Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30898
(758 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1245 + 35223504-35224778 36 0.046
08_01_1056 + 10752363-10752503,10752711-10752771,10753483-107536... 33 0.33
04_01_0481 - 6302066-6303118 33 0.33
10_08_0849 + 21040043-21040199,21040620-21040678,21040925-210424... 32 0.43
06_01_0587 - 4211917-4212021,4212250-4212478,4213426-4213759,421... 31 1.3
02_01_0142 - 1022387-1022518,1022627-1022671,1022750-1022850,102... 31 1.3
03_05_0670 - 26594292-26594785,26595222-26595531 30 1.7
04_03_0895 + 20633554-20634480 29 3.0
05_03_0475 + 14486969-14487140,14487215-14487338,14487424-144875... 29 4.0
01_05_0339 + 21135250-21135467,21136465-21137513,21137905-21138962 29 4.0
10_07_0188 + 13921731-13921938,13922076-13922338,13922463-13923257 29 5.3
06_03_0355 + 19822110-19824491 29 5.3
06_01_0292 + 2136637-2137050,2137162-2137671 29 5.3
04_04_1704 - 35481041-35481461,35481682-35481810,35482291-354823... 29 5.3
03_06_0327 - 33158131-33158315,33158586-33158639,33159149-331591... 29 5.3
03_04_0090 + 17228253-17228403,17229062-17229129,17229238-172309... 29 5.3
09_06_0192 - 21450158-21450276,21451084-21451573,21451750-214518... 28 7.0
07_03_0234 + 15561003-15561482,15562495-15562590,15562663-15562758 28 7.0
06_03_0336 + 19671500-19672150,19672681-19673301 28 7.0
05_01_0314 - 2466617-2467060 28 7.0
03_05_0172 - 21488504-21488752,21488862-21489611,21489691-214897... 28 7.0
02_02_0219 + 7985152-7985575,7985818-7985894,7986067-7986127,798... 28 7.0
01_05_0073 - 17899175-17899756 28 7.0
10_05_0011 - 7822847-7822880,7823653-7823754,7823859-7824106,782... 28 9.3
09_04_0754 - 19946423-19947061,19947315-19947429,19947509-199475... 28 9.3
08_01_0423 + 3740344-3740408,3740949-3741015,3742110-3742218,374... 28 9.3
06_03_0230 - 18485721-18485821,18485908-18485976,18490113-18490503 28 9.3
06_01_0844 - 6411121-6411129,6411671-6411796,6411980-6412043,641... 28 9.3
05_02_0073 + 6336649-6336710,6336846-6336894,6338079-6338468,633... 28 9.3
05_01_0146 - 953957-956278,956468-956786,957185-957213 28 9.3
04_01_0011 + 207319-207605,207935-208184,208559-208729 28 9.3
01_01_1021 + 8061007-8061150,8061244-8061708 28 9.3
>02_05_1245 + 35223504-35224778
Length = 424
Score = 35.5 bits (78), Expect = 0.046
Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 3/97 (3%)
Frame = +1
Query: 274 KRWKRASPVPLSSSTIKMKPVTLCR---STRTHSTSPCTSHAPKPAPSSGQQSLSPKLTS 444
KR + +P P + K +C+ S T S + S A P Q SP+ T+
Sbjct: 6 KRKPKPNPEPEEKEKEEEKDHRMCKTKSSVATASMAASASTATTPRKHQHQHQRSPRATA 65
Query: 445 QRRIATPSAKRQNNNIQCSKTVGASLNATRDQDQCLP 555
+ T S+ + S + ASL A RD LP
Sbjct: 66 TQYSTTSSSSAPSTATATSSSTAASLQALRDSLPDLP 102
>08_01_1056 +
10752363-10752503,10752711-10752771,10753483-10753620,
10754667-10754883,10755760-10755861,10756030-10756133,
