Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30901
         (788 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40029-11|AAA81130.1|  914|Caenorhabditis elegans Tudor staphylo...    59   4e-09
AC025721-11|AAK29900.1|   78|Caenorhabditis elegans Hypothetical...    29   2.9  
AC087082-1|AAG37982.2|  157|Caenorhabditis elegans Hypothetical ...    29   5.0  
U27312-9|AAA68252.1|  239|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AF125972-1|AAD14770.2|  349|Caenorhabditis elegans Hypothetical ...    28   8.8  
AC024801-12|AAF59643.4|  569|Caenorhabditis elegans Hypothetical...    28   8.8  
AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical ...    28   8.8  

>U40029-11|AAA81130.1|  914|Caenorhabditis elegans Tudor
            staphylococcal nuclease homologprotein 1 protein.
          Length = 914

 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 24/54 (44%), Positives = 36/54 (66%)
 Frame = +2

Query: 86   NTNIDLGKNLIKDGLVLVEQVRDSRLATLMAEYRAAQEHAKSSRLNLWRHGDIT 247
            N  +D+GK+LI +GL L +  R+ RL TL+ +Y   +E A+ SR N+W +GD T
Sbjct: 857  NKKVDIGKSLIAEGLALADHRREPRLQTLVNDYNTTEEVARKSRKNIWEYGDFT 910


>AC025721-11|AAK29900.1|   78|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.12 protein.
          Length = 78

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 14/35 (40%), Positives = 15/35 (42%)
 Frame = +2

Query: 269 GCVASCTPPALTPPHRPRTSATVPPAPL*MSTASS 373
           GC A   PPA  PP  P      PP P   + A S
Sbjct: 30  GCGAPPPPPACAPPPAPACGGGAPPPPAYAAPAPS 64


>AC087082-1|AAG37982.2|  157|Caenorhabditis elegans Hypothetical
           protein Y92H12BM.1 protein.
          Length = 157

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = -3

Query: 162 SRLSRTCSTNTSPSLIRFLPRSMFVLGSTRVTAAGDPRISTFKSS 28
           S++ RTC T TSPS+ R + + M          + +  + TF+S+
Sbjct: 60  SKIRRTCETQTSPSVRRVMNKVMMTGPVFAQNISPETGVVTFRSN 104


>U27312-9|AAA68252.1|  239|Caenorhabditis elegans Hypothetical
           protein F26A1.11 protein.
          Length = 239

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 553 KGCRNTYTLAYRA*FIKTYFLNLQTYFRN 639
           K C  T+T A+RA F+     NLQ  ++N
Sbjct: 203 KVCHQTWTGAFRASFVVNVLYNLQKLYKN 231


>AF125972-1|AAD14770.2|  349|Caenorhabditis elegans Hypothetical
           protein H25P19.1 protein.
          Length = 349

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 275 VASCTPPALTPPHRPRTSATVPP 343
           ++S TPP   P   PRTS + PP
Sbjct: 295 ISSPTPPKSPPKSTPRTSKSTPP 317


>AC024801-12|AAF59643.4|  569|Caenorhabditis elegans Hypothetical
           protein Y50D7A.8 protein.
          Length = 569

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 245 TEDVQWNSGCVASCTPPALTPPHRPRTSATVPPAP 349
           T+D   N   +   +  +L PP +P TS+T  P P
Sbjct: 421 TDDPYNNLSTINEPSSSSLPPPQQPSTSSTTEPVP 455


>AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical
           protein Y108G3AL.7 protein.
          Length = 1192

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +2

Query: 263 NSGCVASCTPPALTPPHRPRTSATVPPAPL*MSTASSTPFFTIYCE 400
           NS C+   T  +    H P   A+  PA L + T  S  F   YCE
Sbjct: 8   NSECLLLYTLSSTRETHSPHAVASDDPAFLALGTEVSAKFKGAYCE 53


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,140,181
Number of Sequences: 27780
Number of extensions: 351794
Number of successful extensions: 1168
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1165
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)