Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30895
(602 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P18077 Cluster: 60S ribosomal protein L35a; n=47; Eutel... 118 1e-25
UniRef50_Q86E43 Cluster: Clone ZZZ247 mRNA sequence; n=4; Eukary... 117 2e-25
UniRef50_Q9VNB9 Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-... 116 4e-25
UniRef50_Q8I7D7 Cluster: Putative 60S ribosomal protein L35a; n=... 112 7e-24
UniRef50_Q0PXZ5 Cluster: Putative ribosomal protein L35Ae; n=1; ... 105 8e-22
UniRef50_UPI0001552EFF Cluster: PREDICTED: similar to ribosomal ... 102 7e-21
UniRef50_P49180 Cluster: 60S ribosomal protein L35a; n=4; Eukary... 98 2e-19
UniRef50_Q8W1C9 Cluster: Ribosomal protein L35A; n=13; Eukaryota... 96 5e-19
UniRef50_Q5GAS3 Cluster: Rpl35A; n=1; Zea mays|Rep: Rpl35A - Zea... 93 3e-18
UniRef50_P41056 Cluster: 60S ribosomal protein L33-B; n=42; Euka... 81 2e-14
UniRef50_A4S1R2 Cluster: Ribosomal protein L35a, component of cy... 81 3e-14
UniRef50_Q5KFG9 Cluster: 60s ribosomal protein l33-b, putative; ... 79 8e-14
UniRef50_Q4QHL3 Cluster: Ribosomal protein l35a, putative; n=6; ... 77 3e-13
UniRef50_Q4WX73 Cluster: 60S ribosomal protein L35Ae; n=4; Peziz... 75 1e-12
UniRef50_A5K584 Cluster: 60S ribosomal protein L33-B, putative; ... 71 2e-11
UniRef50_A0CFU8 Cluster: Chromosome undetermined scaffold_177, w... 68 1e-10
UniRef50_Q55BN7 Cluster: Ribosomal protein L35a; n=1; Dictyostel... 65 1e-09
UniRef50_A2DSF3 Cluster: Ribosomal protein L35Ae, putative; n=4;... 62 1e-08
UniRef50_A6R3W0 Cluster: Putative uncharacterized protein; n=2; ... 59 7e-08
UniRef50_Q7QXX7 Cluster: GLP_479_47445_47074; n=1; Giardia lambl... 54 2e-06
UniRef50_UPI0000D9A2D5 Cluster: PREDICTED: similar to ribosomal ... 44 3e-06
UniRef50_Q9V1P2 Cluster: 50S ribosomal protein L35Ae; n=5; Therm... 43 0.006
UniRef50_Q8TYY6 Cluster: 50S ribosomal protein L35Ae; n=2; Archa... 42 0.011
UniRef50_A5BSA9 Cluster: Putative uncharacterized protein; n=1; ... 40 0.034
UniRef50_Q8SSF3 Cluster: 60S RIBOSOMAL PROTEIN L35A; n=1; Enceph... 39 0.079
UniRef50_UPI0000DA3A09 Cluster: PREDICTED: similar to ribosomal ... 38 0.14
UniRef50_A2BL64 Cluster: 50S ribosomal protein L35Ae; n=2; Desul... 37 0.42
UniRef50_A1RX00 Cluster: Ribosomal protein L35Ae; n=1; Thermofil... 35 1.3
UniRef50_Q5PLF5 Cluster: Cytosine permease; n=24; Gammaproteobac... 34 3.0
UniRef50_Q0VN96 Cluster: Putative uncharacterized protein; n=1; ... 33 6.9
>UniRef50_P18077 Cluster: 60S ribosomal protein L35a; n=47;
Euteleostomi|Rep: 60S ribosomal protein L35a - Homo
sapiens (Human)
Length = 110
Score = 118 bits (283), Expect = 1e-25
Identities = 55/85 (64%), Positives = 63/85 (74%)
Frame = +2
Query: 254 LRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKV 433
LRNQ E+TALLK+EG R++ FY GK C YVY+AK T PGG K K R IWGKV
Sbjct: 18 LRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGG---KPNKTRVIWGKV 74