10756383-10756483,10756563-10756607,10756724-10756855
Length = 346
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +1
Query: 46 NMSTYANNEYIIATNNSINENRYNAEKMKNSGIKALLRPLMKMIKKTTKRVPAKAIDTCH 225
NMS +AN E ++ N ++ + N GI L R +MK + +++ + T H
Sbjct: 213 NMSNFANREDLLGQNKKAADDMSRVAGLDNQGIVGLQRQIMKEQDEGLEKLEETVLSTKH 272
>04_01_0481 - 6302066-6303118
Length = 350
Score = 32.7 bits (71), Expect = 0.33
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Frame = +1
Query: 40 IINMSTYANNEYIIATNNSINENRYNAEKMKNSGIKA---LLRPLMKMIKKTTKRVPAKA 210
I+ +++ +E I+ I+E+ + E +S K+ LL P + I +P +
Sbjct: 204 ILENNSFGRSEAILEVE-VIHEDPLHVESEPDSTAKSSFQLLEPEEEEIHPP--EIPFQF 260
Query: 211 IDTCHEDAQNSSNELWNARSTKRWKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHA 390
D +ED N+ N ++ + + V SS + KP+ T HS+ S
Sbjct: 261 RDDLYEDYGNTLNYSSKMKAHPKHEPFEEVMFVSSFVSSKPIDHLHETERHSS---LSIK 317
Query: 391 PKPAPS 408
PKP PS
Sbjct: 318 PKPCPS 323
>10_08_0849 +
21040043-21040199,21040620-21040678,21040925-21042494,
21042583-21042710,21042793-21043033,21043160-21043710
Length = 901
Score = 32.3 bits (70), Expect = 0.43
Identities = 43/168 (25%), Positives = 69/168 (41%), Gaps = 15/168 (8%)
Frame = +1
Query: 61 ANNEYIIATNNSINENRY-NAEKMKNSGIKALLRPLMKMIKKTT---KRVPAKAIDTCHE 228
+NNE + N + N K +NS + L P + + + KR + T +
Sbjct: 254 SNNELFLKLLQKPNSHILDNIRKYQNSRLTTKLEPDKSLGRSSILEEKRGSNHELATKAQ 313
Query: 229 DAQNSSNELWNA-RSTKRWK--RAS-PVPLSSSTIKMKPVTLCRSTRTHSTS-------P 375
+ W RS ++ K RA+ P P+S I +KP R T +TS P
Sbjct: 314 GKETKHVFFWRKDRSDRKQKPERANRPQPVSKIVI-LKPNQGRRIDETETTSSRYLHQQP 372
Query: 376 CTSHAPKPAPSSGQQSLSPKLTSQRRIATPSAKRQNNNIQCSKTVGAS 519
CTS AP+ + + ++ + +I T +KR+ N I G S
Sbjct: 373 CTSQAPEFSGRESSKFSIKEVRRRFKIVTGDSKREKNAIPAENLPGDS 420
>06_01_0587 -
4211917-4212021,4212250-4212478,4213426-4213759,
4215116-4215186,4215374-4215493,4216353-4216771,
4216885-4217336,4217434-4217812
Length = 702
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 168 EDDQEDNETGSRQGDRHVPRGRTELEQRALERKIYEEMEACQ 293
E+++E+ G GD+ P G + RALER++YE ++ Q
Sbjct: 330 EEEEEEEYGGGGGGDKSPPHGG--VSARALERRLYELLQKRQ 369
>02_01_0142 -
1022387-1022518,1022627-1022671,1022750-1022850,
1023102-1023205,1023352-1023453,1024190-1024404
Length = 232
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +1
Query: 46 NMSTYANNEYIIATNNSINENRYNAEKMKNSGIKALLRPLMKMIKKTTKRVPAKAIDTCH 225
NMS +AN E ++ + ++ + N GI +L R +MK + +++ + T H
Sbjct: 99 NMSNFANREDLLGQSKKAADDMSRVAGLDNQGIVSLQRQVMKEQDEGLEKLEETVLSTKH 158
>03_05_0670 - 26594292-26594785,26595222-26595531
Length = 267
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Frame = +1
Query: 256 WNARSTKRWKRASPVPLSSSTIKMKPVTLCRS---------TRTHSTSPCTSHAPKPAPS 408
W + RW++ SP S I+ P TL + T H TS TS A PAP+
Sbjct: 95 WGEENRVRWRKFSPSLARSPAIREPPPTLATAAPRQFPSLKTLAHRTSLFTSSANAPAPA 154
