Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30913X
         (546 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121690-1|AAM52017.1|  724|Drosophila melanogaster RE53177p pro...    29   5.4  
AE014298-2880|AAF48977.2|  713|Drosophila melanogaster CG14205-P...    29   5.4  
AE014297-996|AAF54422.3| 4671|Drosophila melanogaster CG9492-PA ...    28   7.2  

>AY121690-1|AAM52017.1|  724|Drosophila melanogaster RE53177p
           protein.
          Length = 724

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +2

Query: 38  AIVILCLFVASLYAADSDVPNDILEEQLY 124
           A++  CLF    YAAD+++P  I+EE  Y
Sbjct: 553 ALLFSCLFAVYGYAADAEIP-PIVEEAFY 580


>AE014298-2880|AAF48977.2|  713|Drosophila melanogaster CG14205-PA
           protein.
          Length = 713

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +2

Query: 38  AIVILCLFVASLYAADSDVPNDILEEQLY 124
           A++  CLF    YAAD+++P  I+EE  Y
Sbjct: 542 ALLFSCLFAVYGYAADAEIP-PIVEEAFY 569


>AE014297-996|AAF54422.3| 4671|Drosophila melanogaster CG9492-PA
            protein.
          Length = 4671

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
 Frame = -3

Query: 421  RSAIVALNIIAQHQS---ETVELENKINRVIGEDKSEINWEKIAGRCPWSPGAKVDRRT 254
            RS +V + +   H+    ++V L+N+I R   ED +E   E +     +  GA +DRR+
Sbjct: 4537 RSFVVRIEVTRAHKGWALDSVVLQNQITRYNKEDITEYPTEGVYVHGLFLEGASLDRRS 4595


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,952,324
Number of Sequences: 53049
Number of extensions: 399938
Number of successful extensions: 1455
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1455
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2069139900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)