Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30901
(788 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U22055-1|AAA80488.1| 885|Homo sapiens 100 kDa coactivator protein. 67 8e-11
BT009785-1|AAP88787.1| 910|Homo sapiens EBNA-2 co-activator (10... 67 8e-11
BC017180-1|AAH17180.3| 910|Homo sapiens staphylococcal nuclease... 67 8e-11
AB209510-1|BAD92747.1| 964|Homo sapiens EBNA-2 co-activator var... 67 8e-11
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 32 2.7
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 32 2.7
M74027-1|AAA59875.1| 573|Homo sapiens mucin protein. 31 6.3
AL136924-1|CAB66858.1| 861|Homo sapiens hypothetical protein pr... 31 6.3
AL132821-2|CAI23572.1| 944|Homo sapiens Ras and Rab interactor ... 31 6.3
AL049538-1|CAI19340.1| 944|Homo sapiens Ras and Rab interactor ... 31 6.3
AB060339-1|BAB84317.1| 895|Homo sapiens RIN2 protein. 31 6.3
>U22055-1|AAA80488.1| 885|Homo sapiens 100 kDa coactivator protein.
Length = 885
Score = 66.9 bits (156), Expect = 8e-11
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = +2
Query: 11 DVVGKRLLLNVE-IRGSPAAVTLVDPNTNIDLGKNLIKDGLVLVEQVRDSRLATLMAEYR 187
D+ + LLNVE + VTL ++ D+G L+K+GLV+VE ++ + ++ EY
Sbjct: 795 DIQNTQCLLNVEHLSAGCPHVTLQFADSKGDVGLGLVKEGLVMVEVRKEKQFQKVITEYL 854
Query: 188 AAQEHAKSSRLNLWRHGDITED 253
AQE AKS+RLNLWR+GD D
Sbjct: 855 NAQESAKSARLNLWRYGDFRAD 876
>BT009785-1|AAP88787.1| 910|Homo sapiens EBNA-2 co-activator (100kD)
protein.
Length = 910
Score = 66.9 bits (156), Expect = 8e-11
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = +2
Query: 11 DVVGKRLLLNVE-IRGSPAAVTLVDPNTNIDLGKNLIKDGLVLVEQVRDSRLATLMAEYR 187
D+ + LLNVE + VTL ++ D+G L+K+GLV+VE ++ + ++ EY
Sbjct: 820 DIQNTQCLLNVEHLSAGCPHVTLQFADSKGDVGLGLVKEGLVMVEVRKEKQFQKVITEYL 879
Query: 188 AAQEHAKSSRLNLWRHGDITED 253
AQE AKS+RLNLWR+GD D
Sbjct: 880 NAQESAKSARLNLWRYGDFRAD 901
>BC017180-1|AAH17180.3| 910|Homo sapiens staphylococcal nuclease and
tudor domain containing 1 protein.
Length = 910
Score = 66.9 bits (156), Expect = 8e-11
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = +2
Query: 11 DVVGKRLLLNVE-IRGSPAAVTLVDPNTNIDLGKNLIKDGLVLVEQVRDSRLATLMAEYR 187
D+ + LLNVE + VTL ++ D+G L+K+GLV+VE ++ + ++ EY
Sbjct: 820 DIQNTQCLLNVEHLSAGCPHVTLQFADSKGDVGLGLVKEGLVMVEVRKEKQFQKVITEYL 879
Query: 188 AAQEHAKSSRLNLWRHGDITED 253
AQE AKS+RLNLWR+GD D
Sbjct: 880 NAQESAKSARLNLWRYGDFRAD 901
>AB209510-1|BAD92747.1| 964|Homo sapiens EBNA-2 co-activator variant
protein.