Query: 434 TRPHGNSGSVRAKFKSNLPAQAMGH 508
TR HGNSG VRAKF+SNLPA+A+GH
Sbjct: 75 TRAHGNSGMVRAKFRSNLPAKAIGH 99
>UniRef50_Q86E43 Cluster: Clone ZZZ247 mRNA sequence; n=4;
Eukaryota|Rep: Clone ZZZ247 mRNA sequence - Schistosoma
japonicum (Blood fluke)
Length = 128
Score = 117 bits (282), Expect = 2e-25
Identities = 59/106 (55%), Positives = 70/106 (66%)
Frame = +2
Query: 188 QSIKAPPRQAVRKGRIHRI*AWLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKK 367
Q +K P R V K LRNQHE+TALL+++G +R FY GK CVYVYRA+K
Sbjct: 14 QRLKRPGRLYV-KATFTGYRRGLRNQHESTALLRIDGVTERKSTEFYLGKRCVYVYRAEK 72
Query: 368 RTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMG 505
+ P R K TK+R IWGK+ RPHGNSG VRA+FK NLPA AMG
Sbjct: 73 KKVFPR--RQKPTKIRVIWGKIMRPHGNSGIVRARFKHNLPASAMG 116
>UniRef50_Q9VNB9 Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-PA
- Drosophila melanogaster (Fruit fly)
Length = 157
Score = 116 bits (279), Expect = 4e-25
Identities = 50/85 (58%), Positives = 65/85 (76%)
Frame = +2
Query: 254 LRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKV 433
LRNQHEN A+LK+EGA+ + FY GK CVYVY+A+ + +P P +KT++RA+WGKV
Sbjct: 63 LRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVPQHPE-RKTRVRAVWGKV 121
Query: 434 TRPHGNSGSVRAKFKSNLPAQAMGH 508
TR HGN+G+VRA+F NLP AMGH
Sbjct: 122 TRIHGNTGAVRARFNRNLPGHAMGH 146
Score = 39.5 bits (88), Expect = 0.060
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 204 RHGRLYAKAVFTGYKRG 254
RHGRL+AKAVFTGYKRG
Sbjct: 46 RHGRLFAKAVFTGYKRG 62
>UniRef50_Q8I7D7 Cluster: Putative 60S ribosomal protein L35a; n=1;
Ciona intestinalis|Rep: Putative 60S ribosomal protein
L35a - Ciona intestinalis (Transparent sea squirt)
Length = 122
Score = 112 bits (269), Expect = 7e-24
Identities = 51/83 (61%), Positives = 63/83 (75%)
Frame = +2
Query: 254 LRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKV 433
LRNQHE+TALL++EG ++ D FY GK C YVY+AK++T PRG+ K R IWGKV
Sbjct: 18 LRNQHEHTALLRIEGVTNKEDTDFYLGKKCAYVYKAKRKTKT---PRGEPNKTRVIWGKV 74
Query: 434 TRPHGNSGSVRAKFKSNLPAQAM 502
TR HGNSG VRA FK+NLPA+A+
Sbjct: 75 TRSHGNSGVVRATFKTNLPAKAI 97
>UniRef50_Q0PXZ5 Cluster: Putative ribosomal protein L35Ae; n=1;
Diaphorina citri|Rep: Putative ribosomal protein L35Ae -
Diaphorina citri (Asian citrus psyllid)
Length = 172
Score = 105 bits (252), Expect = 8e-22
Identities = 50/85 (58%), Positives = 61/85 (71%)
Frame = +2
Query: 257 RNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVT 436
RNQH NT+LL +E + DA FY GK CV++Y+AK + P R K++LRAIWGKVT
Sbjct: 80 RNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHSKR--KSRLRAIWGKVT 137
Query: 437 RPHGNSGSVRAKFKSNLPAQAMGHE 511
RPHG+SGSVRAKF NLPA MG +
Sbjct: 138 RPHGSSGSVRAKFHRNLPAIYMGRK 162
Score = 38.3 bits (85), Expect = 0.14
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +3
Query: 189 KASKPRHGRLYAKAVFTGYKRG 254
K + RHGRLYA+A+FTG+KRG
Sbjct: 57 KRLRLRHGRLYARAIFTGFKRG 78
