Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30906
(820 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73973-4|CAE54908.1| 367|Caenorhabditis elegans Hypothetical pr... 100 1e-21
Z73973-3|CAA98265.1| 468|Caenorhabditis elegans Hypothetical pr... 100 1e-21
Z46343-1|CAA86456.2| 356|Caenorhabditis elegans Hypothetical pr... 49 3e-06
U00051-14|AAM29692.1| 469|Caenorhabditis elegans Hypothetical p... 46 2e-05
U00051-13|AAA91358.1| 491|Caenorhabditis elegans Hypothetical p... 46 2e-05
AC006834-5|AAF40007.1| 451|Caenorhabditis elegans Hypothetical ... 37 0.020
U29515-1|AAC06328.1| 449|Caenorhabditis elegans fem-2 protein. 35 0.080
U28412-8|AAC46598.1| 449|Caenorhabditis elegans Feminization of... 35 0.080
CU457741-2|CAM36343.1| 574|Caenorhabditis elegans Hypothetical ... 31 0.75
AC026301-13|AAP13737.1| 766|Caenorhabditis elegans Hypothetical... 31 1.3
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 28 9.2
Z81048-2|CAB02840.1| 553|Caenorhabditis elegans Hypothetical pr... 28 9.2
>Z73973-4|CAE54908.1| 367|Caenorhabditis elegans Hypothetical
protein F25D1.1b protein.
Length = 367
Score = 100 bits (240), Expect = 1e-21
Identities = 42/94 (44%), Positives = 65/94 (69%)
Frame = +3
Query: 3 EPEVFLHERSEAEDEFMVLACDGVWDVMSNDALCAYVHSLLQLTDDLVAITNQVIDTCLY 182
EP+V++ ER+ D+FMV+ACDG++DVM+N+ L +V L + DL + + V+D CL
Sbjct: 207 EPDVYIRERNLENDQFMVVACDGIYDVMTNEELAEFVKDRLSVHSDLREVCDDVLDECLV 266
Query: 183 KGSKDNMSIVLVVFPAAPKPNPEARRLTRSWMKR 284
KGS+DNM++V+V FPAAP+ N + +W+ R
Sbjct: 267 KGSRDNMTMVVVCFPAAPEVNIHRKEAEEAWVSR 300
>Z73973-3|CAA98265.1| 468|Caenorhabditis elegans Hypothetical
protein F25D1.1a protein.
Length = 468
Score = 100 bits (240), Expect = 1e-21
Identities = 42/94 (44%), Positives = 65/94 (69%)
Frame = +3
Query: 3 EPEVFLHERSEAEDEFMVLACDGVWDVMSNDALCAYVHSLLQLTDDLVAITNQVIDTCLY 182
EP+V++ ER+ D+FMV+ACDG++DVM+N+ L +V L + DL + + V+D CL
Sbjct: 308 EPDVYIRERNLENDQFMVVACDGIYDVMTNEELAEFVKDRLSVHSDLREVCDDVLDECLV 367
Query: 183 KGSKDNMSIVLVVFPAAPKPNPEARRLTRSWMKR 284
KGS+DNM++V+V FPAAP+ N + +W+ R
Sbjct: 368 KGSRDNMTMVVVCFPAAPEVNIHRKEAEEAWVSR 401
>Z46343-1|CAA86456.2| 356|Caenorhabditis elegans Hypothetical
protein T23F11.1 protein.
Length = 356
Score = 49.2 bits (112), Expect = 3e-06
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Frame = +3
Query: 6 PEVFLHERSEAEDEFMVLACDGVWDVMSNDALCAYVHSLLQLTDDLVAITNQVIDTCLYK 185
P+V + ++ + EF+VLACDG+WDVM+N + +V L D +I +++ CL
Sbjct: 209 PDV-ITDKLTPDHEFIVLACDGIWDVMTNQEVVDFVREKLAEKRDPQSICEELLTRCLAP 267
Query: 186 GSK------DNMSIVLV 218
+ DNM++VLV
Sbjct: 268 DCQMGGLGCDNMTVVLV 284
>U00051-14|AAM29692.1| 469|Caenorhabditis elegans Hypothetical
protein F42G9.1b protein.
Length = 469
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Frame = +3
Query: 6 PEVFLHERSEAEDEFMVLACDGVWDVMSNDALCAYVHSLLQLTDDLVAITNQVIDTCLYK 185
P+V + E EDEF+V+ACDG+W+ M + + +V LL + + + D CL
Sbjct: 387 PDVKI-EALTPEDEFIVVACDGIWNSMESQQVVDFVRDLLAKGSSCAEVCDALCDACLAD 445
Query: 186 GSK------DNMSIVLVVFPAAPK 239
+ DNM+++ F K
Sbjct: 446 STDGDGTGCDNMTVICTTFDRKSK 469
>U00051-13|AAA91358.1| 491|Caenorhabditis elegans Hypothetical
protein F42G9.1a protein.
