Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30901
(788 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 25 0.52
AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein. 24 1.6
AY531877-1|AAT08872.1| 247|Tribolium castaneum ORF1p protein. 23 2.1
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 3.7
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 3.7
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 23 3.7
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 3.7
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 3.7
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 3.7
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 3.7
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 23 3.7
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 3.7
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 25.4 bits (53), Expect = 0.52
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 278 ASCTPPALTPPHRPRTSATVPPA 346
A T P LTPPH P S PP+
Sbjct: 12 ADSTSPLLTPPHNPAYSP--PPS 32
>AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein.
Length = 292
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -3
Query: 414 CSVYSSQYMVKNGVDDAVDIYSGAGGTVAD 325
C Y + V VD+ +YSG G V +
Sbjct: 253 CQYYQGKNCVGGKVDETAGVYSGWEGQVLE 282
>AY531877-1|AAT08872.1| 247|Tribolium castaneum ORF1p protein.
Length = 247
Score = 23.4 bits (48), Expect = 2.1
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 305 PPHRPRTSATVPP 343
P +RPRTS T PP
Sbjct: 231 PYYRPRTSRTEPP 243
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 248 EDVQWNSGCVASCTPPALTPPHRPRTSATVPPAPL*MSTA 367
+D+ N G TPP TP + T ++ +PL +ST+
Sbjct: 114 QDLSTN-GAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTS 152
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 248 EDVQWNSGCVASCTPPALTPPHRPRTSATVPPAPL*MSTA 367
+D+ N G TPP TP + T ++ +PL +ST+
Sbjct: 114 QDLSTN-GAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTS 152
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 22.6 bits (46), Expect = 3.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 248 EDVQWNSGCVASCTPPALTPPHRPRTSATVPPAPL*MSTA 367
+D+ N G TPP TP + T ++ +PL +ST+
Sbjct: 114 QDLSTN-GAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTS 152
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 248 EDVQWNSGCVASCTPPALTPPHRPRTSATVPPAPL*MSTA 367
+D+ N G TPP TP + T ++ +PL +ST+
Sbjct: 114 QDLSTN-GAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTS 152
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 22.6 bits (46), Expect = 3.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 248 EDVQWNSGCVASCTPPALTPPHRPRTSATVPPAPL*MSTA 367
+D+ N G TPP TP + T ++ +PL +ST+
Sbjct: 114 QDLSTN-GAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTS 152
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 22.6 bits (46), Expect = 3.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 248 EDVQWNSGCVASCTPPALTPPHRPRTSATVPPAPL*MSTA 367
+D+ N G TPP TP + T ++ +PL +ST+
Sbjct: 70 QDLSTN-GAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTS 108
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 248 EDVQWNSGCVASCTPPALTPPHRPRTSATVPPAPL*MSTA 367
+D+ N G TPP TP + T ++ +PL +ST+
Sbjct: 114 QDLSTN-GAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTS 152
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 22.6 bits (46), Expect = 3.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 248 EDVQWNSGCVASCTPPALTPPHRPRTSATVPPAPL*MSTA 367
+D+ N G TPP TP + T ++ +PL +ST+
Sbjct: 114 QDLSTN-GAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTS 152
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 248 EDVQWNSGCVASCTPPALTPPHRPRTSATVPPAPL*MSTA 367
+D+ N G TPP TP + T ++ +PL +ST+
Sbjct: 114 QDLSTN-GAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTS 152
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,462
Number of Sequences: 336
Number of extensions: 3826
Number of successful extensions: 21
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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