Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30900
(758 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0031 + 19425011-19425113,19425552-19425637,19425732-194258... 150 1e-36
02_02_0464 - 10552347-10552466,10552683-10552928,10553866-105541... 140 1e-33
08_02_1616 + 28260204-28262555 36 0.046
03_01_0577 + 4261249-4262055,4262149-4262203,4262293-4262468,426... 34 0.14
01_06_1760 - 39697079-39697162,39697280-39697340,39697415-396974... 33 0.33
08_02_0582 + 18993816-18993890,18994050-18994446,18995645-189957... 32 0.57
02_01_0670 - 4976658-4978037,4978128-4979015,4982590-4983130,498... 31 1.00
02_05_1297 - 35536193-35536312,35536405-35536467,35536610-355369... 30 1.7
02_01_0672 - 4989053-4990432,4990523-4991410,4995896-4996436,499... 30 2.3
09_06_0365 - 22582467-22583524,22584407-22584641,22585474-225856... 29 3.0
08_02_1614 - 28243532-28244589,28245149-28245383,28245524-282457... 29 3.0
02_01_0668 - 4969141-4970520,4970597-4971463 29 3.0
04_04_0118 - 22889608-22890816,22891990-22892261,22892306-228931... 29 4.0
02_02_0682 - 12923103-12923747,12924607-12924870,12924953-129252... 29 5.3
06_03_0473 + 21190878-21191188,21191269-21192355,21192972-211931... 28 7.0
06_01_0503 - 3596664-3596837,3597647-3598069,3598362-3598595,359... 28 7.0
04_04_1331 - 32706043-32707248,32707411-32707652,32707737-327085... 28 7.0
01_05_0215 + 19374279-19374327,19374629-19374633,19376902-193769... 28 7.0
>11_06_0031 +
19425011-19425113,19425552-19425637,19425732-19425829,
19425950-19426067,19426200-19426289,19426770-19427074,
19427162-19427357,19427435-19427617,19427713-19427982,
19428906-19429151,19429633-19429704,19430087-19430104
Length = 594
Score = 150 bits (363), Expect = 1e-36
Identities = 68/85 (80%), Positives = 80/85 (94%)
Frame = -1
Query: 506 GKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVVEHDFIMATYLADRVIVFE 327
GKPAD+YLIDEPSAYLDSEQR+VA+KVIKRFILHAK+T F+VEHDFIMATYLAD+VIV+E
Sbjct: 482 GKPADIYLIDEPSAYLDSEQRIVASKVIKRFILHAKKTAFIVEHDFIMATYLADKVIVYE 541
Query: 326 GTPSSNATAHAPQSLLNGMNKFLES 252
G PS + TA+APQSL++GMNKFL +
Sbjct: 542 GRPSIDCTANAPQSLVSGMNKFLSN 566
Score = 109 bits (261), Expect = 3e-24
Identities = 48/71 (67%), Positives = 61/71 (85%)
Frame = -2
Query: 739 GSSGQLPQLHISYKPQKISPKSQGLVRSLLHDKIRDAYIHPQFLTDVMKPMKIEEIMDQE 560
G+ ++P+ ++SYKPQKISPK Q VR LLH KIRD+Y HPQF++DVMKP++IE++MDQE
Sbjct: 404 GTEIEIPEFNVSYKPQKISPKFQHSVRHLLHQKIRDSYTHPQFVSDVMKPLQIEQLMDQE 463
Query: 559 VQNLSGGELQR 527
V NLSGGELQR
Sbjct: 464 VINLSGGELQR 474
Score = 62.5 bits (145), Expect = 4e-10
Identities = 32/80 (40%), Positives = 47/80 (58%)
Frame = -1
Query: 497 ADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVVEHDFIMATYLADRVIVFEGTP 318
A++++ DEPS+YLD +QRL AA+V+ R +L VVEHD + YL+D + G P
Sbjct: 235 AEIFMFDEPSSYLDVKQRLKAAQVV-RSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKP 293
Query: 317 SSNATAHAPQSLLNGMNKFL 258
+ P S+ G+N FL
Sbjct: 294 GAYGVVTLPFSVREGINIFL 313
Score = 29.1 bits (62), Expect = 4.0
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Frame = -2
Query: 700 KPQKIS--PKS-QGLVRSLLHDKIRDAYIHPQFLTDVMKPMKIEEIMDQEVQNLSGGELQ 530
KPQ + PK+ QG V +L K + + + D +++ +++D+ V +LSGGELQ
Sbjct: 169 KPQYVDHIPKAVQGNVGQVLDQK-DERGVKAELCVD----LELNQVIDRNVGDLSGGELQ 223
Query: 529 R 527
R
Sbjct: 224 R 224
>02_02_0464 -
10552347-10552466,10552683-10552928,10553866-10554135,
