Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30889
         (604 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr...    33   0.16 
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AL132876-29|CAF31497.1|  840|Caenorhabditis elegans Hypothetical...    29   3.4  
AL132876-27|CAD21658.1|  906|Caenorhabditis elegans Hypothetical...    29   3.4  
Z46343-7|CAE17971.2|  187|Caenorhabditis elegans Hypothetical pr...    28   5.9  

>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical
           protein H02I12.1 protein.
          Length = 1319

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +3

Query: 96  QKYFLCIDGHPRVLYCGGESAFDDLTSTCVSADEVGACPAE 218
           QKY  C +G   V  CG    F++ T  C   DEV  C ++
Sbjct: 706 QKYIQCSNGAAIVRRCGESLYFNEATQECTYRDEVPECGSQ 746



 Score = 33.1 bits (72), Expect = 0.16
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +3

Query: 87   NNCQKYFLCIDGHPRVLYCGGESAFDDLTSTCVSADEVGACPAE 218
            NNC+ ++ C+ G   V+ C   + F+ L S C     V +C  +
Sbjct: 1256 NNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAVPSCSGQ 1299



 Score = 32.7 bits (71), Expect = 0.21
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +3

Query: 84  DNNC-QKYFLCIDGHPRVLYCGGESAFDDLTSTCVSADEVGAC 209
           D  C QKY  C D    V  C G   FD+ + +C   DEV  C
Sbjct: 794 DLGCSQKYIQCSDSAASVRECEGSLYFDERSQSCRFRDEVFKC 836


>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
            ZK783.1 protein.
          Length = 2585

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
 Frame = +3

Query: 87   NNCQKYFLCIDGHPRVLYCGGESAFDDLTSTCVSADE---VGACPAE 218
            N+C K+  CID HP   +C     F      C   DE    G C  E
Sbjct: 1865 NDCNKHAECIDIHPDSHFCSCPDGFIGDGMICDDVDECNNAGMCDDE 1911


>AL132876-29|CAF31497.1|  840|Caenorhabditis elegans Hypothetical
           protein Y105E8A.7b protein.
          Length = 840

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 90  NCQKYFLCIDGHPRVLYCGGESAF 161
           +CQK  + +DG PR  YCG +  F
Sbjct: 690 SCQKAVIRVDGGPRSEYCGTKREF 713


>AL132876-27|CAD21658.1|  906|Caenorhabditis elegans Hypothetical
           protein Y105E8A.7a protein.
          Length = 906

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 90  NCQKYFLCIDGHPRVLYCGGESAF 161
           +CQK  + +DG PR  YCG +  F
Sbjct: 690 SCQKAVIRVDGGPRSEYCGTKREF 713


>Z46343-7|CAE17971.2|  187|Caenorhabditis elegans Hypothetical
           protein T23F11.6 protein.
          Length = 187

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 9   LGFRCPEVPISRELGPPAGYRYYRSDNNCQKYFLC 113
           L + CP    S  L PP  +R   + N+CQ  ++C
Sbjct: 22  LSYACPPSLDSLNLPPPVIHRECLTRNSCQNGYIC 56


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,333,710
Number of Sequences: 27780
Number of extensions: 244800
Number of successful extensions: 607
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)