Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30920X
         (412 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L07868-1|AAB59446.1| 1308|Homo sapiens receptor tyrosine kinase ...    30   2.6  
BC112199-1|AAI12200.1| 1308|Homo sapiens v-erb-a erythroblastic ...    30   2.6  
AC105921-1|AAY24303.1|  552|Homo sapiens unknown protein.              30   2.6  
AB209697-1|BAD92934.1|  892|Homo sapiens v-erb-a erythroblastic ...    30   2.6  
BC029264-1|AAH29264.1|  305|Homo sapiens ring finger protein 148...    29   6.0  
AK128666-1|BAC87560.1|  167|Homo sapiens protein ( Homo sapiens ...    29   6.0  
AK098654-1|BAC05367.1|  305|Homo sapiens protein ( Homo sapiens ...    29   6.0  

>L07868-1|AAB59446.1| 1308|Homo sapiens receptor tyrosine kinase
           protein.
          Length = 1308

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
 Frame = +1

Query: 115 FRHTSNALVIFSRIRH*I----NR----IKYEG-VCSHRCLSGSGCAGRGRLMLSDVDQG 267
           + HT N   +FS I   I    NR       EG VC+H C S  GC G G        + 
Sbjct: 468 YYHTINWTTLFSTINQRIVIRDNRKAENCTAEGMVCNHLC-SSDGCWGPGPDQCLSCRRF 526

Query: 268 CRRTLSLPHCSAYYGQFKD 324
            R  + +  C+ Y G+F++
Sbjct: 527 SRGRICIESCNLYDGEFRE 545


>BC112199-1|AAI12200.1| 1308|Homo sapiens v-erb-a erythroblastic
           leukemia viral oncogene homolog 4 (avian) protein.
          Length = 1308

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
 Frame = +1

Query: 115 FRHTSNALVIFSRIRH*I----NR----IKYEG-VCSHRCLSGSGCAGRGRLMLSDVDQG 267
           + HT N   +FS I   I    NR       EG VC+H C S  GC G G        + 
Sbjct: 468 YYHTINWTTLFSTINQRIVIRDNRKAENCTAEGMVCNHLC-SSDGCWGPGPDQCLSCRRF 526

Query: 268 CRRTLSLPHCSAYYGQFKD 324
            R  + +  C+ Y G+F++
Sbjct: 527 SRGRICIESCNLYDGEFRE 545


>AC105921-1|AAY24303.1|  552|Homo sapiens unknown protein.
          Length = 552

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
 Frame = +1

Query: 115 FRHTSNALVIFSRIRH*I----NR----IKYEG-VCSHRCLSGSGCAGRGRLMLSDVDQG 267
           + HT N   +FS I   I    NR       EG VC+H C S  GC G G        + 
Sbjct: 327 YYHTINWTTLFSTINQRIVIRDNRKAENCTAEGMVCNHLC-SSDGCWGPGPDQCLSCRRF 385

Query: 268 CRRTLSLPHCSAYYGQFKD 324
            R  + +  C+ Y G+F++
Sbjct: 386 SRGRICIESCNLYDGEFRE 404


>AB209697-1|BAD92934.1|  892|Homo sapiens v-erb-a erythroblastic
           leukemia viral oncogene homolog 4 variant protein.
          Length = 892

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
 Frame = +1

Query: 115 FRHTSNALVIFSRIRH*I----NR----IKYEG-VCSHRCLSGSGCAGRGRLMLSDVDQG 267
           + HT N   +FS I   I    NR       EG VC+H C S  GC G G        + 
Sbjct: 68  YYHTINWTTLFSTINQRIVIRDNRKAENCTAEGMVCNHLC-SSDGCWGPGPDQCLSCRRF 126

Query: 268 CRRTLSLPHCSAYYGQFKD 324
            R  + +  C+ Y G+F++
Sbjct: 127 SRGRICIESCNLYDGEFRE 145


>BC029264-1|AAH29264.1|  305|Homo sapiens ring finger protein 148
           protein.
          Length = 305

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +3

Query: 216 LWVCWPRKTHAI-RRRPRMQTDFKSAALQRVLRPIQGQPRCSERTEGISLTVFETFLPLS 392
           +W   PR  ++  RRR +++TD K A  Q  LR ++      +  E   +  F+T+ P  
Sbjct: 210 VWRLTPRVPNSFTRRRSQIKTDVKKAIDQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQD 269

Query: 393 PVGLL 407
            V +L
Sbjct: 270 VVRIL 274


>AK128666-1|BAC87560.1|  167|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46826 fis, clone UTERU2014998. ).
          Length = 167

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = +3

Query: 159 PLNKSHQI*RCMLSSLPVWLWVCWPRKTHAIRRRPRMQTDFKSAALQRVLRPIQ 320
           P+    Q   C  +S P+W+W+C P  + +   RPR+     SA+  +V+ P Q
Sbjct: 35  PMTIRKQNGSCPSTSCPLWVWLCHP--SWSAVARPRLAA--ASASWAQVILPPQ 84


>AK098654-1|BAC05367.1|  305|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25788 fis, clone TST06884. ).
          Length = 305

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +3

Query: 216 LWVCWPRKTHAI-RRRPRMQTDFKSAALQRVLRPIQGQPRCSERTEGISLTVFETFLPLS 392
           +W   PR  ++  RRR +++TD K A  Q  LR ++      +  E   +  F+T+ P  
Sbjct: 210 VWRLTPRVPNSFTRRRSQIKTDVKKAIDQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQD 269

Query: 393 PVGLL 407
            V +L
Sbjct: 270 VVRIL 274


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,879,121
Number of Sequences: 237096
Number of extensions: 1255740
Number of successful extensions: 2447
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2447
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3030544982
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)