Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30892
(468 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g22300.2 68414.m02789 14-3-3 protein GF14 epsilon (GRF10) ide... 87 4e-18
At1g22300.1 68414.m02788 14-3-3 protein GF14 epsilon (GRF10) ide... 87 4e-18
At1g34760.1 68414.m04323 14-3-3 protein GF14 omicron (GRF11) ide... 80 6e-16
At1g26480.1 68414.m03229 14-3-3 protein GF14 iota (GRF12) identi... 79 1e-15
At5g38480.1 68418.m04651 14-3-3 protein GF14 psi (GRF3) (RCI1) i... 79 1e-15
At2g42590.1 68415.m05270 14-3-3 protein GF14 mu (GRF9) identical... 79 1e-15
At1g22300.3 68414.m02790 14-3-3 protein GF14 epsilon (GRF10) ide... 79 2e-15
At1g78300.1 68414.m09125 14-3-3 protein GF14 omega (GRF2) identi... 78 3e-15
At4g09000.1 68417.m01487 14-3-3-like protein GF14 chi / general... 78 3e-15
At1g35160.1 68414.m04360 14-3-3 protein GF14 phi (GRF4) identica... 78 3e-15
At5g65430.1 68418.m08228 14-3-3 protein GF14 kappa (GRF8) identi... 77 8e-15
At5g10450.1 68418.m01211 14-3-3 protein GF14 lambda (GRF6) (AFT1... 77 8e-15
At5g65430.2 68418.m08229 14-3-3 protein GF14 kappa (GRF8) identi... 75 2e-14
At5g16050.1 68418.m01876 14-3-3 protein GF14 upsilon (GRF5) iden... 75 3e-14
At3g02520.1 68416.m00240 14-3-3 protein GF14 nu (GRF7) identical... 73 1e-13
At2g10450.1 68415.m01098 14-3-3 protein, putative / grf15, putat... 56 2e-08
At1g78220.1 68414.m09115 14-3-3 protein GF14 pi (GRF13) similar ... 40 6e-04
At2g47090.1 68415.m05882 zinc finger (C2H2 type) family protein ... 28 2.7
At1g28230.1 68414.m03465 purine permease (PUP1) identical to pur... 28 3.6
>At1g22300.2 68414.m02789 14-3-3 protein GF14 epsilon (GRF10)
identical to 14-3-3 protein GF14 epsilon GI:5802798,
SP:P48347 from [Arabidopsis thaliana]
Length = 254
Score = 87.4 bits (207), Expect = 4e-18
Identities = 40/50 (80%), Positives = 44/50 (88%)
Frame = +2
Query: 2 AFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDEPAEGGD 151
AFDDAIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD +GDE +G D
Sbjct: 199 AFDDAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLNEEGDERTKGAD 248
>At1g22300.1 68414.m02788 14-3-3 protein GF14 epsilon (GRF10)
identical to 14-3-3 protein GF14 epsilon GI:5802798,
SP:P48347 from [Arabidopsis thaliana]
Length = 254
Score = 87.4 bits (207), Expect = 4e-18
Identities = 40/50 (80%), Positives = 44/50 (88%)
Frame = +2
Query: 2 AFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDEPAEGGD 151
AFDDAIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD +GDE +G D
Sbjct: 199 AFDDAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLNEEGDERTKGAD 248
>At1g34760.1 68414.m04323 14-3-3 protein GF14 omicron (GRF11)
identical to SP:Q9S9Z8, 14-3-3-like protein GF14 omicron
(General regulatory factor 11){Arabidopsis thaliana}
Length = 255
Score = 80.2 bits (189), Expect = 6e-16
Identities = 38/48 (79%), Positives = 44/48 (91%)
Frame = +2
Query: 2 AFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDEPAEG 145
AFD+AIAELD+LNEDSYKDSTLIMQLLRDNLTLWTSD + +G E ++G
Sbjct: 199 AFDEAIAELDSLNEDSYKDSTLIMQLLRDNLTLWTSDLE-EGGEQSKG 245
>At1g26480.1 68414.m03229 14-3-3 protein GF14 iota (GRF12) identical
to 14-3-3 protein GF14iota GI:12963453 from [Arabidopsis
thaliana]
Length = 268
Score = 79.4 bits (187), Expect = 1e-15
Identities = 37/44 (84%), Positives = 40/44 (90%)
Frame = +2
Query: 2 AFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDE 133
AFD+AIAELDTL+E+SYKDSTLIMQLLRDNLTLWTSD DG E
Sbjct: 204 AFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGE 247