>UniRef50_UPI0001552EFF Cluster: PREDICTED: similar to ribosomal
protein L35a; n=7; Euarchontoglires|Rep: PREDICTED:
similar to ribosomal protein L35a - Mus musculus
Length = 86
Score = 102 bits (244), Expect = 7e-21
Identities = 48/77 (62%), Positives = 55/77 (71%)
Frame = +2
Query: 278 ALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSG 457
ALLK+EG R++ FY GK C YVY+AK T PGG K K R IWGKVTR HGNS
Sbjct: 2 ALLKIEGVYARDETEFYLGKRCAYVYKAKNNTMTPGG---KLNKTRMIWGKVTRAHGNSS 58
Query: 458 SVRAKFKSNLPAQAMGH 508
VRAKF+SNLPA+A+GH
Sbjct: 59 MVRAKFRSNLPAKAIGH 75
>UniRef50_P49180 Cluster: 60S ribosomal protein L35a; n=4;
Eukaryota|Rep: 60S ribosomal protein L35a -
Caenorhabditis elegans
Length = 124
Score = 97.9 bits (233), Expect = 2e-19
Identities = 46/84 (54%), Positives = 60/84 (71%)
Frame = +2
Query: 254 LRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKV 433
LR Q E+T+LLK+EG ++ DA FYAGK VY+Y+A +T G T+ RAIWGK+
Sbjct: 31 LRTQSEHTSLLKLEGVFNKEDAGFYAGKRVVYLYKAHNKTLKTG--HTVATRTRAIWGKI 88
Query: 434 TRPHGNSGSVRAKFKSNLPAQAMG 505
TRPHGN+G+VRAKF N+P A+G
Sbjct: 89 TRPHGNAGAVRAKFHHNIPPSALG 112
Score = 40.3 bits (90), Expect = 0.034
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +3
Query: 180 VLRKASKPRHGRLYAKAVFTGYKRGYATST 269
V R+ S P GRLY KA+FTG+KRG T +
Sbjct: 6 VARRPSAPTTGRLYVKAIFTGFKRGLRTQS 35
>UniRef50_Q8W1C9 Cluster: Ribosomal protein L35A; n=13;
Eukaryota|Rep: Ribosomal protein L35A - Zea mays (Maize)
Length = 112
Score = 96.3 bits (229), Expect = 5e-19
Identities = 43/84 (51%), Positives = 59/84 (70%)
Frame = +2
Query: 260 NQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTR 439
NQ+E T+L+++EG + D +YAGK Y+Y+AK ++ +T+ R IWGKVTR
Sbjct: 27 NQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKAKTKS--------SETRYRCIWGKVTR 78
Query: 440 PHGNSGSVRAKFKSNLPAQAMGHE 511
PHGNSG VRAKFKSNLP ++MG +
Sbjct: 79 PHGNSGVVRAKFKSNLPPESMGRK 102
>UniRef50_Q5GAS3 Cluster: Rpl35A; n=1; Zea mays|Rep: Rpl35A - Zea
mays (Maize)
Length = 139
Score = 93.5 bits (222), Expect = 3e-18
Identities = 42/81 (51%), Positives = 57/81 (70%)
Frame = +2
Query: 260 NQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTR 439
NQ+E T+L+++EG + D +YAGK Y+Y+AK ++ +T+ R IWGKVTR
Sbjct: 47 NQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKAKTKS--------SETRYRCIWGKVTR 98
Query: 440 PHGNSGSVRAKFKSNLPAQAM 502
PHGNSG VRAKFKSNLP ++M
Sbjct: 99 PHGNSGVVRAKFKSNLPPESM 119
>UniRef50_P41056 Cluster: 60S ribosomal protein L33-B; n=42;
Eukaryota|Rep: 60S ribosomal protein L33-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 107
Score = 81.0 bits (191), Expect = 2e-14
Identities = 41/83 (49%), Positives = 52/83 (62%)
Frame = +2
Query: 257 RNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVT 436
R + N +L+K+EG +A FY GK YVYRA K RG +K+R +WGKVT
Sbjct: 21 RVNNPNVSLIKIEGVATPQEAQFYLGKRIAYVYRASKEV------RG--SKIRVMWGKVT 72
Query: 437 RPHGNSGSVRAKFKSNLPAQAMG 505
R HGNSG VRA F++NLPA+ G