>04_03_0895 + 20633554-20634480
Length = 308
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Frame = +1
Query: 379 TSHAPKPAPSSGQQSLSPKLTSQRRIATPSAKRQNNNIQC----SKTVGASLNATRDQDQ 546
+S +P P+PSSGQ P T +R++ P R N ++ + GA+ A + Q
Sbjct: 5 SSTSPSPSPSSGQHQQQP-TTPRRQLQGPRPPRLNVRMESHAIKKPSSGAAAAAAQAQAH 63
Query: 547 CLP 555
LP
Sbjct: 64 QLP 66
>05_03_0475 +
14486969-14487140,14487215-14487338,14487424-14487559,
14487663-14488997
Length = 588
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/75 (26%), Positives = 31/75 (41%)
Frame = +1
Query: 199 PAKAIDTCHEDAQNSSNELWNARSTKRWKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPC 378
P C + A ARS + ASP P + + V++ + P
Sbjct: 286 PRSTAPACQQPAATRRGANSVARSGSTPRAASPSP------RARDVSIAAGASRVAPPPM 339
Query: 379 TSHAPKPAPSSGQQS 423
+S P+ AP+SG+QS
Sbjct: 340 SSSKPRQAPASGKQS 354
>01_05_0339 + 21135250-21135467,21136465-21137513,21137905-21138962
Length = 774
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +1
Query: 85 TNNSINENRYN-AEKMKNSGIKALLRPLMKMIKKTTKRVPAKA--IDTCHEDAQNSSNEL 255
++++ R N + +NS K RPL K+ K + VPA + + H AQ S ++
Sbjct: 278 SHSATKRKRSNIGQAYENSRKKDRRRPLSKLCKDSAVAVPAYSHWDPSGHSSAQYSGGKM 337
Query: 256 WNARSTKRWKRASPVPLSS 312
NA R K P+ +++
Sbjct: 338 SNAFEPSRGKFGFPLDVNN 356
>10_07_0188 + 13921731-13921938,13922076-13922338,13922463-13923257
Length = 421
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 295 PVPLSSSTIKMKPVTLC---RSTRTHSTSPCTSHAPKPAP 405
P P+++ST+ P+T ST T + +P ++ P P P
Sbjct: 267 PPPIAASTLDKAPITSTDHGASTNTSAATPVANNKPPPPP 306
>06_03_0355 + 19822110-19824491
Length = 793
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/89 (19%), Positives = 37/89 (41%)
Frame = +1
Query: 289 ASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATPS 468
A+ V +++ + VT + + T+P T A ++ + ++ T + + TPS
Sbjct: 681 ATGVEVTTPATEKVEVTTPATEKVEVTTPATEEAKITTAATEEVEVTTPATEEVEVTTPS 740
Query: 469 AKRQNNNIQCSKTVGASLNATRDQDQCLP 555
K I ++ + AT + + P
Sbjct: 741 TKEVEVTIAATEEAEVTTPATEEAEVSTP 769
>06_01_0292 + 2136637-2137050,2137162-2137671
Length = 307
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +1
Query: 355 RTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATPSAKRQNNNIQCSKTVGASLNAT 531
R +P + A PSS + S RR+AT A Q N+ QC +++++
Sbjct: 200 RALKAAPSPASASAMQPSSSAAATLTMCPSCRRVATAGAPHQPNHQQCHPKSNTTISSS 258
>04_04_1704 -
35481041-35481461,35481682-35481810,35482291-35482397,
35482515-35482583,35482825-35482936,35483013-35483131,
35483211-35483291,35483629-35483700,35484039-35484239,
35484442-35484528,35485284-35485523,35485991-35486455,
35487434-35487556,35487643-35487769,35487851-35487919,
35488061-35488189,35488628-35488722,35488808-35488876,
35489332-35489443,35489545-35489663,35489753-35489833,
35490898-35490969,35491052-35491267,35491524-35491601,
