Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30890X
(369 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U52191-1|AAC50806.1| 1539|Homo sapiens SMCY protein. 29 3.5
L25270-1|AAA61302.1| 1560|Homo sapiens XE169 protein. 29 3.5
EF613277-1|ABR13544.1| 1440|Homo sapiens JARID1C protein protein. 29 3.5
D87072-1|BAA13241.2| 1512|Homo sapiens KIAA0234 protein. 29 3.5
BC146767-1|AAI46768.1| 1482|Homo sapiens JARID1D protein protein. 29 3.5
BC132721-1|AAI32722.1| 1539|Homo sapiens jumonji, AT rich intera... 29 3.5
BC054499-1|AAH54499.1| 1559|Homo sapiens jumonji, AT rich intera... 29 3.5
AL139396-7|CAI39836.1| 1560|Homo sapiens jumonji, AT rich intera... 29 3.5
AL139396-6|CAI39837.1| 1516|Homo sapiens jumonji, AT rich intera... 29 3.5
AL139396-5|CAI39838.1| 1557|Homo sapiens jumonji, AT rich intera... 29 3.5
AL139396-4|CAI39835.1| 378|Homo sapiens jumonji, AT rich intera... 29 3.5
AF273841-1|AAG00951.1| 1539|Homo sapiens SMCY protein. 29 3.5
AL133040-1|CAB61368.1| 1350|Homo sapiens hypothetical protein pr... 29 4.7
AJ243706-1|CAB63108.1| 1681|Homo sapiens RB-binding protein prot... 29 4.7
AJ132440-1|CAB43532.1| 1544|Homo sapiens PLU-1 protein protein. 29 4.7
AF087481-1|AAD16061.1| 1580|Homo sapiens retinoblastoma binding ... 29 4.7
>U52191-1|AAC50806.1| 1539|Homo sapiens SMCY protein.
Length = 1539
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -1
Query: 303 LHLHFLETAWCWLIEYYWSFSFQY 232
L++ + +A+CW IE +WS+S Y
Sbjct: 492 LYVGMVFSAFCWHIEDHWSYSINY 515
>L25270-1|AAA61302.1| 1560|Homo sapiens XE169 protein.
Length = 1560
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -1
Query: 303 LHLHFLETAWCWLIEYYWSFSFQY 232
L++ + +A+CW IE +WS+S Y
Sbjct: 502 LYVGMVFSAFCWHIEDHWSYSINY 525
>EF613277-1|ABR13544.1| 1440|Homo sapiens JARID1C protein protein.
Length = 1440
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -1
Query: 303 LHLHFLETAWCWLIEYYWSFSFQY 232
L++ + +A+CW IE +WS+S Y
Sbjct: 502 LYVGMVFSAFCWHIEDHWSYSINY 525
>D87072-1|BAA13241.2| 1512|Homo sapiens KIAA0234 protein.
Length = 1512
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -1
Query: 303 LHLHFLETAWCWLIEYYWSFSFQY 232
L++ + +A+CW IE +WS+S Y
Sbjct: 465 LYVGMVFSAFCWHIEDHWSYSINY 488
>BC146767-1|AAI46768.1| 1482|Homo sapiens JARID1D protein protein.
Length = 1482
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -1
Query: 303 LHLHFLETAWCWLIEYYWSFSFQY 232
L++ + +A+CW IE +WS+S Y
Sbjct: 435 LYVGMVFSAFCWHIEDHWSYSINY 458
>BC132721-1|AAI32722.1| 1539|Homo sapiens jumonji, AT rich
interactive domain 1D protein.
Length = 1539
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -1
Query: 303 LHLHFLETAWCWLIEYYWSFSFQY 232
L++ + +A+CW IE +WS+S Y
Sbjct: 492 LYVGMVFSAFCWHIEDHWSYSINY 515
>BC054499-1|AAH54499.1| 1559|Homo sapiens jumonji, AT rich
interactive domain 1C protein.
Length = 1559
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -1
Query: 303 LHLHFLETAWCWLIEYYWSFSFQY 232
L++ + +A+CW IE +WS+S Y
Sbjct: 501 LYVGMVFSAFCWHIEDHWSYSINY 524
>AL139396-7|CAI39836.1| 1560|Homo sapiens jumonji, AT rich
interactive domain 1C protein.
Length = 1560
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -1
Query: 303 LHLHFLETAWCWLIEYYWSFSFQY 232
L++ + +A+CW IE +WS+S Y
Sbjct: 502 LYVGMVFSAFCWHIEDHWSYSINY 525
>AL139396-6|CAI39837.1| 1516|Homo sapiens jumonji, AT rich
interactive domain 1C protein.
Length = 1516
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -1
Query: 303 LHLHFLETAWCWLIEYYWSFSFQY 232
L++ + +A+CW IE +WS+S Y
Sbjct: 461 LYVGMVFSAFCWHIEDHWSYSINY 484
>AL139396-5|CAI39838.1| 1557|Homo sapiens jumonji, AT rich
interactive domain 1C protein.
Length = 1557
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -1
Query: 303 LHLHFLETAWCWLIEYYWSFSFQY 232
L++ + +A+CW IE +WS+S Y
Sbjct: 502 LYVGMVFSAFCWHIEDHWSYSINY 525
>AL139396-4|CAI39835.1| 378|Homo sapiens jumonji, AT rich
interactive domain 1C protein.
Length = 378
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -1
Query: 303 LHLHFLETAWCWLIEYYWSFSFQY 232
L++ + +A+CW IE +WS+S Y
Sbjct: 89 LYVGMVFSAFCWHIEDHWSYSINY 112
>AF273841-1|AAG00951.1| 1539|Homo sapiens SMCY protein.
Length = 1539
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -1
Query: 303 LHLHFLETAWCWLIEYYWSFSFQY 232
L++ + +A+CW IE +WS+S Y
Sbjct: 492 LYVGMVFSAFCWHIEDHWSYSINY 515
>AL133040-1|CAB61368.1| 1350|Homo sapiens hypothetical protein
protein.
Length = 1350
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 324 CTLCLN*LHLHFLETAWCWLIEYYWSFSFQY 232
C + L L++ +++CW IE +WS+S Y
Sbjct: 286 CGMKLPWLYVGMCFSSFCWHIEDHWSYSINY 316
>AJ243706-1|CAB63108.1| 1681|Homo sapiens RB-binding protein
protein.
Length = 1681
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 324 CTLCLN*LHLHFLETAWCWLIEYYWSFSFQY 232
C + L L++ +++CW IE +WS+S Y
Sbjct: 617 CGMKLPWLYVGMCFSSFCWHIEDHWSYSINY 647
>AJ132440-1|CAB43532.1| 1544|Homo sapiens PLU-1 protein protein.
Length = 1544
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 324 CTLCLN*LHLHFLETAWCWLIEYYWSFSFQY 232
C + L L++ +++CW IE +WS+S Y
Sbjct: 480 CGMKLPWLYVGMCFSSFCWHIEDHWSYSINY 510
>AF087481-1|AAD16061.1| 1580|Homo sapiens retinoblastoma binding
protein 2 homolog 1 protein.
Length = 1580
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 324 CTLCLN*LHLHFLETAWCWLIEYYWSFSFQY 232
C + L L++ +++CW IE +WS+S Y
Sbjct: 516 CGMKLPWLYVGMCFSSFCWHIEDHWSYSINY 546
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,884,652
Number of Sequences: 237096
Number of extensions: 840474
Number of successful extensions: 1297
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1297
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2363825726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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