Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30898
(758 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 25 0.58
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 24 1.3
DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein ... 23 3.1
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 3.1
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 3.1
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 3.1
AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein ... 23 3.1
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 22 5.4
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 5.4
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 7.2
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 7.2
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 21 9.5
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 21 9.5
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 21 9.5
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 25.4 bits (53), Expect = 0.58
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 450 AHCYTECQAAEQQH-PVLQDRGCKLECNTRPG 542
AHCY + + QQH PV +R +L + +PG
Sbjct: 245 AHCYFDIEPTVQQHQPVTVNR--QLNSDVQPG 274
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 24.2 bits (50), Expect = 1.3
Identities = 9/21 (42%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +3
Query: 513 CKLECNTRP-GSVSSVKPVNV 572
C+ + TRP G ++S+ P+NV
Sbjct: 21 CRYDKMTRPPGEINSINPINV 41
>DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein 6
protein.
Length = 125
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +1
Query: 175 IKKTTKRVPAKAIDTCHEDAQNSSNELWNARSTKR---WKRAS 294
+KK + + C+E ++++N++ N TKR W+R S
Sbjct: 60 LKKILPDALSTGCNKCNEKQKHTANKVVNYLKTKRPKDWERLS 102
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 34 INIINMSTYANNEYIIA-TNNSINENRYNAEKMKN 135
I+ ++ +T NN Y NN+ N N YN + N
Sbjct: 81 ISSLSNNTIHNNNYKYNYNNNNYNNNNYNKKLYYN 115
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 34 INIINMSTYANNEYIIA-TNNSINENRYNAEKMKN 135
I+ ++ +T NN Y NN+ N N YN + N
Sbjct: 81 ISSLSNNTIHNNNYKYNYNNNNYNNNNYNKKLYYN 115
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +1
Query: 40 IINMSTYANNEYIIATNNSINENRYNAEKM 129
I N + Y NN Y NN N N N +K+
Sbjct: 323 IHNNNNYNNNNYNNNYNNYNNNNYNNYKKL 352
>AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein
protein.
Length = 125
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +1
Query: 175 IKKTTKRVPAKAIDTCHEDAQNSSNELWNARSTKR---WKRAS 294
+KK + + C+E ++++N++ N TKR W+R S
Sbjct: 60 LKKILPDALSTGCNKCNEKQKHTANKVVNYLKTKRPKDWERLS 102
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +1
Query: 37 NIINMSTYANNEYIIATNNSINENRYNAEK 126
++ N + + NN Y NN N N N K
Sbjct: 84 SLSNKTIHNNNNYKYNYNNKYNYNNNNYNK 113
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 22.2 bits (45), Expect = 5.4
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 40 IINMSTYANNEYIIATNNSINENRYNAEK 126
I N + Y NN Y N + N N YN K
Sbjct: 90 IHNNNNYNNNNY---NNYNYNNNNYNNYK 115
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 7.2
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +1
Query: 337 TLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATP 465
TL S H + A P ++ +S+S + QR+ TP
Sbjct: 1735 TLLHSFMYHEHAMTEGCASPPPAATSMKSVSSRRRQQRKQQTP 1777
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 7.2
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +1
Query: 337 TLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATP 465
TL S H + A P ++ +S+S + QR+ TP
Sbjct: 1731 TLLHSFMYHEHAMTEGCASPPPAATSMKSVSSRRRQQRKQQTP 1773
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 64 NNEYIIATNNSINENRYNAEKMKN 135
+N YI +N N+N YN + N
Sbjct: 86 SNNYISNISNYNNDNNYNKKLYYN 109
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 21.4 bits (43), Expect = 9.5
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -1
Query: 380 VHGDVECVLVDRHK 339
V+G + CV+ RH+
Sbjct: 217 VYGRISCVIASRHR 230
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 21.4 bits (43), Expect = 9.5
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 756 LSYT*HKLYNTIMFYHNLLFINI*SF 679
LS+ LY + M HNL ++N F
Sbjct: 255 LSHKTQNLYYSAMSSHNLNYVNTKQF 280
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,200
Number of Sequences: 438
Number of extensions: 4389
Number of successful extensions: 27
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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