>At5g38480.1 68418.m04651 14-3-3 protein GF14 psi (GRF3) (RCI1)
identical to 14-3-3 protein GF14 psi GI:1168200,
SP:P42644
Length = 255
Score = 79.0 bits (186), Expect = 1e-15
Identities = 40/48 (83%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Frame = +2
Query: 2 AFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD-TQGDGDEPAE 142
AFDDAIAELDTL E+SYKDSTLIMQLLRDNLTLWTSD T GDE E
Sbjct: 200 AFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMTDEAGDEIKE 247
>At2g42590.1 68415.m05270 14-3-3 protein GF14 mu (GRF9) identical to
GF14 mu GI:3551052, SP:Q96299 from [Arabidopsis
thaliana]
Length = 263
Score = 79.0 bits (186), Expect = 1e-15
Identities = 36/46 (78%), Positives = 41/46 (89%)
Frame = +2
Query: 2 AFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDEPA 139
AFD+AI+ELDTLNE+SYKDSTLIMQLLRDNLTLWTSD +G + A
Sbjct: 201 AFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDISEEGGDDA 246
>At1g22300.3 68414.m02790 14-3-3 protein GF14 epsilon (GRF10)
identical to 14-3-3 protein GF14 epsilon GI:5802798,
SP:P48347 from [Arabidopsis thaliana]
Length = 251
Score = 78.6 bits (185), Expect = 2e-15
Identities = 36/42 (85%), Positives = 39/42 (92%)
Frame = +2
Query: 2 AFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDG 127
AFDDAIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD +G
Sbjct: 199 AFDDAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLNEEG 240
>At1g78300.1 68414.m09125 14-3-3 protein GF14 omega (GRF2) identical
to GF14omega isoform GI:487791 from [Arabidopsis
thaliana]
Length = 259
Score = 78.2 bits (184), Expect = 3e-15
Identities = 39/48 (81%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Frame = +2
Query: 2 AFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGD-GDEPAE 142
AFD+AIAELDTL E+SYKDSTLIMQLLRDNLTLWTSD Q D DE E
Sbjct: 201 AFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDAADEIKE 248
>At4g09000.1 68417.m01487 14-3-3-like protein GF14 chi / general
regulatory factor 1 (GRF1) identical to 14-3-3 protein
GF14 chi chain GI:1702986, SP:P42643 from [Arabidopsis
thaliana]
Length = 267
Score = 77.8 bits (183), Expect = 3e-15
Identities = 36/41 (87%), Positives = 38/41 (92%)
Frame = +2
Query: 2 AFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGD 124
AFD+AIAELDTL E+SYKDSTLIMQLLRDNLTLWTSD Q D
Sbjct: 206 AFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDD 246
>At1g35160.1 68414.m04360 14-3-3 protein GF14 phi (GRF4) identical
to GF14 protein phi chain GI:1493805, SP:P46077 from
[Arabidopsis thaliana]
Length = 267
Score = 77.8 bits (183), Expect = 3e-15
Identities = 36/44 (81%), Positives = 39/44 (88%)
Frame = +2
Query: 2 AFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDE 133
AFD+AIAELDTL E+SYKDSTLIMQLLRDNLTLWTSD Q + E
Sbjct: 207 AFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDESPE 250
>At5g65430.1 68418.m08228 14-3-3 protein GF14 kappa (GRF8) identical
to 14-3-3 protein GF14 kappa GI:5802794, SP:P48348 from
[Arabidopsis thaliana]
Length = 248
Score = 76.6 bits (180), Expect = 8e-15
Identities = 36/44 (81%), Positives = 39/44 (88%)
Frame = +2
Query: 2 AFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDE 133
AF++AIAELDTL E+SYKDSTLIMQLLRDNLTLWTSD Q DE
Sbjct: 204 AFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQMDE 247
>At5g10450.1 68418.m01211 14-3-3 protein GF14 lambda (GRF6) (AFT1)
identical to 14-3-3 GF14lambda GI:1345595 from
[Arabidopsis thaliana]
Length = 248
Score = 76.6 bits (180), Expect = 8e-15
Identities = 36/44 (81%), Positives = 39/44 (88%)
Frame = +2
Query: 2 AFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDE 133