35491694-35491831,35492403-35492414,35492639-35492872,
35493076-35493130,35493222-35493352,35493813-35494546,
35494613-35494820
Length = 1634
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 292 SPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPS 408
+P PL++ T L R TRTH P + P P P+
Sbjct: 21 APTPLAAPTPNGLNDRLLRLTRTHQRGPSQNPNPNPNPN 59
>03_06_0327 -
33158131-33158315,33158586-33158639,33159149-33159180,
33159275-33159369,33159466-33159539,33159643-33159778,
33159874-33159937,33160017-33160079,33160160-33160299,
33160487-33160627,33160747-33160868,33160947-33161112,
33161194-33161313,33161580-33161651,33161787-33161843,
33162036-33162152,33162231-33162369,33162794-33162900,
33162972-33163081,33163172-33163305,33163397-33163546,
33163635-33163840,33166123-33166818
Length = 1059
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +1
Query: 280 WKRASP-VPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTS 444
++ SP VP+ + PVT+ +HS++P AP+ S +P T+
Sbjct: 93 YRAPSPGVPVIGGYARSTPVTIRAPPPSHSSAPAPYQPAAAAPAPSSSSTAPSATA 148
>03_04_0090 +
17228253-17228403,17229062-17229129,17229238-17230902,
17231002-17231143,17231648-17232399
Length = 925
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +1
Query: 307 SSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATPSAKRQNN 486
S S + +++ S + S+S C+S + QQ LS + +R P Q
Sbjct: 78 SKSMTENSSLSMESSRASSSSSSCSSFSSTDINRPIQQELS-YINKERFAGKPPRSSQTK 136
Query: 487 NIQCSKT 507
+++CSKT
Sbjct: 137 SVKCSKT 143
>09_06_0192 -
21450158-21450276,21451084-21451573,21451750-21451862,
21451992-21452376,21452461-21452529,21453165-21453264,
21454465-21454637,21454737-21454782,21454879-21454954,
21455160-21455196,21455799-21456041
Length = 616
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 295 PVPLSSSTIKMKPVTLCRSTR--THSTSPCTSHAPKPAPSSGQQSLSPKLTSQR 450
PV +SST + P + S+ TH+ + TSH+ P PSS + S +T+ R
Sbjct: 473 PVLTTSSTALIHPSSTETSSEQPTHNGTASTSHSAGPQPSSAPYA-SSTITTHR 525
>07_03_0234 + 15561003-15561482,15562495-15562590,15562663-15562758
Length = 223
Score = 28.3 bits (60), Expect = 7.0
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +1
Query: 268 STKRWKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQ 447
S + RA P SSS+ P T + + +SP +S +P PAP S SP + +
Sbjct: 36 SARARARAGPSSPSSSS----PSTPTAAGLSFLSSPGSSASPNPAPRSRSSRRSPLASPR 91
Query: 448 RRIATP 465
A+P
Sbjct: 92 TGTASP 97
>06_03_0336 + 19671500-19672150,19672681-19673301
Length = 423
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3
Query: 348 PAQGHRFHLDCRRGKRHRTGTLPSLRRSCVPK 253
P+ GH FH+DC H T P RR P+
Sbjct: 165 PSCGHLFHVDCIDMWLHAHRTCPLCRRDLSPE 196
>05_01_0314 - 2466617-2467060
Length = 147
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +1
Query: 109 RYNAEKMKNSGIKALLRP--LMKMIKKTTKRVPAKAIDTCHEDAQNSSNELWNARSTKRW 282
R +A +K + ++ P +M T+ R+ A+ ID+ E+ Q LW A +T+R
