Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30920X
         (412 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92803-13|CAB07249.2|  331|Caenorhabditis elegans Hypothetical p...    30   0.57 
AL021482-4|CAA16341.2|  331|Caenorhabditis elegans Hypothetical ...    30   0.57 
Z70780-10|CAA94827.1|  330|Caenorhabditis elegans Hypothetical p...    27   5.3  
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ...    26   9.2  

>Z92803-13|CAB07249.2|  331|Caenorhabditis elegans Hypothetical
           protein K01G5.9 protein.
          Length = 331

 Score = 30.3 bits (65), Expect = 0.57
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +1

Query: 175 IKYEGVCSHRCLSGSGCAGRGRLMLSDVDQGCRRTLSLPHCSAYYGQ 315
           +K+ G   H C+ GSG     R      DQ   RT+S+  CS  +G+
Sbjct: 182 LKHSGRLGHSCVYGSGTWSERRQYEEPFDQVSERTISI--CSTGHGE 226


>AL021482-4|CAA16341.2|  331|Caenorhabditis elegans Hypothetical
           protein K01G5.9 protein.
          Length = 331

 Score = 30.3 bits (65), Expect = 0.57
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +1

Query: 175 IKYEGVCSHRCLSGSGCAGRGRLMLSDVDQGCRRTLSLPHCSAYYGQ 315
           +K+ G   H C+ GSG     R      DQ   RT+S+  CS  +G+
Sbjct: 182 LKHSGRLGHSCVYGSGTWSERRQYEEPFDQVSERTISI--CSTGHGE 226


>Z70780-10|CAA94827.1|  330|Caenorhabditis elegans Hypothetical
           protein F46B6.11 protein.
          Length = 330

 Score = 27.1 bits (57), Expect = 5.3
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 173 ASNMKVYALIVACLALGVLAEEDSCY 250
           +SN+  Y  ++ C+AL V A   SCY
Sbjct: 275 SSNLYAYMFLLRCIALDVRAHIVSCY 300


>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
            protein F39C12.1 protein.
          Length = 5105

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 266  PWSTSDSMSLPRPAHPEPDR 207
            P   S   SLPRPA P P++
Sbjct: 3386 PLQLSGDSSLPRPAQPSPEK 3405


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,387,555
Number of Sequences: 27780
Number of extensions: 192366
Number of successful extensions: 441
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 441
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)