Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30895
         (602 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071732-1|AAL49354.1|  157|Drosophila melanogaster RH44960p pro...   116   2e-26
AY071136-1|AAL48758.1|  157|Drosophila melanogaster RE17737p pro...   116   2e-26
AE014297-251|AAF52027.1|  157|Drosophila melanogaster CG2099-PA ...   116   2e-26
BT001299-1|AAN71054.1|  905|Drosophila melanogaster AT12234p pro...    28   8.5  
AE014297-4542|AAN14217.1|  905|Drosophila melanogaster CG31029-P...    28   8.5  

>AY071732-1|AAL49354.1|  157|Drosophila melanogaster RH44960p
           protein.
          Length = 157

 Score =  116 bits (279), Expect = 2e-26
 Identities = 50/85 (58%), Positives = 65/85 (76%)
 Frame = +2

Query: 254 LRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKV 433
           LRNQHEN A+LK+EGA+ +    FY GK CVYVY+A+ +  +P  P  +KT++RA+WGKV
Sbjct: 63  LRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVPQHPE-RKTRVRAVWGKV 121

Query: 434 TRPHGNSGSVRAKFKSNLPAQAMGH 508
           TR HGN+G+VRA+F  NLP  AMGH
Sbjct: 122 TRIHGNTGAVRARFNRNLPGHAMGH 146



 Score = 39.5 bits (88), Expect = 0.003
 Identities = 16/17 (94%), Positives = 17/17 (100%)
 Frame = +3

Query: 204 RHGRLYAKAVFTGYKRG 254
           RHGRL+AKAVFTGYKRG
Sbjct: 46  RHGRLFAKAVFTGYKRG 62


>AY071136-1|AAL48758.1|  157|Drosophila melanogaster RE17737p
           protein.
          Length = 157

 Score =  116 bits (279), Expect = 2e-26
 Identities = 50/85 (58%), Positives = 65/85 (76%)
 Frame = +2

Query: 254 LRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKV 433
           LRNQHEN A+LK+EGA+ +    FY GK CVYVY+A+ +  +P  P  +KT++RA+WGKV
Sbjct: 63  LRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVPQHPE-RKTRVRAVWGKV 121

Query: 434 TRPHGNSGSVRAKFKSNLPAQAMGH 508
           TR HGN+G+VRA+F  NLP  AMGH
Sbjct: 122 TRIHGNTGAVRARFNRNLPGHAMGH 146



 Score = 39.5 bits (88), Expect = 0.003
 Identities = 16/17 (94%), Positives = 17/17 (100%)
 Frame = +3

Query: 204 RHGRLYAKAVFTGYKRG 254
           RHGRL+AKAVFTGYKRG
Sbjct: 46  RHGRLFAKAVFTGYKRG 62


>AE014297-251|AAF52027.1|  157|Drosophila melanogaster CG2099-PA
           protein.
          Length = 157

 Score =  116 bits (279), Expect = 2e-26
 Identities = 50/85 (58%), Positives = 65/85 (76%)
 Frame = +2

Query: 254 LRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKV 433
           LRNQHEN A+LK+EGA+ +    FY GK CVYVY+A+ +  +P  P  +KT++RA+WGKV
Sbjct: 63  LRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVPQHPE-RKTRVRAVWGKV 121

Query: 434 TRPHGNSGSVRAKFKSNLPAQAMGH 508
           TR HGN+G+VRA+F  NLP  AMGH
Sbjct: 122 TRIHGNTGAVRARFNRNLPGHAMGH 146



 Score = 39.5 bits (88), Expect = 0.003
 Identities = 16/17 (94%), Positives = 17/17 (100%)
 Frame = +3

Query: 204 RHGRLYAKAVFTGYKRG 254
           RHGRL+AKAVFTGYKRG
Sbjct: 46  RHGRLFAKAVFTGYKRG 62


>BT001299-1|AAN71054.1|  905|Drosophila melanogaster AT12234p
           protein.
          Length = 905

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 309 RSFAPSTLRRAVFSCWLRNH 250
           + FAP T RR V SC+ R+H
Sbjct: 727 KGFAPCTCRRPVASCFCRSH 746


>AE014297-4542|AAN14217.1|  905|Drosophila melanogaster CG31029-PA
           protein.
          Length = 905

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 309 RSFAPSTLRRAVFSCWLRNH 250
           + FAP T RR V SC+ R+H
Sbjct: 727 KGFAPCTCRRPVASCFCRSH 746


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,320,511
Number of Sequences: 53049
Number of extensions: 531224
Number of successful extensions: 1404
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1401
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)