BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30890X (369 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 22 2.0 DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 2.0 DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 2.0 DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 2.0 DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 2.0 AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 22 2.0 EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 4.6 EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 4.6 AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 21 4.6 AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 20 8.1 >U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin protein. Length = 377 Score = 22.2 bits (45), Expect = 2.0 Identities = 9/26 (34%), Positives = 17/26 (65%) Frame = +3 Query: 291 SANEVNLNTKYKKINQIKNQESKNKN 368 +A+E N+ + KK+N + S+N+N Sbjct: 244 AAHEKNMREQAKKMNVASLRSSENQN 269 >DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 22.2 bits (45), Expect = 2.0 Identities = 9/28 (32%), Positives = 12/28 (42%) Frame = +3 Query: 285 PKSANEVNLNTKYKKINQIKNQESKNKN 368 PK + ++ N KY N N N N Sbjct: 79 PKIISSLSNNYKYSNYNNYNNNNYNNNN 106 >DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 22.2 bits (45), Expect = 2.0 Identities = 9/28 (32%), Positives = 12/28 (42%) Frame = +3 Query: 285 PKSANEVNLNTKYKKINQIKNQESKNKN 368 PK + ++ N KY N N N N Sbjct: 79 PKIISSLSNNYKYSNYNNYNNNNYNNNN 106 >DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 22.2 bits (45), Expect = 2.0 Identities = 9/28 (32%), Positives = 12/28 (42%) Frame = +3 Query: 285 PKSANEVNLNTKYKKINQIKNQESKNKN 368 PK + ++ N KY N N N N Sbjct: 79 PKIISSLSNNYKYSNYNNYNNNNYNNNN 106 >DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 22.2 bits (45), Expect = 2.0 Identities = 9/28 (32%), Positives = 12/28 (42%) Frame = +3 Query: 285 PKSANEVNLNTKYKKINQIKNQESKNKN 368 PK + ++ N KY N N N N Sbjct: 79 PKIISSLSNNYKYSNYNNYNNNNYNNNN 106 >AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodopsin protein. Length = 154 Score = 22.2 bits (45), Expect = 2.0 Identities = 9/26 (34%), Positives = 17/26 (65%) Frame = +3 Query: 291 SANEVNLNTKYKKINQIKNQESKNKN 368 +A+E N+ + KK+N + S+N+N Sbjct: 120 AAHEKNMREQAKKMNVASLRSSENQN 145 >EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. Length = 684 Score = 21.0 bits (42), Expect = 4.6 Identities = 8/14 (57%), Positives = 11/14 (78%) Frame = +3 Query: 318 KYKKINQIKNQESK 359 KYK I +I N+ES+ Sbjct: 320 KYKYIREIMNKESR 333 >EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. Length = 684 Score = 21.0 bits (42), Expect = 4.6 Identities = 8/14 (57%), Positives = 11/14 (78%) Frame = +3 Query: 318 KYKKINQIKNQESK 359 KYK I +I N+ES+ Sbjct: 320 KYKYIREIMNKESR 333 >AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II protein. Length = 190 Score = 21.0 bits (42), Expect = 4.6 Identities = 6/10 (60%), Positives = 8/10 (80%) Frame = +1 Query: 154 PEWDSYVPES 183 PEWD+ PE+ Sbjct: 134 PEWDTVTPEA 143 >AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate receptor 1 protein. Length = 953 Score = 20.2 bits (40), Expect = 8.1 Identities = 7/16 (43%), Positives = 10/16 (62%) Frame = +3 Query: 276 KQFPKSANEVNLNTKY 323 K F ++ NE+N N Y Sbjct: 47 KYFEQTLNELNFNLNY 62 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 94,175 Number of Sequences: 438 Number of extensions: 1807 Number of successful extensions: 13 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 13 length of database: 146,343 effective HSP length: 51 effective length of database: 124,005 effective search space used: 8804355 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 39 (20.8 bits)
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