10554231-10554413,10554493-10554688,10554775-10555079,
10555515-10555604,10555689-10555806,10555991-10556088,
10556187-10556272,10557622-10557736
Length = 608
Score = 140 bits (338), Expect = 1e-33
Identities = 64/83 (77%), Positives = 75/83 (90%)
Frame = -1
Query: 506 GKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVVEHDFIMATYLADRVIVFE 327
GKPAD+YLIDEPSA+LDSEQRL+AAKVIKRFILH K+T FVVEHDFIMATYLAD+V+VFE
Sbjct: 486 GKPADIYLIDEPSAHLDSEQRLLAAKVIKRFILHEKKTAFVVEHDFIMATYLADKVVVFE 545
Query: 326 GTPSSNATAHAPQSLLNGMNKFL 258
G PS + A+AP+ L +GMN+FL
Sbjct: 546 GKPSVDCIANAPEPLASGMNRFL 568
Score = 74.1 bits (174), Expect = 1e-13
Identities = 41/94 (43%), Positives = 57/94 (60%)
Frame = -1
Query: 530 ASSSRAVFGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVVEHDFIMATYL 351
A ++RA+ + ADVY+ DEPS YLD +QRL AA+VI R +L K VVEHD + YL
Sbjct: 230 AIAARAM--EEADVYMFDEPSCYLDVKQRLKAAQVI-RSLLQPKNYVIVVEHDLSILDYL 286
Query: 350 ADRVIVFEGTPSSNATAHAPQSLLNGMNKFLESW 249
+D + GTP + P S+ G+N FL+ +
Sbjct: 287 SDYICCLYGTPGAYGVVTLPSSVREGINIFLDGF 320
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/66 (50%), Positives = 47/66 (71%)
Frame = -2
Query: 724 LPQLHISYKPQKISPKSQGLVRSLLHDKIRDAYIHPQFLTDVMKPMKIEEIMDQEVQNLS 545
+P+ +SYKPQ++ K VR LL +K+ + QF +DVMKP+KIE++MD++V LS
Sbjct: 413 VPEYTVSYKPQELISKYSSTVRDLLFEKVPGSCTQAQFRSDVMKPLKIEQLMDRQVPTLS 472
Query: 544 GGELQR 527
GGELQR
Sbjct: 473 GGELQR 478
Score = 56.0 bits (129), Expect = 3e-08
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = -3
Query: 252 LGITFRRDPNNFRPRINKHASVKDIEQKRAGQYFFLE 142
L +TFR+DP +RPRINK S+KD EQK AG Y++LE
Sbjct: 571 LDVTFRKDPTTYRPRINKLGSIKDAEQKAAGCYYYLE 607
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = -2
Query: 718 QLHISYKPQKIS--PKS-QGLVRSLLHDKIRDAYIHPQFLTDVMKPMKIEEIMDQEVQNL 548
++ + KPQ + PKS G V LL K D L D ++ + +++D++V L
Sbjct: 167 KMKATMKPQYLDHIPKSVTGKVGDLLSKK--DERHMKNLLCDTLE---LNQVLDRDVSAL 221
Query: 547 SGGELQR 527
SGGELQR
Sbjct: 222 SGGELQR 228
>08_02_1616 + 28260204-28262555
Length = 783
Score = 35.5 bits (78), Expect = 0.046
Identities = 24/75 (32%), Positives = 38/75 (50%)
Frame = -1
Query: 521 SRAVFGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVVEHDFIMATYLADR 342
+RA+ PA + L+DE ++ LDSE + + + RF++ RT V+ H + AD
Sbjct: 21 ARAMLRNPA-ILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHR-LSTIRKADL 76
Query: 341 VIVFEGTPSSNATAH 297
V V +G S H
Sbjct: 77 VAVLQGGAISEVGTH 91
>03_01_0577 + 4261249-4262055,4262149-4262203,4262293-4262468,
4262554-4262718,4262811-4263178,4263225-4263861,
4263952-4265844,4266325-4266672
Length = 1482
Score = 33.9 bits (74), Expect = 0.14
Identities = 29/97 (29%), Positives = 43/97 (44%)
Frame = -1
Query: 521 SRAVFGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVVEHDFIMATYLADR 342
+RA+ P + L+DEP++ LD++ V + I R L A RT V+ H + AD
Sbjct: 755 ARAIIRDPR-ILLLDEPTSALDTQSEAVVQQSIDR--LAAGRTVVVIAHR-LATVRNADT 810
Query: 341 VIVFEGTPSSNATAHAPQSLLNGMNKFLESWESPSAG 231
+ V + + HA G L S S S G
Sbjct: 811 IAVLDRGAVVESGRHADLMARRGPYSALVSLASDSGG 847
>01_06_1760 -
39697079-39697162,39697280-39697340,39697415-39697479,
39697579-39697860,39697938-39698012,39698121-39698195,
39698343-39698399,39698653-39698726,39698912-39699055,
39699608-39699662,39700027-39700149,39700276-39700320,
39701068-39701160,39701249-39701662
Length = 548
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = -1
