Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30897
(812 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4C5.04 |rad31|uba4|SUMO E1-like activator enzyme Rad31|Schiz... 62 7e-11
SPBC1604.21c |ptr3|uba1, SPBC211.09|ubiquitin activating enzyme ... 49 7e-07
SPAC323.06c |uba5||NEDD8 activating enzyme |Schizosaccharomyces ... 44 3e-05
SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme Fub2|Schiz... 39 0.001
SPAC2G11.10c |||URM1 activating enzyme |Schizosaccharomyces pomb... 37 0.003
SPAC24H6.12c |uba3||NEDD8 activating enzyme|Schizosaccharomyces ... 32 0.084
SPAC1A6.10 ||SPAC30D11.15c|Moeb/ThiF domain|Schizosaccharomyces ... 32 0.11
SPBC16E9.15 |||heat shock factor binding protein |Schizosaccharo... 27 2.4
SPBC6B1.05c |||ubiquitin-like conjugating enzyme|Schizosaccharom... 27 3.2
SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyce... 26 5.5
SPAPB17E12.04c |csn2||COP9/signalosome complex subunit Csn2 |Sch... 26 7.3
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 26 7.3
SPAC22F3.03c |rdh54|tid1, mug34|ATP-dependent DNA helicase Rdh54... 26 7.3
SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex ... 26 7.3
SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomy... 25 9.7
SPAC23C11.01 |||ER membrane protein, ICE2 family|Schizosaccharom... 25 9.7
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 25 9.7
>SPAC4C5.04 |rad31|uba4|SUMO E1-like activator enzyme
Rad31|Schizosaccharomyces pombe|chr 1|||Manual
Length = 307
Score = 62.5 bits (145), Expect = 7e-11
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 4/175 (2%)
Frame = +1
Query: 82 VGNNEVELSEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGV-KV 258
+GN+ + E YDRQIRLWG ++Q+ L+ ++VL+I S L EIAKN++L+G+ K+
Sbjct: 1 MGNHNINAEEIAL--YDRQIRLWGFNAQQALKQSRVLLITASPLANEIAKNLVLSGIGKL 58
Query: 259 CVC*TMRN*NKSICTPNFCVLLTRSA*IERRV---RWKELEA*IRWSMSQVILRA*MSYL 429
CV +M K + F + + + V + EL + ++
Sbjct: 59 CVLDSMTVYEKDV-EEQFFIEASDIGQLRANVFKKKLHELNPLVEIDTDTSLISEIDEGK 117
Query: 430 TASSRNLTSYVQQVSNKSNSNESTMLARQNKKFICGDVWGTYGYMFSDLVDHEYS 594
+ + + NE T + N F +G YG+ F DL++H ++
Sbjct: 118 ISKFSMVIATQLDYEEFCRINELTRIC--NASFYATSCFGLYGFAFCDLINHNFA 170
Score = 51.2 bits (117), Expect = 2e-07
Identities = 26/81 (32%), Positives = 45/81 (55%)
Frame = +3
Query: 258 VCLLDNEKLKQIDLYSQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGVDELPDSF 437
+C+LD+ + + D+ QF IG RA ++ LNP+V++ + T + E+ +
Sbjct: 58 LCVLDSMTVYEKDVEEQFFIEASDIGQLRANVFKKKLHELNPLVEIDTDTSLISEIDEGK 117
Query: 438 FTEFDVVCATGLKQEQFERIN 500
++F +V AT L E+F RIN
Sbjct: 118 ISKFSMVIATQLDYEEFCRIN 138
>SPBC1604.21c |ptr3|uba1, SPBC211.09|ubiquitin activating enzyme
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1012
Score = 49.2 bits (112), Expect = 7e-07
Identities = 23/43 (53%), Positives = 30/43 (69%)
Frame = +1
Query: 127 YDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVK 255
Y RQ+ + G ++ K++ + VLIIG GLG EIAKNV L GVK
Sbjct: 20 YSRQLYVLGHEAMKQMSQSNVLIIGCKGLGVEIAKNVCLAGVK 62
Score = 37.9 bits (84), Expect = 0.002
Identities = 26/72 (36%), Positives = 35/72 (48%)
Frame = +3
Query: 252 KSVCLLDNEKLKQIDLYSQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGVDELPD 431
KSV L D + + DL SQ+ D IGV RA+ ++ + LN V V+ VDEL
