Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30888
         (749 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   2.0  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   2.0  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   2.0  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   2.0  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    23   2.6  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   2.6  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = +2

Query: 53  LKKVLEAIKDLLTQATFDC 109
           LK+  + ++ +LTQ++F+C
Sbjct: 67  LKRFYKVVEKILTQSSFEC 85


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 348 FLLIWALKNKCDIVSII 298
           F   WA  N C++++I+
Sbjct: 326 FFTFWAFSNACEVMAIV 342


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 629 SDVACQYLNYFTKATSLSP 685
           +D A Q +N F KAT +SP
Sbjct: 363 NDEAQQEINMFLKATEMSP 381


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 348 FLLIWALKNKCDIVSII 298
           F   WA  N C++++I+
Sbjct: 326 FFTFWAFSNACEVMAIV 342


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -1

Query: 743 RECGTPPPKERLLTSTAA 690
           ++C +P P ++L TST +
Sbjct: 45  KDCSSPTPSDKLNTSTTS 62


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 91  TGHFRLR*QWNSVTGYGQLSCVSRVTHSP 177
           T  F+L   W  +TG+G++  V    H+P
Sbjct: 103 TTPFKLPYFWKMLTGFGKIEQVLPPHHAP 131



 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = -1

Query: 320 NVTLSALSCAFIVTVSLSPAHLESLTCCLDSCPLR 216
           N++++   C +I +  L    +  LT  L+S P+R
Sbjct: 42  NLSINYCICGYIFSAILFSLSILGLTEDLNSAPIR 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,047
Number of Sequences: 336
Number of extensions: 3508
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)