Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30909
         (667 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3E346 Cluster: Putative uncharacterized protein; n=1; ...    34   2.7  
UniRef50_UPI000050FE0E Cluster: COG0306: Phosphate/sulphate perm...    33   6.2  
UniRef50_A6LI51 Cluster: Putative uncharacterized protein; n=1; ...    33   6.2  
UniRef50_Q7S880 Cluster: Predicted protein; n=1; Neurospora cras...    33   6.2  
UniRef50_O94527 Cluster: WD repeat protein, human IQWD1 family; ...    33   6.2  
UniRef50_Q68CZ2 Cluster: Tensin-3; n=33; Euteleostomi|Rep: Tensi...    33   6.2  
UniRef50_A2XAV4 Cluster: Putative uncharacterized protein; n=2; ...    33   8.2  

>UniRef50_Q3E346 Cluster: Putative uncharacterized protein; n=1;
           Chloroflexus aurantiacus J-10-fl|Rep: Putative
           uncharacterized protein - Chloroflexus aurantiacus
           J-10-fl
          Length = 670

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = -1

Query: 259 RLGIPSVVHAAYQIPPPSNLDAQGMTLPYSILPTN*ALVPVYTRPDRFRRADV 101
           R+  P +VH+AYQ    + L     TLP+++ PT+  LV +   P  F   DV
Sbjct: 613 RINQPMIVHSAYQDADYTQLPETAQTLPFTVDPTHFRLVEIPPLP--FDEVDV 663


>UniRef50_UPI000050FE0E Cluster: COG0306: Phosphate/sulphate
           permeases; n=1; Brevibacterium linens BL2|Rep: COG0306:
           Phosphate/sulphate permeases - Brevibacterium linens BL2
          Length = 500

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = +3

Query: 120 RSGLV*TGTSAQFVGRIEYGSVMP*ASRLLGGGIWYAACTTLGIPKRTTH 269
           +SG+V  G +A  +  +E+  +M   + LLGG +W    T +G P  TTH
Sbjct: 117 KSGIVDLGAAA--LDPMEFAYIM--MAALLGGAVWLLIATRMGWPVSTTH 162


>UniRef50_A6LI51 Cluster: Putative uncharacterized protein; n=1;
           Parabacteroides distasonis ATCC 8503|Rep: Putative
           uncharacterized protein - Parabacteroides distasonis
           (strain ATCC 8503 / DSM 20701 / NCTC11152)
          Length = 503

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = -1

Query: 268 WVVRLGIPSVVHAAYQIPPPSNLDAQGMTLPYSILPTN 155
           W V  G   V       PPP   D QG+T+PY+I P N
Sbjct: 33  WAVHPGGFVVAENERMSPPPMFPDYQGVTIPYNIAPLN 70


>UniRef50_Q7S880 Cluster: Predicted protein; n=1; Neurospora
           crassa|Rep: Predicted protein - Neurospora crassa
          Length = 667

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -1

Query: 418 YDCQFEGGRLHDVIDALCDQVLPD 347
           +DC+  GGRL DV+D +C Q + D
Sbjct: 316 WDCRIVGGRLSDVVDPVCGQCMYD 339


>UniRef50_O94527 Cluster: WD repeat protein, human IQWD1 family;
           n=1; Schizosaccharomyces pombe|Rep: WD repeat protein,
           human IQWD1 family - Schizosaccharomyces pombe (Fission
           yeast)
          Length = 809

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -1

Query: 295 W*SFYDFLPWVVRLGIPSVVHAAYQIPPPSNLDAQGMTL 179
           W   YDF+ WV R  +    H A Q+ PP+N+  Q   L
Sbjct: 457 WGWLYDFMNWVTRYLLGISDHWALQMSPPTNVARQNFVL 495


>UniRef50_Q68CZ2 Cluster: Tensin-3; n=33; Euteleostomi|Rep: Tensin-3
           - Homo sapiens (Human)
          Length = 1445

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = +1

Query: 106 RRGGSGQVSYKLEQALNLWGESSMGVSCPERQGCSAEVSGTRH-VPHLEYLSGRPMEENR 282
           RRG S Q   +L+Q L+ +G    G S  E     ++ SGTRH VP   +++G    ++R
Sbjct: 414 RRGLSAQEKAELDQLLSGFGLEDPGSSLKEMTDARSKYSGTRHVVPAQVHVNGDAALKDR 473

Query: 283 RS 288
            +
Sbjct: 474 ET 475


>UniRef50_A2XAV4 Cluster: Putative uncharacterized protein; n=2;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 384

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = -3

Query: 272 SMGRPLRYSKCGTCRVPDTSAEQP*RSGHDTPILDSPHKLSACSSL--YET*PLPPRRRH 99
           +M R     K G C    +S+  P  +GH +P    P  L+ACSS   Y + P PP   H
Sbjct: 200 AMARSAAAIKAGGCYSNSSSSHDPAAAGHHSP-PPFPASLAACSSSHHYSSHPPPPPDHH 258


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 645,105,371
Number of Sequences: 1657284
Number of extensions: 13350849
Number of successful extensions: 35201
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 33898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35192
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)