Length = 491
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Frame = +3
Query: 6 PEVFLHERSEAEDEFMVLACDGVWDVMSNDALCAYVHSLLQLTDDLVAITNQVIDTCLYK 185
P+V + E EDEF+V+ACDG+W+ M + + +V LL + + + D CL
Sbjct: 409 PDVKI-EALTPEDEFIVVACDGIWNSMESQQVVDFVRDLLAKGSSCAEVCDALCDACLAD 467
Query: 186 GSK------DNMSIVLVVFPAAPK 239
+ DNM+++ F K
Sbjct: 468 STDGDGTGCDNMTVICTTFDRKSK 491
>AC006834-5|AAF40007.1| 451|Caenorhabditis elegans Hypothetical
protein ZK973.3 protein.
Length = 451
Score = 36.7 bits (81), Expect = 0.020
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 6 PEVFLHERSEAEDEFMVLACDGVWDVMSNDALCAYVH 116
PEVF H+ + D F+VLA DG+W+ + D + VH
Sbjct: 310 PEVFYHKLTP-NDRFLVLATDGLWEWLDPDTVVRLVH 345
>U29515-1|AAC06328.1| 449|Caenorhabditis elegans fem-2 protein.
Length = 449
Score = 34.7 bits (76), Expect = 0.080
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +3
Query: 33 EAEDEFMVLACDGVWDVMSNDALCAYVHSLLQ--LTDDLVAITNQVIDTCLYKGSKDNMS 206
E+ D ++LACDG+ DV + L V + +D ++ + + GS DN+S
Sbjct: 359 ESSDYLVLLACDGISDVFNERDLYQLVEAFANDYPVEDYAELSRFICTKAIEAGSADNVS 418
Query: 207 IVL 215
+V+
Sbjct: 419 VVI 421
>U28412-8|AAC46598.1| 449|Caenorhabditis elegans Feminization of xx
and xo animalsprotein 2 protein.
Length = 449
Score = 34.7 bits (76), Expect = 0.080
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +3
Query: 33 EAEDEFMVLACDGVWDVMSNDALCAYVHSLLQ--LTDDLVAITNQVIDTCLYKGSKDNMS 206
E+ D ++LACDG+ DV + L V + +D ++ + + GS DN+S
Sbjct: 359 ESSDYLVLLACDGISDVFNERDLYQLVEAFANDYPVEDYAELSRFICTKAIEAGSADNVS 418
Query: 207 IVL 215
+V+
Sbjct: 419 VVI 421
>CU457741-2|CAM36343.1| 574|Caenorhabditis elegans Hypothetical
protein C42C1.2 protein.
Length = 574
Score = 31.5 bits (68), Expect = 0.75
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 39 EDEFMVLACDGVWDVMSNDALCAYVHSLLQLTD 137
+ + +++A DG+WDV+SN+ V S L TD
Sbjct: 470 DKDVVIVASDGLWDVLSNEDAGLIVRSTLGSTD 502
>AC026301-13|AAP13737.1| 766|Caenorhabditis elegans Hypothetical
protein Y54F10BM.1 protein.
Length = 766
Score = 30.7 bits (66), Expect = 1.3
Identities = 28/108 (25%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Frame = +3
Query: 3 EPEVFLHERSEAEDEFMVLACDGVWDVMSNDALCAYV---HSLLQLTDDLVAITNQ-VID 170
EP++ +H R D +VLA DG+ +VM+ D + V ++++ +++ ++ V+
Sbjct: 254 EPDLGVH-RLTGNDFCLVLASDGMTNVMTGDQAISIVFKEEEMVEIHEEINRNHSRCVLR 312
Query: 171 TCLYKGSK---DNMSIVLVVFPAAPKPNPEARRLTRSWMKRYDKESQL 305
+ L K DN++I V+F P +A L + + +Y SQ+
Sbjct: 313 SALQKWRSLRADNVTIATVIFDIEPIKYTDAEMLMK--VGKYVNASQV 358
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 27.9 bits (59), Expect = 9.2
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 19 CMRDQKQKMNSWYWRVMEFGM 81
C +Q + WYW ++EFG+
Sbjct: 231 CKEEQPEGEAEWYWSLLEFGI 251
>Z81048-2|CAB02840.1| 553|Caenorhabditis elegans Hypothetical
protein C41G7.3 protein.
Length = 553
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 148 LSPIKSLIPAFIREAKTT*VSYWWCSRRHPNRTPR 252
L P + + AF AK V+ WW + + PN P+
Sbjct: 399 LIPAGAAVAAFASFAKDQQVADWWAALKKPNWAPK 433
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,815,478
Number of Sequences: 27780
Number of extensions: 379811
Number of successful extensions: 1033
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1033
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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