs, GSSs and a CpG island. ).
Length = 402
Score = 81.0 bits (191), Expect = 4e-15
Identities = 37/49 (75%), Positives = 42/49 (85%)
Frame = +2
Query: 371 FVADGKRIPRRGEIGLTSDEIASYEAVGYVMSGSRHRRMEAVRIRKRTR 517
+V GKRIPRRGEIGLTS+EI S+E GYVMSGSRHRRMEAVR+RK +
Sbjct: 311 YVKAGKRIPRRGEIGLTSEEIGSFECSGYVMSGSRHRRMEAVRLRKENQ 359
Score = 33.5 bits (73), Expect = 0.82
Identities = 13/31 (41%), Positives = 24/31 (77%)
Frame = +3
Query: 543 LAAFSKDERNKRENAILSQFRDVLKARQKRE 635
LA+F+++ER KRE+ IL+ FR+++ + K +
Sbjct: 369 LASFNQEERRKRESKILASFREMVHKKTKEK 399
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,725,234
Number of Sequences: 237096
Number of extensions: 1526312
Number of successful extensions: 3147
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3147
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -