Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30897
(812 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_04_0388 + 17076157-17076254,17076762-17076813,17077672-170778... 66 4e-11
03_02_0665 - 10268959-10269148,10269344-10269936,10270572-102710... 59 4e-09
12_01_0038 - 312152-312748,312930-313362,313572-314440,314535-31... 57 2e-08
11_01_0039 - 290960-291086,291615-291714,291809-292013,292466-29... 57 2e-08
06_01_1006 + 7836366-7836460,7836568-7836626,7836877-7836961,783... 44 1e-04
07_03_1774 + 29425486-29425831,29426018-29426235,29426337-294271... 43 3e-04
03_06_0476 + 34199577-34199638,34200267-34200397,34200535-342006... 41 0.001
02_05_1131 - 34328168-34328557,34328838-34328957,34329067-343291... 33 0.20
07_03_1076 + 23779941-23779988,23780102-23780191,23781580-237816... 33 0.27
02_05_1044 + 33728623-33728768,33728814-33728993,33729446-337295... 30 2.5
02_01_0137 + 988442-988641,989088-989281,989369-989488,989594-98... 30 2.5
03_06_0246 + 32622793-32622804,32622883-32623057,32623395-326236... 29 3.3
01_01_1178 + 9385261-9385374,9385457-9385620,9386251-9386453,938... 29 3.3
03_02_0939 + 12571052-12571173,12571219-12571309,12571413-125715... 29 4.4
07_01_1060 + 9330217-9330219,9330490-9330561,9330773-9330917,933... 29 5.8
03_04_0017 - 16468486-16468505,16468597-16468807,16469522-164702... 28 7.7
01_05_0658 - 24043655-24043945,24044003-24044257,24044359-240445... 28 7.7
>11_04_0388 +
17076157-17076254,17076762-17076813,17077672-17077867,
17078242-17078321,17078465-17078581,17078895-17078950,
17079238-17079268,17079292-17079342,17080411-17080477,
17080621-17080724,17080802-17080909,17081874-17081987
Length = 357
Score = 65.7 bits (153), Expect = 4e-11
Identities = 29/56 (51%), Positives = 38/56 (67%)
Frame = +1
Query: 85 GNNEVELSEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGV 252
G E EL+ E YDRQIR+WG+D+QKRL A VL+ G++G E KN++L GV
Sbjct: 5 GGAEEELTAQETALYDRQIRVWGVDAQKRLSKAHVLVCGMNGTTTEFCKNIVLAGV 60
Score = 39.1 bits (87), Expect = 0.004
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Frame = +3
Query: 255 SVCLLDNEKLKQIDLYSQFLCPPDKI---GVNRAEGSLERARGLNPMVDVTSHTKGVDEL 425
S+ L+D+ + + DL + FL P D+ G +RAE E + NPMV V KG L
Sbjct: 62 SLSLMDDHLVTEDDLNANFLIPHDESIYGGRSRAEVCCESLKDFNPMVRVAVE-KGDPSL 120
Query: 426 PD-SFFTEFDVVCATGLKQEQFERINNACATEQK 524
D F +FD++ + + IN+ C K
Sbjct: 121 IDGEFLDKFDIIVVSCAPIKTKLLINDNCRKRSK 154
>03_02_0665 -
10268959-10269148,10269344-10269936,10270572-10271004,
10271172-10272040,10272121-10272915,10273612-10273829,
10274931-10275230,10276834-10277161
Length = 1241
Score = 59.3 bits (137), Expect = 4e-09
Identities = 27/58 (46%), Positives = 42/58 (72%)
Frame = +1
Query: 82 VGNNEVELSEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVK 255
V N E++E + + + RQ+ ++G ++ +RL A+ VL+ GL+GLGAEIAKN+ L GVK
Sbjct: 162 VSGNGSEVAEIDEDLHSRQLAVYGRETMRRLFASNVLVSGLNGLGAEIAKNLALAGVK 219
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +1
Query: 124 QYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGV 252
+YD QI ++G QK++R A V ++G LG E KN+ L GV
Sbjct: 573 RYDAQISVFGSKLQKKMRDANVFVVGSGALGCEFLKNLALMGV 615
Score = 35.1 bits (77), Expect = 0.067
Identities = 23/90 (25%), Positives = 41/90 (45%)
Frame = +3