AF++AIAELDTL E+SYKDSTLIMQLLRDNLTLWTSD Q DE
Sbjct: 204 AFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQMDE 247
>At5g65430.2 68418.m08229 14-3-3 protein GF14 kappa (GRF8) identical
to 14-3-3 protein GF14 kappa GI:5802794, SP:P48348 from
[Arabidopsis thaliana]
Length = 246
Score = 75.4 bits (177), Expect = 2e-14
Identities = 35/41 (85%), Positives = 38/41 (92%)
Frame = +2
Query: 2 AFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGD 124
AF++AIAELDTL E+SYKDSTLIMQLLRDNLTLWTSD Q D
Sbjct: 204 AFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQMD 244
>At5g16050.1 68418.m01876 14-3-3 protein GF14 upsilon (GRF5)
identical to 14-3-3 protein GF14 upsilon GI:2232148 from
[Arabidopsis thaliana]
Length = 268
Score = 74.5 bits (175), Expect = 3e-14
Identities = 36/48 (75%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Frame = +2
Query: 2 AFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGD-GDEPAE 142
AFD+AI+ELDTL E+SYKDSTLIMQLLRDNLTLWTSD + GD+ E
Sbjct: 203 AFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDLNDEAGDDIKE 250
>At3g02520.1 68416.m00240 14-3-3 protein GF14 nu (GRF7) identical to
14-3-3 protein GF14 nu GI:1531631 from [Arabidopsis
thaliana]
Length = 265
Score = 72.9 bits (171), Expect = 1e-13
Identities = 36/49 (73%), Positives = 40/49 (81%), Gaps = 2/49 (4%)
Frame = +2
Query: 2 AFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD--TQGDGDEPAE 142
AFD+AI+ELDTL E+SYKDSTLIMQLLRDNLTLW SD + GDE E
Sbjct: 201 AFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWNSDINDEAGGDEIKE 249
>At2g10450.1 68415.m01098 14-3-3 protein, putative / grf15, putative
contains similarity to GF14 psi chain GI:166717,
SP:P42644 from [Arabidopsis thaliana]
Length = 82
Score = 55.6 bits (128), Expect = 2e-08
Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = +2
Query: 11 DAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD-TQGDGDEPAE 142
+A+ LD L ++ YKDSTLIM++LRDNLT WTSD T GDE E
Sbjct: 16 EALMMLDALGDELYKDSTLIMKILRDNLTFWTSDMTDEAGDEIKE 60
>At1g78220.1 68414.m09115 14-3-3 protein GF14 pi (GRF13) similar to
GF14 epsilon isoform GI:1022778 from [Arabidopsis
thaliana]; contains Pfam profile: PF00244 14-3-3
proteins
Length = 245
Score = 40.3 bits (90), Expect = 6e-04
Identities = 19/43 (44%), Positives = 32/43 (74%)
Frame = +2
Query: 2 AFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGD 130
A+D+AI ELD L+++ ++S I+++L+ NL+ WTS GDG+
Sbjct: 200 AYDEAITELDGLDKNICEESMYIIEMLKYNLSTWTS---GDGN 239
>At2g47090.1 68415.m05882 zinc finger (C2H2 type) family protein
contains Prosite PS00028: Zinc finger, C2H2 type, domain
Length = 745
Score = 28.3 bits (60), Expect = 2.7
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = -3
Query: 265 VGFGMIPRQTTFSNVT---RFLINTDENKCVCWGECGEILVVAALG 137
VG+G + S RF++N D C+C EC + V ALG
Sbjct: 15 VGYGSCGHREVCSTCVVRLRFILN-DRRCCICKTECPVVFVTKALG 59
>At1g28230.1 68414.m03465 purine permease (PUP1) identical to purine
permease GI:7620007 from [Arabidopsis thaliana]
Length = 356
Score = 27.9 bits (59), Expect = 3.6
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 291 KSRSQRTFPFRLKLNVVSSLTVLYFCI 371
K+R + TFP L++ +V L +FC+
Sbjct: 200 KARQEITFPLVLEIQMVMCLAATFFCV 226
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,890,392
Number of Sequences: 28952
Number of extensions: 140586
Number of successful extensions: 474
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 474
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 791932800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -