Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30890X
         (369 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2744|AAF48863.1| 1895|Drosophila melanogaster CG15040-P...    32   0.27 
AL035245-1|CAA22835.1|  323|Drosophila melanogaster EG:BACH61I5....    28   4.4  
AE014298-305|AAF45701.1|  323|Drosophila melanogaster CG3600-PA ...    28   4.4  

>AE014298-2744|AAF48863.1| 1895|Drosophila melanogaster CG15040-PA
            protein.
          Length = 1895

 Score = 31.9 bits (69), Expect = 0.27
 Identities = 20/56 (35%), Positives = 27/56 (48%)
 Frame = +3

Query: 201  ENRQGKITKLNTEN*NSNNIQLTNTKQFPKSANEVNLNTKYKKINQIKNQESKNKN 368
            EN Q  I   N EN N NNIQ  N      +   +N N+ +   N   N +SK++N
Sbjct: 1574 ENNQNNIQSQN-ENNNQNNIQSKNQNNNQNNIQSMNENSNHN--NNENNIQSKSQN 1626



 Score = 31.9 bits (69), Expect = 0.27
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +3

Query: 204  NRQGKITKLNTEN*NSNNIQLTNTKQFPKSANEVNLNTKYKKINQIKNQESKNKN 368
            N Q  I   N  N N NNIQ  +     K+ N    N + K  N I+++   N+N
Sbjct: 1790 NNQNNIQSKNQNN-NQNNIQSKSQNNQSKNQNNNQNNIQSKNQNNIQSKNQNNQN 1843



 Score = 31.5 bits (68), Expect = 0.36
 Identities = 20/54 (37%), Positives = 24/54 (44%)
 Frame = +3

Query: 201  ENRQGKITKLNTEN*NSNNIQLTNTKQFPKSANEVNLNTKYKKINQIKNQESKN 362
            EN Q  I + N EN N NNIQ  N           N N     I Q KN+ ++N
Sbjct: 1527 ENNQNNIQRKN-ENNNQNNIQSQNENNIQSMNENSNHNNNENNI-QSKNENNQN 1578



 Score = 31.5 bits (68), Expect = 0.36
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = +3

Query: 204  NRQGKITKLNTEN*NSNNIQLTNTKQFPKSANEVNLNTKYKKI-NQIKNQESKNKN 368
            N Q  I   N  N N NNIQ  N      +    N N     I ++ +N +SKN+N
Sbjct: 1766 NNQNNIQSKNQNN-NQNNIQSKNQNNNQNNIQSKNQNNNQNNIQSKSQNNQSKNQN 1820



 Score = 29.9 bits (64), Expect = 1.1
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = +3

Query: 204  NRQGKITKLNTEN*NSNNIQLTNTKQFPKSANEVNLNTKYKKINQIKNQ-ESKNKN 368
            N Q  I   N  N N NNIQ  N      +    + N + K  N  +N  +SKN+N
Sbjct: 1778 NNQNNIQSKNQNN-NQNNIQSKNQNNNQNNIQSKSQNNQSKNQNNNQNNIQSKNQN 1832



 Score = 29.9 bits (64), Expect = 1.1
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +3

Query: 237  EN*NSNNIQLTNTKQF-PKSANEVNLNTKYKKINQIKNQESKNKN 368
            +N N NNIQ  N      K+ N  N N + K  N   N +SKN+N
Sbjct: 1819 QNNNQNNIQSKNQNNIQSKNQNNQN-NIQSKNQNNQNNMQSKNQN 1862



 Score = 29.1 bits (62), Expect = 1.9
 Identities = 21/55 (38%), Positives = 28/55 (50%)
 Frame = +3

Query: 204  NRQGKITKLNTEN*NSNNIQLTNTKQFPKSANEVNLNTKYKKINQIKNQESKNKN 368
            N QG I   N +N N NNIQ  N        N+ N+  K +  NQ  N +S+N+N
Sbjct: 1505 NNQGNIES-NDQNNNQNNIQSKNEN------NQNNIQRKNENNNQ-NNIQSQNEN 1551



 Score = 28.7 bits (61), Expect = 2.5
 Identities = 21/55 (38%), Positives = 29/55 (52%)
 Frame = +3

Query: 204  NRQGKITKLNTEN*NSNNIQLTNTKQFPKSANEVNLNTKYKKINQIKNQESKNKN 368
            N Q  I   N  N N NNIQ  N     ++ N+ N+ +K +  NQ  N +SKN+N
Sbjct: 1754 NNQINIQSKNQNN-NQNNIQSKN-----QNNNQNNIQSKNQNNNQ-NNIQSKNQN 1801



 Score = 28.3 bits (60), Expect = 3.3
 Identities = 18/59 (30%), Positives = 32/59 (54%)
 Frame = +3

Query: 192  IQ*ENRQGKITKLNTEN*NSNNIQLTNTKQFPKSANEVNLNTKYKKINQIKNQESKNKN 368
            IQ +N       + ++N N+N   + + K+   S N+ N+ +K +  NQ  N +SKN+N
Sbjct: 1639 IQSKNESNNQNNIQSKNQNNNQNNIQSKKE---SNNQNNIQSKSQNNNQ--NIQSKNEN 1692



 Score = 27.1 bits (57), Expect = 7.7
 Identities = 16/53 (30%), Positives = 29/53 (54%)
 Frame = +3

Query: 210  QGKITKLNTEN*NSNNIQLTNTKQFPKSANEVNLNTKYKKINQIKNQESKNKN 368
            Q +   + + N N+N I + +  Q   + N+ N+ +K +  NQ  N +SKN+N
Sbjct: 1741 QSRNQNMQSRNQNNNQINIQSKNQ---NNNQNNIQSKNQNNNQ-NNIQSKNQN 1789


>AL035245-1|CAA22835.1|  323|Drosophila melanogaster EG:BACH61I5.1
           protein.
          Length = 323

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 16/51 (31%), Positives = 19/51 (37%)
 Frame = +3

Query: 216 KITKLNTEN*NSNNIQLTNTKQFPKSANEVNLNTKYKKINQIKNQESKNKN 368
           K  K N+ N NSN     NT     +    N NT     N   N  + N N
Sbjct: 252 KCNKCNSHNNNSNCNNNNNTISNNNNNTSSNTNTNSNSNNNANNNNNNNNN 302


>AE014298-305|AAF45701.1|  323|Drosophila melanogaster CG3600-PA
           protein.
          Length = 323

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 16/51 (31%), Positives = 19/51 (37%)
 Frame = +3

Query: 216 KITKLNTEN*NSNNIQLTNTKQFPKSANEVNLNTKYKKINQIKNQESKNKN 368
           K  K N+ N NSN     NT     +    N NT     N   N  + N N
Sbjct: 252 KCNKCNSHNNNSNCNNNNNTISNNNNNTSSNTNTNSNSNNNANNNNNNNNN 302


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,026,693
Number of Sequences: 53049
Number of extensions: 261906
Number of successful extensions: 662
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 662
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 964005624
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)