Query: 252 KSVCLLDNEKLKQIDLYSQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGVDELPD 431
KS+ L D ++ DL F D IG NRA + + LN V +++ T ++L +
Sbjct: 219 KSITLHDMGNVEMWDLSGNFFLSEDDIGKNRAVACTAKLQELNNAVLISTLT---EDLTN 275
Query: 432 SFFTEFDVVCATGLKQEQFERINNACATEQ 521
++F V T + ++ ++ C Q
Sbjct: 276 EHLSKFQAVVFTDISLDKAFEFDDYCRNHQ 305
>12_01_0038 -
312152-312748,312930-313362,313572-314440,314535-314584,
314589-315192,315674-315718,316100-316317,317020-317332,
318681-318716
Length = 1054
Score = 56.8 bits (131), Expect = 2e-08
Identities = 25/49 (51%), Positives = 38/49 (77%)
Frame = +1
Query: 109 EAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVK 255
E + + + RQ+ ++G ++ KRL A+ VL+ GL+GLGAEIAKN++L GVK
Sbjct: 78 EIDEDLHSRQLAVYGRETMKRLFASNVLVSGLNGLGAEIAKNLVLAGVK 126
Score = 44.4 bits (100), Expect = 1e-04
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +1
Query: 115 EAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGV 252
E +YD QI ++G + QK+L AK+ ++G LG E KN+ L G+
Sbjct: 445 ENTRYDAQISVFGSNLQKKLEQAKIFMVGSGALGCEFLKNLALMGI 490
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +3
Query: 252 KSVCLLDNEKLKQIDLYSQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHT 407
KSV L D++ ++ DL S F +G NRA+ +++ + LN V +++ T
Sbjct: 126 KSVTLHDDDNVELWDLSSNFFLTEKDVGQNRAQTCVQKLQELNNAVIISTIT 177
>11_01_0039 -
290960-291086,291615-291714,291809-292013,292466-292513,
295071-295646,295828-296260,296470-297338,297433-298227,
298709-298753,299135-299352,300055-300364,302715-302984
Length = 1331
Score = 56.8 bits (131), Expect = 2e-08
Identities = 25/49 (51%), Positives = 38/49 (77%)
Frame = +1
Query: 109 EAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVK 255
E + + + RQ+ ++G ++ KRL A+ VL+ GL+GLGAEIAKN++L GVK
Sbjct: 155 EIDEDLHSRQLAVYGRETMKRLFASNVLVSGLNGLGAEIAKNLVLAGVK 203
Score = 44.4 bits (100), Expect = 1e-04
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +1
Query: 115 EAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGV 252
E +YD QI ++G + QK+L AK+ ++G LG E KN+ L G+
Sbjct: 569 ENTRYDAQISVFGSNLQKKLEQAKIFMVGSGALGCEFLKNLALMGI 614
Score = 31.9 bits (69), Expect = 0.62
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +3
Query: 252 KSVCLLDNEKLKQIDLYSQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHT 407
KSV L D++ ++ DL S F +G NRA+ +++ + LN V +++ T
Sbjct: 203 KSVNLHDDDNVELWDLSSNFFLTEKDVGQNRAQTCVQKLQELNNAVIISTIT 254
>06_01_1006 +
7836366-7836460,7836568-7836626,7836877-7836961,
7837349-7837496,7837774-7837986,7838403-7838537,
7838659-7838790,7838884-7839099,7839212-7839336,
7839787-7839844,7839977-7840087
Length = 458
Score = 44.4 bits (100), Expect = 1e-04
Identities = 19/59 (32%), Positives = 39/59 (66%)
Frame = +1
Query: 76 KMVGNNEVELSEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGV 252
++V +++ E +EQ R I+ +G++SQK++ + V++IGL G+G+ A ++ +GV
Sbjct: 61 RVVATSDLLDDEVVSEQLTRNIQFFGMESQKKVTGSFVVVIGLGGVGSHAASMLLRSGV 119
>07_03_1774 +
29425486-29425831,29426018-29426235,29426337-29427131,
29427206-29428074,29428317-29428749,29429263-29429859
Length = 1085
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/48 (39%), Positives = 33/48 (68%)
Frame = +1
Query: 91 NEVELSEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKN 234
N V + E + + + RQ+ ++G ++ +RL A+ VL+ GL+GLGAEI +