Sbjct: 73 RTHGNSGVVRATFRNNLPAKTFG 95
>UniRef50_A4S1R2 Cluster: Ribosomal protein L35a, component of
cytosolic 80S ribosome and 60S large subunit; n=1;
Ostreococcus lucimarinus CCE9901|Rep: Ribosomal protein
L35a, component of cytosolic 80S ribosome and 60S large
subunit - Ostreococcus lucimarinus CCE9901
Length = 109
Score = 80.6 bits (190), Expect = 3e-14
Identities = 41/92 (44%), Positives = 55/92 (59%)
Frame = +2
Query: 260 NQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTR 439
NQ+ +T+L+K+EG D FY GK YVY+AK + + T R IWGKV R
Sbjct: 24 NQYNHTSLIKLEGVSDAPSTAFYGGKKLCYVYKAKTKK--------QGTAYRTIWGKVMR 75
Query: 440 PHGNSGSVRAKFKSNLPAQAMGHEYE*CCILP 535
HG SG VRAKFKS+LP+ ++G + C + P
Sbjct: 76 AHGTSGVVRAKFKSHLPSNSIGGKVR-CMLYP 106
>UniRef50_Q5KFG9 Cluster: 60s ribosomal protein l33-b, putative;
n=2; Filobasidiella neoformans|Rep: 60s ribosomal
protein l33-b, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 178
Score = 79.0 bits (186), Expect = 8e-14
Identities = 45/110 (40%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Frame = +2
Query: 185 SQSIKAPPRQAVR---KGRIHRI*AWLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVY 355
S S+K + A R KGRI RN N +LL++EG ++ A Y GK YVY
Sbjct: 65 SASLKRLDKMASRLYIKGRILGHKRGKRNSRPNQSLLQIEGVDNKEAAGHYLGKRVAYVY 124
Query: 356 RAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMG 505
+AK+ I G +++R IWG+++R HGNSG+V++KF++NLPA+ G
Sbjct: 125 KAKRE--ING------SRVRVIWGRISRSHGNSGAVKSKFRTNLPAKTFG 166
>UniRef50_Q4QHL3 Cluster: Ribosomal protein l35a, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein l35a, putative -
Leishmania major
Length = 144
Score = 77.0 bits (181), Expect = 3e-13
Identities = 43/106 (40%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Frame = +2
Query: 197 KAPPRQAVRKGRIHRI*AWLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKK--R 370
KAP + KG + L Q + TAL++VE R DA +Y GK YVY KK R
Sbjct: 29 KAP--RLYMKGTLAGYTRGLHGQTKQTALVRVENVNTREDATWYVGKRVCYVYHGKKVKR 86
Query: 371 TPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFK-SNLPAQAMG 505
+++ RA+WG+VTRPHGN+G +R KF +++PA A+G
Sbjct: 87 CVRWSKAPARRSTTRALWGRVTRPHGNAGMMRVKFNGASVPASAIG 132
>UniRef50_Q4WX73 Cluster: 60S ribosomal protein L35Ae; n=4;
Pezizomycotina|Rep: 60S ribosomal protein L35Ae -
Aspergillus fumigatus (Sartorya fumigata)
Length = 119
Score = 74.9 bits (176), Expect = 1e-12
Identities = 37/76 (48%), Positives = 49/76 (64%)
Frame = +2
Query: 278 ALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSG 457
+L+K++G A FY GK +VYRAK+ RG + +R IWGKVTRPHGNSG
Sbjct: 40 SLIKIDGVDSTEAANFYLGKKVAFVYRAKREV------RG--SNIRVIWGKVTRPHGNSG 91
Query: 458 SVRAKFKSNLPAQAMG 505
VRA+F+ NLP ++ G
Sbjct: 92 VVRAQFRHNLPPKSFG 107
>UniRef50_A5K584 Cluster: 60S ribosomal protein L33-B, putative;
n=5; Plasmodium|Rep: 60S ribosomal protein L33-B,
putative - Plasmodium vivax
Length = 146
Score = 70.9 bits (166), Expect = 2e-11
