Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30902
(672 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 138 9e-34
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 136 3e-33
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 115 7e-27
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 96 4e-21
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 89 4e-19
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 31 0.11
SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog Rhp16|Schizo... 29 0.46
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.61
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 29 0.81
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 28 1.4
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 27 1.9
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 27 1.9
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 3.3
SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces pom... 27 3.3
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 26 5.7
SPAC1556.07 |pmm1||phosphomannomutase Pmm1|Schizosaccharomyces p... 25 7.5
SPAC4H3.10c |pyk1||pyruvate kinase |Schizosaccharomyces pombe|ch... 25 7.5
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 25 7.5
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 7.5
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 25 7.5
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 25 9.9
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 25 9.9
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 25 9.9
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 138 bits (333), Expect = 9e-34
Identities = 65/83 (78%), Positives = 73/83 (87%)
Frame = +2
Query: 2 LTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVN 181
L+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T K KITITNDKGRLSKEEI+RMV+
Sbjct: 459 LSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVS 518
Query: 182 EAEKYRNEDDKQKETIQAKNALE 250
EAEKY+ ED+ + IQAKN LE
Sbjct: 519 EAEKYKAEDEAETSRIQAKNHLE 541
Score = 80.2 bits (189), Expect = 2e-16
Identities = 33/68 (48%), Positives = 50/68 (73%)
Frame = +1
Query: 253 FCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYN 432
+ +S++++++D LK+K+ SDK+ I +TI+WLD N A K+EYE KQKELEG+ N
Sbjct: 543 YAYSLRNSLDDPNLKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQKELEGVAN 602
Query: 433 PIITKMYQ 456
PI+ K+YQ
Sbjct: 603 PIMAKIYQ 610
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 136 bits (329), Expect = 3e-33
Identities = 65/83 (78%), Positives = 72/83 (86%)
Frame = +2
Query: 2 LTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVN 181
L+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T K KITITNDKGRLSKEEI+RMV
Sbjct: 459 LSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVA 518
Query: 182 EAEKYRNEDDKQKETIQAKNALE 250
EAEKY+ ED+ + IQAKN LE
Sbjct: 519 EAEKYKAEDEAESGRIQAKNHLE 541
Score = 79.4 bits (187), Expect = 4e-16
Identities = 32/68 (47%), Positives = 51/68 (75%)
Frame = +1
Query: 253 FCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYN 432
+ +S++++++D LK+K+ SDK+T+ +TI+WLDSN A K+E+E KQKELE + N
Sbjct: 543 YAYSLRNSLDDPNLKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESVAN 602
Query: 433 PIITKMYQ 456
PI+ K+YQ
Sbjct: 603 PIMAKIYQ 610
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 115 bits (276), Expect = 7e-27
Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Frame = +2
Query: 2 LTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS-TNKENKITITNDKGRLSKEEIERMV 178
L GIPPAPRGVPQIEVTF++DANG+L VSA++KS K K+ I NDKGRLS+E+IERMV
Sbjct: 488 LRGIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKLVIKNDKGRLSEEDIERMV 547
Query: 179 NEAEKYRNEDDKQKETIQAKNALE 250
EAE++ ED KE I+A+N LE
Sbjct: 548 KEAEEFAEEDKILKERIEARNTLE 571
Score = 54.0 bits (124), Expect = 2e-08
Identities = 24/69 (34%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Frame = +1
Query: 253 FCFSMKSTMED-EKLKEKISDSDKQTILDKCNDTIKWLD-SNQLADKEEYEHKQKELEGI 426
+ +S+K +D E+L K+ DKQ +LD D +WL+ + A KEE+E ++++L+ +
Sbjct: 573 YAYSLKGQFDDDEQLGGKVDPEDKQAVLDAVEDVAEWLEIHGEDASKEEFEDQRQKLDAV 632
Query: 427 YNPIITKMY 453
+PI K+Y
Sbjct: 633 VHPITQKLY 641
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 96.3 bits (229), Expect = 4e-21
Identities = 47/83 (56%), Positives = 61/83 (73%)
Frame = +2
Query: 2 LTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVN 181
LTGI PAP+G PQIEV+FD+DA+GI+NVSA +K+TNK++ IT+ G L+ EIE MV
Sbjct: 502 LTGIAPAPKGQPQIEVSFDVDADGIINVSARDKATNKDSSITVAGSSG-LTDSEIEAMVA 560
Query: 182 EAEKYRNEDDKQKETIQAKNALE 250
+AEKYR D +KE I+ N E
Sbjct: 561 DAEKYRASDMARKEAIENGNRAE 583
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 89.4 bits (212), Expect = 4e-19
Identities = 39/83 (46%), Positives = 58/83 (69%)
Frame = +2
Query: 2 LTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVN 181
LTGIPP PRG ++E TF++DANGIL V+A+EK+T + I ITN G LS +I+ M+
Sbjct: 464 LTGIPPMPRGQAELEATFELDANGILKVTAVEKTTGRSAHIEITNSVGHLSSTKIQEMIE 523
Query: 182 EAEKYRNEDDKQKETIQAKNALE 250
A+K++ +D + ++AK+ LE
Sbjct: 524 NADKFKQQDKDFAKKLEAKSQLE 546
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 31.5 bits (68), Expect = 0.11
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 62 DANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKE--TIQA 235
D LNVS + S +E +T ++ R+ +EE +RM ++ E K+K T+Q
Sbjct: 58 DLENTLNVSGTKDSNAEEQPAKLTKEEKRVEREEAKRMASKVLIKTIERTKRKRVTTVQG 117
Query: 236 KNA 244
+A
Sbjct: 118 LDA 120
>SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog
Rhp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 963