Sbjct: 17 RADAAVLKKKQPRRIVAPRRCARMSVATSVRLAAEVIDS--EERQQQPTPLWPAGATRRR 74
Query: 283 KRASPVPLSSSTIKMKPV 336
+ + +S+ PV
Sbjct: 75 RLQETIAANSARCGTAPV 92
>03_05_0172 -
21488504-21488752,21488862-21489611,21489691-21489789,
21489862-21490776,21490847-21490976,21491438-21491583,
21491801-21491896,21492521-21492613,21492702-21492755,
21492897-21492956,21493046-21493171,21493283-21493366,
21493444-21493587,21493667-21493963
Length = 1080
Score = 28.3 bits (60), Expect = 7.0
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 4/125 (3%)
Frame = +1
Query: 160 PLMKMIKKTTKRVPAKAIDTCHEDAQNSSNELWNARSTKRW--KRASPVPLSSST--IKM 327
P K KT++ ID C + Q L + + + R S + +S+S M
Sbjct: 500 PCSKGNPKTSEEDDQPVIDDCEDPIQEEHEVLSSTKVDQDLVSDRKSFLSVSASPHLSPM 559
Query: 328 KPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATPSAKRQNNNIQCSKT 507
+ TLC S + H+ + + +P +PS S P R+ A S+ Q++ + + +
Sbjct: 560 QDPTLCSSPKIHNKARKSITSPGLSPSKLSVSDCPGDEVSRKSAVRSS-LQSSKLSPTDS 618
Query: 508 VGASL 522
+ ASL
Sbjct: 619 LAASL 623
>02_02_0219 +
7985152-7985575,7985818-7985894,7986067-7986127,
7986276-7986519,7986613-7987006,7987292-7987729
Length = 545
Score = 28.3 bits (60), Expect = 7.0
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Frame = +1
Query: 322 KMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATPSAKRQNNNIQCS 501
+ K V R T T +T+P P+ +P Q +LSP T+ AKR + +
Sbjct: 402 QQKHVEQPRMTPTTTTTPAGKRPPEWSPPDLQLTLSP-TTAPAAADGGGAKRSKTSTTTT 460
Query: 502 KTVGA---SLNATRDQDQC 549
T A A ++ D+C
Sbjct: 461 NTTAAISGEQEAEKNMDRC 479
>01_05_0073 - 17899175-17899756
Length = 193
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +1
Query: 304 LSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATPSAKRQ 480
+S++ ++ P S + S S + KP+PS+ PKL+ +R+ A+ A RQ
Sbjct: 42 VSTALSQLVPTIFSMSMKVEKRSSSESMSSKPSPSA--LPTRPKLSGKRKAASDLAWRQ 98
>10_05_0011 -
7822847-7822880,7823653-7823754,7823859-7824106,
7824195-7824240,7824368-7825984,7826673-7826797,
7826915-7829083
Length = 1446
Score = 27.9 bits (59), Expect = 9.3
Identities = 24/100 (24%), Positives = 40/100 (40%)
Frame = +1
Query: 232 AQNSSNELWNARSTKRWKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSS 411
++N E W++ + + +A ++S ++ + S HS P +P SS
Sbjct: 341 SKNGLQEEWSSVNFQNRDQAFTNKMTSPDLEQRQHATLNSMNLHSAPPSAQPSPSHDGSS 400
Query: 412 GQQSLSPKLTSQRRIATPSAKRQNNNIQCSKTVGASLNAT 531
G + + K TS +R AT S T A N T
Sbjct: 401 GTMN-NLKFTSFQR-ATKSVYDHQEKFSYGSTSAAINNHT 438
>09_04_0754 -
19946423-19947061,19947315-19947429,19947509-19947587,
19947863-19948007
Length = 325
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +1
Query: 280 WKRASPV--PLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLT 441
++R P+ P+ +S +KP STRT S + +S + P S S T
Sbjct: 99 FQRELPILQPVKTSRFSIKPEPTSTSTRTESPTSSSSKSATPTARSSSSSSKKNFT 154
>08_01_0423 +