Sbjct: 44 NGVVVPEIDEDLHSRQLAVYGRETMRRLFASHVLVSGLNGLGAEIGSS 91
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +1
Query: 124 QYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGV 252
+YD QI ++G QK+L A ++G LG E KN+ L GV
Sbjct: 479 RYDAQISVFGSKLQKKLEEANTFVVGSGALGCEFLKNLALMGV 521
Score = 35.1 bits (77), Expect = 0.067
Identities = 24/86 (27%), Positives = 42/86 (48%)
Frame = +3
Query: 252 KSVCLLDNEKLKQIDLYSQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGVDELPD 431
KSV L D + ++ DL + F + IG NRA + + + LN V V++ T +EL
Sbjct: 125 KSVTLHDVKNVEMWDLSANFFLSENDIGKNRAAACVSKLQELNNAVLVSALT---EELTT 181
Query: 432 SFFTEFDVVCATGLKQEQFERINNAC 509
++F V T + ++ ++ C
Sbjct: 182 DHLSKFQAVVFTDIGLDKAYEFDDYC 207
>03_06_0476 +
34199577-34199638,34200267-34200397,34200535-34200698,
34201007-34201117,34201308-34201387,34201489-34201639,
34201736-34201829,34202421-34202509,34203672-34203745,
34203859-34204021,34204445-34204530,34205011-34205094,
34205186-34205366,34205837-34205887
Length = 506
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +1
Query: 124 QYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGV 252
+YDRQ+R+WG Q L A + ++ G E KN++L GV
Sbjct: 15 KYDRQLRIWGDQGQAALEKASICLLTCGPTGTEAMKNLVLGGV 57
>02_05_1131 -
34328168-34328557,34328838-34328957,34329067-34329185,
34329659-34329767,34329847-34329885,34341125-34341203,
34341483-34341547,34341850-34341905,34342141-34342233,
34342312-34342579
Length = 445
Score = 33.5 bits (73), Expect = 0.20
Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +1
Query: 124 QYDRQIRL--WGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGV 252
+Y R + L +GL+ Q++L + +L++G GLG+ +A + GV
Sbjct: 76 RYRRHLLLPQFGLEGQRKLSQSSILVVGAGGLGSPVAMYLAACGV 120
>07_03_1076 +
23779941-23779988,23780102-23780191,23781580-23781663,
23781792-23782010,23782873-23782974,23783809-23784207,
23784332-23784561,23784749-23784842,23784931-23785113,
23785254-23785351,23785831-23786143
Length = 619
Score = 33.1 bits (72), Expect = 0.27
Identities = 12/31 (38%), Positives = 23/31 (74%)
Frame = +1
Query: 163 QKRLRAAKVLIIGLSGLGAEIAKNVILTGVK 255
++ ++AAKVL++G G+G E+ K + L+G +
Sbjct: 12 EEAVKAAKVLMVGAGGIGCELLKTLALSGFR 42
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Frame = +3
Query: 252 KSVCLLDNEKLKQIDLYSQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGVDELPD 431
+ + ++D + ++ +L QFL +G ++A + + P +++TS+ V +
Sbjct: 42 RDIHIIDLDTIEVSNLNRQFLFRQSHVGQSKAHVARDAVLKFRPNINITSYHANVKDAQF 101
Query: 432 S--FFTEFDVVCATGLKQEQFER-INNAC 509
+ FF +F+VV GL R +N C
Sbjct: 102 NVEFFKQFNVV-LNGLDNLDARRHVNRLC 129
>02_05_1044 +
33728623-33728768,33728814-33728993,33729446-33729523,
33729834-33729930,33730206-33730339,33730944-33731025,
33731631-33731717,33731875-33731981,33732674-33732845,
33733018-33733259,33733482-33733563,33733954-33734019,
33734040-33734159,33734935-33735012,33735083-33735178,
33735791-33735897,33736031-33736199,33736402-33736452,
33736567-33736650,33736946-33737040,33737175-33737265,
33737342-33737488,33737614-33737676
Length = 857
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +1
Query: 505 LARQNKKFICGDVWGTYGYMFSDLVDHEYSEEIVQHKAT 621
LA+++ +++ DV GTYG +FS +++ Y + I T
Sbjct: 186 LAKESGEYVPYDVNGTYGQLFS-IIEERYKDNIESRSLT 223
>02_01_0137 +