Score = 29.5 bits (63), Expect = 0.46
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 150 SPRKRSSVWLMRQRSTETRMTSKRRPSRPRMHWNLLLQH-EVYH 278
S R+R S S+ +R +K PS R H+ L+ QH E+ H
Sbjct: 288 SKRRRVSARASSSASSSSRTQAKSIPSHERTHYRLIRQHPELEH 331
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.61
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +2
Query: 140 KGRLSKEEIERMVNEAEKYRNEDD 211
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 28.7 bits (61), Expect = 0.81
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 295 KEKISDSDKQTILD-KCNDTIKWLDSNQLADKEEYEHKQKELE 420
+EKI +++TI D K + + ++ EEY KQKEL+
Sbjct: 427 EEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQ 469
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 27.9 bits (59), Expect = 1.4
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 77 LNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 208
L VS ++S K + + K EE+E VNE E++R D
Sbjct: 257 LCVSPEKRSLAKTREAVLAVTKWTTDDEELESFVNEEEEFRASD 300
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 27.5 bits (58), Expect = 1.9
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 107 NKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 250
NK+ K T D SKEE+E +V E E D +Q + K+ L+
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILK 572
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 27.5 bits (58), Expect = 1.9
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +1
Query: 70 RYPQRFRYREVHQQGEQDHHYQRQRSS-LQGRDRAY 174
R P R +YRE H + + H R QGR +Y
Sbjct: 320 RDPDRTKYREYHSERRKQHRTDRYSDDYYQGRSYSY 355
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 26.6 bits (56), Expect = 3.3
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -1
Query: 87 ETLRIPLASMSKVTSI*GTPRGAGGIP 7
E L PLA MS TSI G G GG P
Sbjct: 76 EVLVDPLADMSAGTSIMGNNFGFGGFP 102
>SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1067
Score = 26.6 bits (56), Expect = 3.3
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = +2
Query: 83 VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA 244
V A+ KS +++ ++ G + EEI ++++ E E+D++ E N+
Sbjct: 597 VPALFKSIDQDESDILSERIGAPTAEEISQLLDSVETNEEENDEELEKAMGVNS 650
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.8 bits (54), Expect = 5.7
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 140 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 250
+G L E E NEA++ NE+ E +N E
Sbjct: 89 EGELKLENFENQENEADEAENEETSYSEQNHTENTEE 125
>SPAC1556.07 |pmm1||phosphomannomutase Pmm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 257
Score = 25.4 bits (53), Expect = 7.5
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 32 VPQIEVTFDIDANGILNVSAIEKSTNKENKITITN-DKGRLSKEEIERMVNEAEK 193
+P TF NG++N+S + ++ N E + DKGR + + ++ E K
Sbjct: 122 IPVKRGTFIEFRNGMINISPVGRNANTEERNEFERFDKGRKIRATMVDVLREKFK 176
>SPAC4H3.10c |pyk1||pyruvate kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 509
Score = 25.4 bits (53), Expect = 7.5
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 68 NGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQKETIQAKNA 244
+GIL+ + IEK +K K+ + N+ SK+ + + + +E DK KN
Sbjct: 154 DGILSFTVIEKVDDKNLKVRVNNNGKISSKKGVNLPKTDVDLPALSEKDKADLRFGVKNG 213
Query: 245 LE 250
++
Sbjct: 214 VD 215
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 25.4 bits (53), Expect = 7.5
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 98 KSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKET 226
K NK+++ + +K +L +E+ AEK N DDK + T
Sbjct: 39 KQKNKKSRNQVRREKKKLLREKTNSGAKLAEK--NSDDKDQLT 79
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.4 bits (53), Expect = 7.5
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 68 NGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 208
N + N S +KS+NKE + + RLS + + K ++ED
Sbjct: 409 NTVQNESKSQKSSNKEGRSSRGGFFSRLSFSRSSSRMKKGSKAKHED 455
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 25.4 bits (53), Expect = 7.5
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 13/86 (15%)
Frame = +2
Query: 32 VPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK------ 193
+ ++ +F + N + +I K+ N+E +K R+ E+ ++++ +K
Sbjct: 1213 IDKVRNSFFKNLNSFYEMYSIAKAENEER---FEKEKRRIMSEDRDKLIRGRQKTSIVAK 1269
Query: 194 YRN-------EDDKQKETIQAKNALE 250
YRN DDKQ + KN+LE
Sbjct: 1270 YRNKRELPEDSDDKQDTASKDKNSLE 1295
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 25.0 bits (52), Expect = 9.9
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +1
Query: 277 MEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELE 420
+E EK KEK D D++ DT+ D NQ+ +E E QKE++
Sbjct: 270 LEKEKAKEKQKDKDQE------QDTVS--DKNQI---DEIEKGQKEVD 306
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 25.0 bits (52), Expect = 9.9
Identities = 7/29 (24%), Positives = 18/29 (62%)
Frame = +1
Query: 277 MEDEKLKEKISDSDKQTILDKCNDTIKWL 363
+++++++ K+S D L+ CN+ + L
Sbjct: 260 LKEQEIRRKVSSDDVHNYLESCNNHLSML 288
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 25.0 bits (52), Expect = 9.9
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Frame = +2
Query: 56 DIDANGILNVSAIEKSTNKENKIT----ITNDKGRLSKEEIER-----MVNEAE-KYRNE 205
D+D VS IEK+T + +T N G+L K EIE ++N+ E
Sbjct: 1209 DLDTEASPVVSTIEKTTKGDVSVTEEQQSANIDGQLEKPEIEESKKPDVLNQVSLSIEEE 1268
Query: 206 DDKQKETIQAKNA 244
K KE+ NA
Sbjct: 1269 KPKNKESEVDNNA 1281
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,225,581
Number of Sequences: 5004
Number of extensions: 37511
Number of successful extensions: 208
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 205
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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