Identities = 34/83 (40%), Positives = 45/83 (54%)
Frame = +2
Query: 257 RNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVT 436
RNQ N L+ + + A FY GK YVYR K K++ IWGKV
Sbjct: 60 RNQDPNFTLISIRNVHTKKHAQFYVGKKIAYVYRTNKHHD--------GVKIKCIWGKVC 111
Query: 437 RPHGNSGSVRAKFKSNLPAQAMG 505
R HGNSG +RA+F++N+P +A G
Sbjct: 112 RTHGNSGVIRARFRTNIPPKAFG 134
>UniRef50_A0CFU8 Cluster: Chromosome undetermined scaffold_177,
whole genome shotgun sequence; n=9; Eukaryota|Rep:
Chromosome undetermined scaffold_177, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 129
Score = 68.1 bits (159), Expect = 1e-10
Identities = 34/81 (41%), Positives = 48/81 (59%)
Frame = +2
Query: 263 QHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRP 442
Q+EN ALLK+E D + FY GK Y+Y+A TK RAIWG++++
Sbjct: 45 QNENQALLKIEHVNDVASSRFYWGKRVAYIYKAHSLK--------NNTKFRAIWGRISKS 96
Query: 443 HGNSGSVRAKFKSNLPAQAMG 505
HG++G V A+F NLP +A+G
Sbjct: 97 HGSNGVVTARFGRNLPPRAIG 117
>UniRef50_Q55BN7 Cluster: Ribosomal protein L35a; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L35a -
Dictyostelium discoideum AX4
Length = 105
Score = 64.9 bits (151), Expect = 1e-09
Identities = 33/81 (40%), Positives = 45/81 (55%)
Frame = +2
Query: 263 QHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRP 442
Q+ N +L+K+EG R D+ FY GK V + K P G K WGK+ +
Sbjct: 20 QYPNISLIKIEGVVSREDSTFYLGKKVCLVSKVSKSAK---NPTGHKIS----WGKICKT 72
Query: 443 HGNSGSVRAKFKSNLPAQAMG 505
HG+SG V+A+F NLP +AMG
Sbjct: 73 HGSSGVVQARFARNLPPKAMG 93
>UniRef50_A2DSF3 Cluster: Ribosomal protein L35Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L35Ae,
putative - Trichomonas vaginalis G3
Length = 102
Score = 61.7 bits (143), Expect = 1e-08
Identities = 33/80 (41%), Positives = 46/80 (57%)
Frame = +2
Query: 272 NTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGN 451
N ALL+++G + +A FYAGK V++ K+ I WG +T+PHGN
Sbjct: 26 NQALLEIQGVVSKEEAQFYAGKKVASVWKFDKQEFIN-------------WGVITQPHGN 72
Query: 452 SGSVRAKFKSNLPAQAMGHE 511
SG VRAKF+ NLP Q +G +
Sbjct: 73 SGVVRAKFEKNLPPQMLGKQ 92
>UniRef50_A6R3W0 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Ajellomyces capsulatus NAm1
Length = 102
Score = 59.3 bits (137), Expect = 7e-08
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Frame = +2
Query: 257 RNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVT 436
R + NT+L+K+EG +D A FY GK +VYRAK+ + +K+R IWGKVT
Sbjct: 23 RATNPNTSLIKLEGVEDIKAANFYLGKKVAFVYRAKREV--------QGSKIRVIWGKVT 74
Query: 437 RPHGNSG----SVRAKFKSNLPA 493
R HG G +++ +F S P+
Sbjct: 75 RTHGQLGRCPCAIQTQFFSQSPS 97
>UniRef50_Q7QXX7 Cluster: GLP_479_47445_47074; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_479_47445_47074 - Giardia lamblia
ATCC 50803
Length = 123
Score = 54.4 bits (125), Expect = 2e-06
Identities = 33/83 (39%), Positives = 44/83 (53%)
Frame = +2
Query: 263 QHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRP 442
Q EN AL+KV G R + G+ + + +K PI +GK+ RP
