Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30917
         (724 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    25   1.8  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   3.1  
AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.            23   7.2  

>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 599 NGCVELRGARMRSGFGAIRIEKEF 670
           NGC   RG +  + F  + +EKEF
Sbjct: 134 NGCPRRRGRQTYTRFQTLELEKEF 157


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -1

Query: 235 RRDFLLNYFVVFVSMNSNQESLHSCVFRPATAVSR 131
           RRD  ++Y  +F+ +     +L+SCV    T  +R
Sbjct: 877 RRDHNIDYSSLFIQLTGTFPTLYSCVSCHKTVSNR 911


>AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.
          Length = 438

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 87  IENVETTDSHRGLNLRDTAVAGR 155
           I N  T  SHR ++L+D    GR
Sbjct: 108 ISNSSTNISHRPIDLKDIKARGR 130


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,161
Number of Sequences: 2352
Number of extensions: 11262
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)