Length = 964
Score = 66.9 bits (156), Expect = 8e-11
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = +2
Query: 11 DVVGKRLLLNVE-IRGSPAAVTLVDPNTNIDLGKNLIKDGLVLVEQVRDSRLATLMAEYR 187
D+ + LLNVE + VTL ++ D+G L+K+GLV+VE ++ + ++ EY
Sbjct: 874 DIQNTQCLLNVEHLSAGCPHVTLQFADSKGDVGLGLVKEGLVMVEVRKEKQFQKVITEYL 933
Query: 188 AAQEHAKSSRLNLWRHGDITED 253
AQE AKS+RLNLWR+GD D
Sbjct: 934 NAQESAKSARLNLWRYGDFRAD 955
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 31.9 bits (69), Expect = 2.7
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 272 CVASCTPPALTPPHRPRTSATVPP--APL*MSTASSTP 379
C+ + +PP TP P T+ T+PP P +T ++TP
Sbjct: 770 CITTPSPPTTTPSPPPTTTTTLPPTTTPSPPTTTTTTP 807
Score = 30.7 bits (66), Expect = 6.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 275 VASCTPPALTPPHRPRTSATVPPAPL*MSTASSTP 379
+ + TPP T P P T+ T PP S ++TP
Sbjct: 966 ITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTP 1000
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 31.9 bits (69), Expect = 2.7
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 272 CVASCTPPALTPPHRPRTSATVPP--APL*MSTASSTP 379
C+ + +PP TP P T+ T+PP P +T ++TP
Sbjct: 1395 CITTPSPPTTTPSPPPTTTTTLPPTTTPSPPTTTTTTP 1432
Score = 30.7 bits (66), Expect = 6.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 275 VASCTPPALTPPHRPRTSATVPPAPL*MSTASSTP 379
+ + TPP T P P T+ T PP S ++TP
Sbjct: 1591 ITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTP 1625
>M74027-1|AAA59875.1| 573|Homo sapiens mucin protein.
Length = 573
Score = 30.7 bits (66), Expect = 6.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 275 VASCTPPALTPPHRPRTSATVPPAPL*MSTASSTP 379
+ + TPP T P P T+ T PP S ++TP
Sbjct: 249 ITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTP 283
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 272 CVASCTPPALTPPHRPRTSATVPP--APL*MSTASSTP 379
C+ + +PP TP P ++ T+PP P +T ++TP
Sbjct: 53 CITTPSPPTTTPSPPPTSTTTLPPTTTPSPPTTTTTTP 90
>AL136924-1|CAB66858.1| 861|Homo sapiens hypothetical protein
protein.
Length = 861
Score = 30.7 bits (66), Expect = 6.3
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +2
Query: 260 WNSGCVASCTPPALTPPHRPRTSATVPPAPL 352
W+S A PP L PPHRP +S V PA L
Sbjct: 178 WSSP--ADSKPPNLPPPHRPLSSDGVCPASL 206
>AL132821-2|CAI23572.1| 944|Homo sapiens Ras and Rab interactor 2
protein.
Length = 944
Score = 30.7 bits (66), Expect = 6.3
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +2
Query: 260 WNSGCVASCTPPALTPPHRPRTSATVPPAPL 352
W+S A PP L PPHRP +S V PA L
Sbjct: 261 WSSP--ADSKPPNLPPPHRPLSSDGVCPASL 289
>AL049538-1|CAI19340.1| 944|Homo sapiens Ras and Rab interactor 2
protein.
Length = 944
Score = 30.7 bits (66), Expect = 6.3
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +2
Query: 260 WNSGCVASCTPPALTPPHRPRTSATVPPAPL 352
W+S A PP L PPHRP +S V PA L
Sbjct: 261 WSSP--ADSKPPNLPPPHRPLSSDGVCPASL 289
>AB060339-1|BAB84317.1| 895|Homo sapiens RIN2 protein.
Length = 895
Score = 30.7 bits (66), Expect = 6.3
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +2
Query: 260 WNSGCVASCTPPALTPPHRPRTSATVPPAPL 352
W+S A PP L PPHRP +S V PA L
Sbjct: 212 WSSP--ADSKPPNLPPPHRPLSSDGVCPASL 240
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,059,142
Number of Sequences: 237096
Number of extensions: 2320384
Number of successful extensions: 7154
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7110
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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