Sbjct: 24 QRENVALVKVSGIYTRAETDKVLGR-LIAIIHSKSGKPI--------------FGKICRP 68
Query: 443 HGNSGSVRAKFKSNLPAQAMGHE 511
HGNSG VRA+F +NLP Q MGH+
Sbjct: 69 HGNSGMVRARFYTNLPGQLMGHK 91
>UniRef50_UPI0000D9A2D5 Cluster: PREDICTED: similar to ribosomal
protein L35a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein L35a - Macaca mulatta
Length = 80
Score = 44.4 bits (100), Expect(2) = 3e-06
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +2
Query: 437 RPHGNSGSVRAKFKSNLPAQAMGH 508
+ HGNSG VRAKF+SNLPA+A+GH
Sbjct: 46 KAHGNSGMVRAKFQSNLPAKAIGH 69
Score = 29.5 bits (63), Expect(2) = 3e-06
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 257 RNQHENTALLKVEGAKDRNDAVFYAGK 337
RNQ E+TALLK+E ++ FY K
Sbjct: 19 RNQREHTALLKIEAVYAGDETEFYLDK 45
>UniRef50_Q9V1P2 Cluster: 50S ribosomal protein L35Ae; n=5;
Thermococcaceae|Rep: 50S ribosomal protein L35Ae -
Pyrococcus abyssi
Length = 87
Score = 42.7 bits (96), Expect = 0.006
Identities = 28/86 (32%), Positives = 39/86 (45%)
Frame = +2
Query: 260 NQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTR 439
NQH N ++K R +A G+ ++ P GK K GK+ R
Sbjct: 16 NQHTNVMIIKPLNVNSREEASKLIGRLVIWK-----------SPSGKLLK-----GKIVR 59
Query: 440 PHGNSGSVRAKFKSNLPAQAMGHEYE 517
HG G+VRA+F+ LP QA+G E
Sbjct: 60 VHGTKGAVRARFEKGLPGQALGDYVE 85
>UniRef50_Q8TYY6 Cluster: 50S ribosomal protein L35Ae; n=2;
Archaea|Rep: 50S ribosomal protein L35Ae - Methanopyrus
kandleri
Length = 90
Score = 41.9 bits (94), Expect = 0.011
Identities = 29/98 (29%), Positives = 46/98 (46%)
Frame = +2
Query: 218 VRKGRIHRI*AWLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRG 397
V++G I Q +++ EG + R++A GK ++ + P G
Sbjct: 4 VKRGVIVNYRMGRHTQDPRQCIIEFEGVESRSEAAQLIGKEVIWKH------PETG---- 53
Query: 398 KKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHE 511
+ I GKV HGN+G+VR +F+ LP QA+G E
Sbjct: 54 -----KVIRGKVVDTHGNNGAVRVRFERGLPGQALGTE 86
>UniRef50_A5BSA9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 225
Score = 40.3 bits (90), Expect = 0.034
Identities = 28/85 (32%), Positives = 45/85 (52%)
Frame = -2
Query: 514 VFVSHSLGREVRLELGSDTARVAMWAGHLAPDSTQLGFFATGTSGNWCPLLSSVHIDAML 335
+F H LGR++ LELGSD V + +G LAP +T++ L V + L
Sbjct: 56 LFNYHGLGRQIGLELGSDNTTVTVRSGDLAPXATKVRSVLLH--------LGLVDVRHSL 107
Query: 334 ASIKDCIITVFCSFNLEESGVLVLV 260
A+I ++ +F+L++ GV +LV
Sbjct: 108 AAIPRHLLLGVHAFDLDQRGVGILV 132
>UniRef50_Q8SSF3 Cluster: 60S RIBOSOMAL PROTEIN L35A; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L35A
- Encephalitozoon cuniculi
Length = 113
Score = 39.1 bits (87), Expect = 0.079
Identities = 25/83 (30%), Positives = 37/83 (44%)
Frame = +2
Query: 257 RNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVT 436
R H LLK+ +++A Y G V + + P + G +T
Sbjct: 28 RRLHPRHVLLKIRNVTSKDEASSYVGNGVVCYKKNNEGERYP------------VHGVIT 75
Query: 437 RPHGNSGSVRAKFKSNLPAQAMG 505
R HGNSG+VRA+F NL + +G
Sbjct: 76 RIHGNSGAVRARFTRNLDPKLLG 98
