Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30898
         (758 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    27   0.12 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    27   0.16 
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    27   0.21 
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    27   0.21 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    27   0.21 
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    27   0.21 
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    27   0.21 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           27   0.21 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    27   0.21 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.50 
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    25   0.87 
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    24   1.1  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    24   1.5  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   2.0  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    23   2.0  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          23   2.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.6  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   6.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   6.1  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   6.1  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +1

Query: 358 THSTSPCTSHAPKPAPSSGQQSL-SPKLTSQRRIATPSAKRQNNNIQCSKT 507
           T   S  TS   KPA S+  Q+L SP  ++    +T  A   NNN + S++
Sbjct: 144 TSPLSVSTSPPGKPATSTTSQNLSSPASSTSSTSSTEKAGTNNNNSKSSQS 194


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 17/52 (32%), Positives = 29/52 (55%)
 Frame = +1

Query: 1   SLATHALIHYFINIINMSTYANNEYIIATNNSINENRYNAEKMKNSGIKALL 156
           +L TH LI+ F+ + + S   + E  +  N   N  ++NA K+KN  +K L+
Sbjct: 47  TLCTH-LIYSFVGLGDDSRIKHLEPNLDVNQG-NLKKFNALKLKNPNLKTLV 96


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +1

Query: 358 THSTSPCTSHAPKPAPSSGQQSL-SPKLTSQRRIATPSAKRQNNN 489
           T   S  TS   KPA S+  Q+L SP  ++    +T  A   NNN
Sbjct: 144 TSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNN 188


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +1

Query: 358 THSTSPCTSHAPKPAPSSGQQSL-SPKLTSQRRIATPSAKRQNNN 489
           T   S  TS   KPA S+  Q+L SP  ++    +T  A   NNN
Sbjct: 144 TSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNN 188


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +1

Query: 358 THSTSPCTSHAPKPAPSSGQQSL-SPKLTSQRRIATPSAKRQNNN 489
           T   S  TS   KPA S+  Q+L SP  ++    +T  A   NNN
Sbjct: 144 TSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNN 188


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +1

Query: 358 THSTSPCTSHAPKPAPSSGQQSL-SPKLTSQRRIATPSAKRQNNN 489
           T   S  TS   KPA S+  Q+L SP  ++    +T  A   NNN
Sbjct: 144 TSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNN 188


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +1

Query: 358 THSTSPCTSHAPKPAPSSGQQSL-SPKLTSQRRIATPSAKRQNNN 489
           T   S  TS   KPA S+  Q+L SP  ++    +T  A   NNN
Sbjct: 100 TSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNN 144


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +1

Query: 358 THSTSPCTSHAPKPAPSSGQQSL-SPKLTSQRRIATPSAKRQNNN 489
           T   S  TS   KPA S+  Q+L SP  ++    +T  A   NNN
Sbjct: 144 TSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNN 188


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +1

Query: 358 THSTSPCTSHAPKPAPSSGQQSL-SPKLTSQRRIATPSAKRQNNN 489
           T   S  TS   KPA S+  Q+L SP  ++    +T  A   NNN
Sbjct: 144 TSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNN 188


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.4 bits (53), Expect = 0.50
 Identities = 15/69 (21%), Positives = 30/69 (43%)
 Frame = +1

Query: 202  AKAIDTCHEDAQNSSNELWNARSTKRWKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCT 381
            A + +  H D     +  W++ +T  W   +    +++T   +P T   +TR  +T+  T
Sbjct: 1025 ASSTEHMHPDWTTKPSTWWSSTTTSPWWTTTTTRRTTTT---RPTTTSTTTRPTTTNWPT 1081

Query: 382  SHAPKPAPS 408
                 P P+
Sbjct: 1082 QGTTIPPPA 1090


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -1

Query: 341 KVTGFILIVDEESGTGLARFHLFVDLAFQSSLLEF 237
           K+    LI++ E+    +R HLFV   F +S L F
Sbjct: 115 KLQNVSLIINYENQRTRSRIHLFVRYVFVTSYLLF 149


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = -1

Query: 230 SSWHVSIALAGTRFVVFLIIFISGRSSALMPLFF-IFSALYLFSLIELFVAMI 75
           S W V+I L     V+F  + + G S++ + +FF  F  +Y+ S + +FV  I
Sbjct: 137 SFWAVTIFLVLAASVIFFDVVVWGLSASDLGVFFKRFLPVYV-SYLLIFVQQI 188


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 467 VPSGRTTTSSAPRPWVQA*MQHATRISVFRE 559
           VP G  T    PR +  + ++   R++ FRE
Sbjct: 169 VPEGSRTPIEIPRDYTASDLEEEHRLAYFRE 199


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 349 STRTHSTSPCTSHAPKPAPSS 411
           S+R+H   P T   P+PAP+S
Sbjct: 246 SSRSHQ--PATKSKPRPAPAS 264


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 397 PAPSSGQQSLSPKLTSQRRIATPSA 471
           P  S  + S+SP+ TS    A+P A
Sbjct: 151 PKTSPNEASMSPQSTSSNNSASPKA 175


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 397 PAPSSGQQSLSPKLTSQRRIATPSA 471
           P  S  + S+SP+ TS    A+P A
Sbjct: 171 PKTSPNEASMSPQSTSSNNSASPKA 195


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -2

Query: 631  STWHLRIIKANITDGCRNQRTFTGFTEDTDPG 536
            +T+H+RI+  N         T T  T +  PG
Sbjct: 965  TTYHIRIVAENEIGSSEPSETVTIITAEEVPG 996


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/45 (24%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -1

Query: 191 FVVFLI--IFISGRSSALMPLFFIFSALYLFSLIELFVAMIYSLL 63
           F++F +  +F+      ++PLFF+    Y +    +F   +  LL
Sbjct: 120 FIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFIIFTVHLLFLL 164


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 476 GRTTTSSAPRPWV 514
           G+  T  APRPW+
Sbjct: 207 GQLLTYRAPRPWI 219


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/55 (20%), Positives = 24/55 (43%)
 Frame = +1

Query: 163 LMKMIKKTTKRVPAKAIDTCHEDAQNSSNELWNARSTKRWKRASPVPLSSSTIKM 327
           L K +K         + D+C +  +NS +++ N  ++      +P P +   + M
Sbjct: 390 LAKHVKTHNGNGKKGSSDSCSDSEENSQSDITNNVNSPASMNQTPPPTAQMGLDM 444


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 476 GRTTTSSAPRPWV 514
           G+  T  APRPW+
Sbjct: 207 GQLLTYRAPRPWI 219


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,335
Number of Sequences: 336
Number of extensions: 3615
Number of successful extensions: 29
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)