Query: 521 SRAVFGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFIL--HAKRTGFVVEHDFIMATYLA 348
+RA+ P+ + ++DE ++ LD+E VI +F A+RT ++ H + A
Sbjct: 451 ARALLRDPS-ILVLDEATSALDAESEHYVKNVITKFSTDPKARRTVIIIAHR-LSTIQAA 508
Query: 347 DRVIVFE 327
DR+IV E
Sbjct: 509 DRIIVME 515
>08_02_0582 + 18993816-18993890,18994050-18994446,18995645-18995748,
18995863-18996004,18996118-18996237,18996341-18996465,
18996903-18997061,18997161-18997323,18997420-18997545,
18997628-18997711,18997761-18998173,18998199-18998273,
18998463-18998663,18998862-18998971,18999072-18999156,
18999365-18999493,18999596-18999701,18999825-18999913,
19000064-19000366
Length = 1001
Score = 31.9 bits (69), Expect = 0.57
Identities = 24/62 (38%), Positives = 29/62 (46%)
Frame = -1
Query: 515 AVFGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVVEHDFIMATYLADRVI 336
A+ G P VY+ DEPS LD+ R VIKR T + H A L DRV
Sbjct: 830 ALIGNPKVVYM-DEPSTGLDTTSRSNLWNVIKR--AKKNCTIILTTHSMEEAEELCDRVG 886
Query: 335 VF 330
+F
Sbjct: 887 IF 888
>02_01_0670 - 4976658-4978037,4978128-4979015,4982590-4983130,
4983209-4983845,4983962-4983992,4984094-4984324
Length = 1235
Score = 31.1 bits (67), Expect = 1.00
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Frame = -1
Query: 521 SRAVFGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVVEH------DFIMA 360
+RA+ PA + L+DE ++ LDS+ V + + R ++ RT VV H + +
Sbjct: 1137 ARAILKNPA-ILLLDEATSALDSQSEKVVQEALDRVMI--DRTSVVVAHRLSTIQNCDLI 1193
Query: 359 TYLADRVIVFEGTPSS 312
T L ++V +GT +S
Sbjct: 1194 TVLEKGIVVEKGTHAS 1209
>02_05_1297 -
35536193-35536312,35536405-35536467,35536610-35536942,
35537098-35537184,35538337-35538399,35538604-35538750,
35538900-35539001,35539069-35539197,35539506-35539664,
35539726-35539967,35540317-35540506,35540692-35540907,
35541536-35541760
Length = 691
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/56 (33%), Positives = 33/56 (58%)
Frame = -1
Query: 542 W*VTASSSRAVFGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVVEH 375
W + + +RA+F +P D+ L+DEP+ +LD L A ++ ++L +T VV H
Sbjct: 364 WRMRIALARALFIEP-DLLLLDEPTNHLD----LHAVLWLETYLLKWPKTFIVVSH 414
>02_01_0672 - 4989053-4990432,4990523-4991410,4995896-4996436,
4996532-4997168,4997266-4997320,4997439-4997675
Length = 1245
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = -1
Query: 521 SRAVFGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVVEH 375
+RA+ PA + L+DE ++ LDS+ V + + R ++ RT VV H
Sbjct: 1147 ARAILKNPA-ILLLDEATSALDSQSEKVVQEALDRVMI--GRTSVVVAH 1192
>09_06_0365 -
22582467-22583524,22584407-22584641,22585474-22585684,
22585775-22585848,22585943-22586092
Length = 575
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = -1
Query: 542 W*VTASSSRAVFGKPADVYLIDEPSAYLDSEQRLVAAKVIKRF 414
W + + +RA+F P + L+DEP+ +LD E + + +K+F
Sbjct: 197 WRMRIALARALFMNPT-ILLLDEPTNHLDLEACVWLEETLKKF 238
>08_02_1614 -
28243532-28244589,28245149-28245383,28245524-28245734,
28245834-28245907,28246465-28246665
Length = 592
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = -1
Query: 542 W*VTASSSRAVFGKPADVYLIDEPSAYLDSEQRLVAAKVIKRF 414
W + + +RA+F P + L+DEP+ +LD E + + +K+F
Sbjct: 214 WRMRIALARALFMNPT-ILLLDEPTNHLDLEACVWLEETLKKF 255
>02_01_0668 - 4969141-4970520,4970597-4971463
Length = 748
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = -1
Query: 521 SRAVFGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVVEH 375
+RA+ PA + L+DE ++ LDS+ V + + R ++ RT VV H