988442-988641,989088-989281,989369-989488,989594-989673,
990244-990510,990840-992458,992571-993327,993560-995506
Length = 1727
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +1
Query: 430 TASSRNLTSYVQQVSNKSNSNESTMLARQNKKFICGDVWGTYGYMFSDLVDHEYSEEI 603
+++S + SY+QQ+SN+ N N S ++ + +K + T+ M V H SE I
Sbjct: 306 SSASSSTPSYIQQISNRMNQNISWVMDGKKRKRE-EEEEPTHSVMLPPEVKHGISERI 362
>03_06_0246 +
32622793-32622804,32622883-32623057,32623395-32623659,
32624594-32624693,32625076-32625125,32625239-32625293,
32625742-32625774
Length = 229
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 352 PSARFTPILSGGHRNWEYRSIC 287
P +F I +GGH WE+RSIC
Sbjct: 182 PKPKF--IFNGGHELWEWRSIC 201
>01_01_1178 +
9385261-9385374,9385457-9385620,9386251-9386453,
9387130-9387362,9387584-9387640,9388120-9388241,
9388366-9388425,9388426-9388543,9389005-9389286
Length = 450
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 184 KVLIIGLSGLGAEIAKNVILTGVK 255
+VL++G GLG E+ K++ L+G K
Sbjct: 48 EVLVVGAGGLGCELLKDLALSGFK 71
>03_02_0939 +
12571052-12571173,12571219-12571309,12571413-12571512,
12571726-12571807,12571897-12571953,12572632-12572713,
12572792-12572884,12573984-12574047,12574161-12574246,
12574329-12574430,12574526-12574609,12574885-12574945,
12575010-12575091,12575173-12575250,12575867-12575931,
12576108-12576185,12576278-12576450
Length = 499
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +1
Query: 130 DRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKVCVC 267
D+Q++ W L+ K +R+ + G+ L +++LTG + VC
Sbjct: 247 DKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTIDILLTGGRDSVC 292
>07_01_1060 +
9330217-9330219,9330490-9330561,9330773-9330917,
9331006-9331133,9331689-9331803,9331881-9331984,
9332356-9332568,9332637-9332657
Length = 266
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 184 KVLIIGLSGLGAEIAKNVILTGVKVCVC*TMRN 282
+VLI+G +G EIAK + GVK+ T RN
Sbjct: 116 QVLILGFGAIGVEIAKRIRPFGVKILA--TKRN 146
>03_04_0017 -
16468486-16468505,16468597-16468807,16469522-16470214,
16470338-16470398,16470624-16470706
Length = 355
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +3
Query: 99 RTF*GRSRTVRPTNPPVGLRLAEETTCSQSINHRLVRTRR*NC 227
RT G+ RP+N P E + +HRL R RR C
Sbjct: 282 RTVLGKKIAARPSNSPASRTYFLEGNNAHGDDHRLCRRRRPRC 324
>01_05_0658 -
24043655-24043945,24044003-24044257,24044359-24044530,
24044617-24044844,24045688-24045821,24045908-24045991,
24046202-24046492,24046571-24046903,24047002-24047246,
24047476-24047742,24048305-24048465,24048556-24048872,
24048966-24049247,24049325-24049626,24049699-24049789,
24049881-24049934,24050028-24050104,24050192-24050367,
24051331-24051540,24051626-24052029
Length = 1457
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +1
Query: 46 LLKL*ITALQKMVGNNEVELSEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEI 225
L L +T L K G ++ +SE E ++ I LD + + I+G +G G+EI
Sbjct: 771 LFTLALTYL-KPDGKSQPSISEEELKEKQANINGNVLDVDTMASSNNLAIVGSTGTGSEI 829
Query: 226 AKN 234
A N
Sbjct: 830 ADN 832
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,847,664
Number of Sequences: 37544
Number of extensions: 416737
Number of successful extensions: 1172
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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