Sbjct: 62 KSVTLYDPQPTRIEDLSSQYFLTEDDIGVPRAKVTVSKLAELNQYVPVSV----VDELST 117
Query: 432 SFFTEFDVVCAT 467
+ F V T
Sbjct: 118 EYLKNFKCVVVT 129
>SPAC323.06c |uba5||NEDD8 activating enzyme |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 500
Score = 43.6 bits (98), Expect = 3e-05
Identities = 17/49 (34%), Positives = 31/49 (63%)
Frame = +1
Query: 106 SEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGV 252
+ A+ ++YDRQ+RLW + Q + + V ++ + +G E KN+IL G+
Sbjct: 3 TSAKMQKYDRQVRLWKAEGQNAIEKSHVCLLYANTVGCEALKNLILPGI 51
>SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme
Fub2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 38.7 bits (86), Expect = 0.001
Identities = 13/34 (38%), Positives = 27/34 (79%)
Frame = +1
Query: 154 LDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVK 255
+++ + ++AKVL++G G+G E+ KN++++GVK
Sbjct: 17 VEALRNFKSAKVLLVGAGGIGCELLKNLLMSGVK 50
Score = 25.4 bits (53), Expect = 9.7
Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Frame = +3
Query: 252 KSVCLLDNEKLKQIDLYSQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGV--DEL 425
K V ++D + + +L QFL + +A + + A NP V + ++ + D
Sbjct: 50 KEVHIIDLDTIDLSNLNRQFLFRKKHVKQPKAIVAAKTASSFNPNVKLEAYHANIKEDRF 109
Query: 426 PDSFFTEFDVVCATGLKQEQFERINNAC 509
++F +FD+V + +N C
Sbjct: 110 NVAWFRQFDLVFNALDNLDARRHVNKQC 137
>SPAC2G11.10c |||URM1 activating enzyme |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 401
Score = 37.1 bits (82), Expect = 0.003
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +1
Query: 88 NNEVELSEAEAEQYDRQIRLW--GLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGV 252
+N +ELS E +Y RQ+ L GL Q L+ + VL+IG GLG + ++ G+
Sbjct: 11 SNGLELSLDEYSRYGRQMLLSEIGLPGQLSLKRSSVLVIGAGGLGCPAMQYLVAAGI 67
>SPAC24H6.12c |uba3||NEDD8 activating enzyme|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 444
Score = 32.3 bits (70), Expect = 0.084
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 157 DSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVK 255
++ K ++K+LIIG GLG EI K++ L+G +
Sbjct: 37 ETLKSAFSSKILIIGAGGLGCEILKDLALSGFR 69
>SPAC1A6.10 ||SPAC30D11.15c|Moeb/ThiF domain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 485
Score = 31.9 bits (69), Expect = 0.11
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +1
Query: 121 EQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVK 255
EQ R +G D +RLR + V+++G G+G+ + + +GV+
Sbjct: 107 EQLARNYAFFGEDGMERLRNSFVIVVGCGGVGSWVINMLARSGVQ 151
>SPBC16E9.15 |||heat shock factor binding protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 75
Score = 27.5 bits (58), Expect = 2.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 783 SKIATITRRSLERISGEFQSADKAF 709
S I T+T + LE ISG+F++ K F
Sbjct: 16 SAITTLTDKLLEDISGDFETLQKQF 40
>SPBC6B1.05c |||ubiquitin-like conjugating
enzyme|Schizosaccharomyces pombe|chr 2|||Manual
Length = 649
Score = 27.1 bits (57), Expect = 3.2
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +1
Query: 103 LSEAEAEQYDRQIRLWGLDSQ---KRLRAAKVLIIGLSGLGAEIAKNVILTGVK 255
LSE+ A + + W L Q R++ +K L++G LG +A+N++ GV+
Sbjct: 308 LSES-ASTLNLSLMRWRLVPQLDLDRIQNSKCLLLGAGTLGCGVARNLLSWGVR 360
>SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 715