Sbjct: 650 ARAILKNPA-ILLLDEATSALDSQSEKVVQEALDRVMV--GRTSVVVAH 695
>04_04_0118 - 22889608-22890816,22891990-22892261,22892306-22893131,
22893311-22893534,22893620-22893936,22894035-22894294,
22894723-22894923,22895015-22895190,22895445-22895718
Length = 1252
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = -1
Query: 521 SRAVFGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVVEH 375
+RAV PA V L+DE ++ LD+E V + ++R + RT +V H
Sbjct: 1160 ARAVLKDPA-VLLLDEATSALDAESECVLQEALERIM--KGRTAVLVAH 1205
>02_02_0682 - 12923103-12923747,12924607-12924870,12924953-12925219,
12925301-12925529,12925614-12926295,12926409-12926682,
12926822-12927347,12927460-12927698,12927799-12927896,
12928017-12928020,12928657-12928832,12929593-12929647,
12930787-12931047
Length = 1239
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = -1
Query: 521 SRAVFGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVVEHDFIMATYLADR 342
+RA+ P V L+DE ++ LDSE + + + R ++ RT +V H T AD+
Sbjct: 1147 ARAILKDPK-VLLLDEATSALDSESERIVQEALDRVMV--GRTTVIVAHRLSTITG-ADK 1202
Query: 341 VIVFE 327
+ V +
Sbjct: 1203 IAVIK 1207
>06_03_0473 +
21190878-21191188,21191269-21192355,21192972-21193194,
21193286-21193356,21193385-21193441,21193442-21194056,
21194168-21194237,21194470-21194745,21194916-21195130,
21195224-21195529,21195750-21195813,21195902-21196141,
21196306-21196415
Length = 1214
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = -1
Query: 521 SRAVFGKPADVYLIDEPSAYLDSEQR----LVAAKVIKRFILHAKRTGFVVEHDFIMATY 354
+RAV+ ADVYL+D+P + +D+ V A K +L + F+ E D I+
Sbjct: 509 ARAVYSD-ADVYLLDDPFSAVDAHTAAVLFYVRALSEKTVVLVTHQVEFLTETDRILPYQ 567
Query: 353 LADRVIVFEGTP 318
+++ P
Sbjct: 568 RVSKILQMNDLP 579
>06_01_0503 -
3596664-3596837,3597647-3598069,3598362-3598595,
3598720-3598993,3599390-3599523,3599572-3599634,
3599759-3599846,3599919-3599989,3600898-3601010,
3601836-3602004,3602580-3602671,3602819-3603295,
3603736-3604090
Length = 888
Score = 28.3 bits (60), Expect = 7.0
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = -3
Query: 693 KRFHRNHRDLSGAYCM 646
+RFHR+HR SG++C+
Sbjct: 52 RRFHRSHRFCSGSFCV 67
>04_04_1331 - 32706043-32707248,32707411-32707652,32707737-32708562,
32708640-32708863,32708946-32709262,32709381-32709443,
32709465-32709640,32710609-32710985,32711416-32711470,
32711614-32711913
Length = 1261
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = -1
Query: 521 SRAVFGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVVEH 375
+RAV PA + L+DE ++ LD+E V + ++R L RT +V H
Sbjct: 1170 ARAVLKDPA-ILLLDEATSALDAESECVLQEALER--LMKGRTTVLVAH 1215
>01_05_0215 + 19374279-19374327,19374629-19374633,19376902-19376956,
19377159-19377334,19378020-19378241,19378334-19378572,
19379201-19379726,19379801-19380074,19380524-19381187,
19381604-19381832,19381924-19382190,19382308-19382496,
19382664-19383308
Length = 1179
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = -1
Query: 521 SRAVFGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVVEH 375
+RAV P V L+DE ++ LDSE V + + R ++ RT VV H
Sbjct: 1087 ARAVIKDPK-VLLLDEATSALDSESERVVQEALDREVV--GRTTVVVAH 1132
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,232,364
Number of Sequences: 37544
Number of extensions: 382297
Number of successful extensions: 829
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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