3740344-3740408,3740949-3741015,3742110-3742218,
3742320-3742447,3742899-3743324
Length = 264
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +1
Query: 349 STRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATPSAKRQNNNIQCS 501
ST + PCTS P P S S K+ S +I S+ + N +CS
Sbjct: 25 STCLAAGRPCTSSLSSPTPQMRNDSHSRKINSFEQIRFVSS--EQNKFRCS 73
>06_03_0230 - 18485721-18485821,18485908-18485976,18490113-18490503
Length = 186
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -1
Query: 488 LLFCRLALGVAMRRCEVSFGLRDCCPEEGAG--FGACEVHG 372
L+ C L LG+ +++ ++ + CCP A + +C G
Sbjct: 7 LIMCALVLGLVLQQEKIHVEAKSCCPSTSARNVYNSCRFAG 47
>06_01_0844 - 6411121-6411129,6411671-6411796,6411980-6412043,
6412568-6412695,6412855-6412971,6414936-6415475,
6415554-6417344,6418359-6421407,6421765-6421823,
6422738-6422791
Length = 1978
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 527 QHATRISVFRETSECPLVSATVCDVSFNNSQVPCRL 634
QHA ++ R S+ P + TV DV N V CR+
Sbjct: 1326 QHAATSALVRLLSDNPSRALTVADVEMNAVDVLCRI 1361
>05_02_0073 +
6336649-6336710,6336846-6336894,6338079-6338468,
6338677-6338902,6338983-6339270,6339594-6339967,
6340044-6340736
Length = 693
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 406 SSGQQSLSPKLTSQRRIATPSAKRQNNNIQCSKTVGASLNATRDQD 543
SS L P + +R P Q++N +C+KT S D D
Sbjct: 558 SSTNYDLKPNKKNFKRCGKPKTLPQSHNDKCNKTKAKSTAQVHDSD 603
>05_01_0146 - 953957-956278,956468-956786,957185-957213
Length = 889
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 352 TRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATPSAKRQNNN 489
+R ++P ++H P PSS + +P T + TPS R NN
Sbjct: 19 SRGRPSTPSSNHRPS-TPSSIHRPSTPGATRRSIGGTPSTPRSRNN 63
>04_01_0011 + 207319-207605,207935-208184,208559-208729
Length = 235
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = -1
Query: 458 AMRRCEVSFGLRDCCPEEGAGFGACEVHG-DVECVLVDRHKVTGFILIVDEESGTGLARF 282
A+RR V CC A H + +VD H++ G + DEE L F
Sbjct: 30 ALRRTAVLHRYVGCCHNINASAPDFRPHQINAALDIVDNHRLDGVLYFADEEGVYSLHLF 89
Query: 281 H 279
H
Sbjct: 90 H 90
>01_01_1021 + 8061007-8061150,8061244-8061708
Length = 202
Score = 27.9 bits (59), Expect = 9.3
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = +1
Query: 283 KRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSS--GQQSLSPKLTSQRRI 456
+R + V + S +++P +T + S SP T+ P PA ++ + + S KL
Sbjct: 37 RRVALVVRAQSEPEVEPTKEETATSSSSPSPATTPTPSPAAAAPKAKPAASTKLWDVLAF 96
Query: 457 ATPSAKRQNNNIQCSKTVGA-SLNATR 534
+ P+ +R N + V A ++ A+R
Sbjct: 97 SGPAPERINGRLAMVGFVSALAVEASR 123
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,039,572
Number of Sequences: 37544
Number of extensions: 417668
Number of successful extensions: 1841
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1830
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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