Score = 26.2 bits (55), Expect = 5.5
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 228 KKRNPHRCKSVCLLDNEKLKQIDLYSQFLCPPDKIGVN 341
K+ NP +SV +L N++ K+ + Q P D G N
Sbjct: 253 KQFNPETNESVGILQNQESKRNEQIKQQYMPADNFGSN 290
>SPAPB17E12.04c |csn2||COP9/signalosome complex subunit Csn2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 437
Score = 25.8 bits (54), Expect = 7.3
Identities = 16/73 (21%), Positives = 38/73 (52%)
Frame = +1
Query: 391 MSQVILRA*MSYLTASSRNLTSYVQQVSNKSNSNESTMLARQNKKFICGDVWGTYGYMFS 570
M +V++ LT + + Y+ + ++ S+E+ +A QN+ +++ M+S
Sbjct: 149 MLKVLMHVARFLLTQKNYHKFKYLLRQMHELLSDENNSVADQNRGTHLLELYSLEIQMYS 208
Query: 571 DLVDHEYSEEIVQ 609
D+ D++ +E+ Q
Sbjct: 209 DIEDNKRLKELYQ 221
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 25.8 bits (54), Expect = 7.3
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +1
Query: 568 SDLVDHEYSEEIVQHKATKRGPDDEEKNARETVFYNSKTSSYIC 699
S +D+E+S + +Q + T P+ + + + +YN S +C
Sbjct: 23 SSPIDYEHSLKSLQDERTLNYPNKQFNSENPSSYYNMDDSGELC 66
>SPAC22F3.03c |rdh54|tid1, mug34|ATP-dependent DNA helicase
Rdh54|Schizosaccharomyces pombe|chr 1|||Manual
Length = 811
Score = 25.8 bits (54), Expect = 7.3
Identities = 15/67 (22%), Positives = 27/67 (40%)
Frame = -1
Query: 554 YVPQTSPQINFLFCRASIVDSFELLLFETCCTYDVKFREEAVR*LIYALSMTCDIDHRIQ 375
++ + Q F I F ETC TY++ F + + L IDH I
Sbjct: 681 FIDSDASQKKNFFTGEDIKTLFSYSKTETCLTYELAFDSDEIDSLTKKKDPLTKIDHTID 740
Query: 374 ASSSFQR 354
+ ++ ++
Sbjct: 741 SPNTKEK 747
>SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex
subunit Apc3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 25.8 bits (54), Expect = 7.3
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 484 NSNESTMLARQNKKFICGDVWGTYGYMFSDLVDHEYSEEIVQ 609
N +S + +QN F+ + G + +LVD+E SEE+ Q
Sbjct: 350 NCFQSLPIEQQNTPFVLAKL----GITYFELVDYEKSEEVFQ 387
>SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1019
Score = 25.4 bits (53), Expect = 9.7
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 484 NSNESTMLARQNKKFICGDVWGTYGYMF--SDLVDHEYSEEIVQHKATKRGPDDEEKNAR 657
N N +T++ N+ I G +G++ SD + EE+ +++A+ P DEE+
Sbjct: 906 NLNWTTIMKTVNEDPIAFFEEGGWGFLGAPSDDEGDDSVEEVSEYEASDADPSDEEEEES 965
Query: 658 E 660
E
Sbjct: 966 E 966
>SPAC23C11.01 |||ER membrane protein, ICE2
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 25.4 bits (53), Expect = 9.7
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -2
Query: 97 LHYFQPFFAMLLFIISIN 44
LH+F+P +L II++N
Sbjct: 116 LHFFEPLLVFILLIIALN 133
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 25.4 bits (53), Expect = 9.7
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +3
Query: 324 DKIGVNRAEGSLERARG-LNPMVDVTSHTKGVDELPDSFFTEFDVVCATGLKQEQFERIN 500
+KI +LER + LN +V TKG+D+L E + K+E RI
Sbjct: 266 EKIREREVMITLERVKKILNAGANVILTTKGIDDLCLKSIIEAGAMAVRRCKKEDLRRIA 325
Query: 501 NA 506
A
Sbjct: 326 KA 327
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,292,602
Number of Sequences: 5004
Number of extensions: 66588
Number of successful extensions: 220
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 220
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 396433620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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