>UniRef50_UPI0000DA3A09 Cluster: PREDICTED: similar to ribosomal
protein L35a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L35a - Rattus norvegicus
Length = 106
Score = 38.3 bits (85), Expect = 0.14
Identities = 23/63 (36%), Positives = 30/63 (47%)
Frame = +2
Query: 287 KVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVR 466
+ EG R++ + K C YVY+AK PG GK K R + GK P +G
Sbjct: 49 RAEGVYARDETELHLAKRCAYVYKAKISAVTPG---GKTNKTRVVRGKQLGP--RNGLFC 103
Query: 467 AKF 475
AKF
Sbjct: 104 AKF 106
>UniRef50_A2BL64 Cluster: 50S ribosomal protein L35Ae; n=2;
Desulfurococcales|Rep: 50S ribosomal protein L35Ae -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 106
Score = 36.7 bits (81), Expect = 0.42
Identities = 28/81 (34%), Positives = 36/81 (44%)
Frame = +2
Query: 263 QHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRP 442
Q+E L++V+G DR A G +Y GK + R GK+
Sbjct: 23 QYEKQVLIRVDGVNDRASASRLIGWKVLY-------------RDGKGNEYR---GKIVHV 66
Query: 443 HGNSGSVRAKFKSNLPAQAMG 505
HG+ G V A FK NLP QA G
Sbjct: 67 HGSKGVVIAVFKPNLPGQARG 87
>UniRef50_A1RX00 Cluster: Ribosomal protein L35Ae; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L35Ae - Thermofilum
pendens (strain Hrk 5)
Length = 85
Score = 35.1 bits (77), Expect = 1.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 425 GKVTRPHGNSGSVRAKFKSNLPAQAMG 505
GK+ R HG G V A FK +LP QA+G
Sbjct: 53 GKIVRMHGRRGHVLAYFKRHLPGQAVG 79
>UniRef50_Q5PLF5 Cluster: Cytosine permease; n=24;
Gammaproteobacteria|Rep: Cytosine permease - Salmonella
paratyphi-a
Length = 417
Score = 33.9 bits (74), Expect = 3.0
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Frame = -2
Query: 526 TASLVFVSHSLGREVRLELGSDTARVAMWAGHLAPDSTQLGFFATGTSGNWCPLLSSVHI 347
TA L ++ G L W L STQ+G+F G + P+ + I
Sbjct: 67 TAFLGYIGAKTGLSTHLLARYSFGVKGSWLPSLLLGSTQVGWFGVGVAMFAIPVSKATGI 126
Query: 346 DA-MLASIKDCIITVFCSFNLEESGVLVLVA*PRL 245
DA +L ++ ++T+ F + +L +VA P +
Sbjct: 127 DANILIAVSGLLMTLTIFFGISALTILSIVAVPAI 161
>UniRef50_Q0VN96 Cluster: Putative uncharacterized protein; n=1;
Alcanivorax borkumensis SK2|Rep: Putative
uncharacterized protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 204
Score = 32.7 bits (71), Expect = 6.9
Identities = 25/78 (32%), Positives = 36/78 (46%)
Frame = -2
Query: 490 REVRLELGSDTARVAMWAGHLAPDSTQLGFFATGTSGNWCPLLSSVHIDAMLASIKDCII 311
++VRL LG DT RV H AP +T+L F T + S+H A A +K +
Sbjct: 94 KQVRLALGEDTQRVRRVILHTAPANTELQTFLTDKVDG----MVSIHASA--ADVKRALA 147
Query: 310 TVFCSFNLEESGVLVLVA 257
V+ G + LV+
Sbjct: 148 PVYAPEPSHPIGDIFLVS 165
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 560,474,130
Number of Sequences: 1657284
Number of extensions: 11270268
Number of successful extensions: 30379
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30352
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42732687689
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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