Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30888
(749 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M33950-1|AAA28746.1| 260|Drosophila melanogaster protein ( D.me... 146 2e-35
AY122197-1|AAM52709.1| 260|Drosophila melanogaster LD45889p pro... 146 2e-35
AE013599-2982|AAS64796.1| 260|Drosophila melanogaster CG9193-PB... 146 2e-35
AE013599-2981|AAF57493.1| 260|Drosophila melanogaster CG9193-PA... 146 2e-35
BT021268-1|AAX33416.1| 216|Drosophila melanogaster RE50044p pro... 112 4e-25
AE014134-3147|AAF53835.1| 255|Drosophila melanogaster CG10262-P... 112 4e-25
AB195794-1|BAE94851.1| 255|Drosophila melanogaster proliferatin... 112 4e-25
AY167137-3|AAO17673.1| 36|Drosophila melanogaster PCNA protein. 59 7e-09
BT011030-1|AAR30190.1| 147|Drosophila melanogaster RE45652p pro... 30 3.9
AE014296-1917|AAS65040.1| 235|Drosophila melanogaster CG6216-PB... 30 3.9
AE014296-1916|AAF50087.2| 355|Drosophila melanogaster CG6216-PA... 30 3.9
U86010-1|AAB95640.1| 1920|Drosophila melanogaster zinc-finger nu... 29 6.8
AE014297-4235|AAF56793.2| 5106|Drosophila melanogaster CG1842-PA... 29 8.9
AE014297-1654|AAF54928.2| 1012|Drosophila melanogaster CG32473-P... 29 8.9
>M33950-1|AAA28746.1| 260|Drosophila melanogaster protein (
D.melanogaster proliferatingcell nuclear antigen (PCNA)
gene, complete cds. ).
Length = 260
Score = 146 bits (355), Expect = 2e-35
Identities = 65/86 (75%), Positives = 76/86 (88%)
Frame = +1
Query: 256 KCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRM 435
KCA ++D VT+KAQDNAD VT +FES NQEKVSDYEMKLMNLD EHLGIPET++SC +RM
Sbjct: 80 KCANNEDNVTMKAQDNADTVTIMFESANQEKVSDYEMKLMNLDQEHLGIPETDFSCVVRM 139
Query: 436 PSSEFARICRDLSQFGESMVISCTKK 513
P+ EFARICRDL+QF ES+VI CTK+
Sbjct: 140 PAMEFARICRDLAQFSESVVICCTKE 165
Score = 139 bits (337), Expect = 3e-33
Identities = 64/78 (82%), Positives = 75/78 (96%)
Frame = +2
Query: 20 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 199
MFEARL +++ILKK+L+AIKDLL +ATFDC D+GIQLQAMDNSHVSLVSLTLR+DGFDK+
Sbjct: 1 MFEARLGQATILKKILDAIKDLLNEATFDCSDSGIQLQAMDNSHVSLVSLTLRSDGFDKF 60
Query: 200 RCDRNISMGMNLGSMSKI 253
RCDRN+SMGMNLGSM+KI
Sbjct: 61 RCDRNLSMGMNLGSMAKI 78
Score = 58.0 bits (134), Expect = 1e-08
Identities = 28/34 (82%), Positives = 29/34 (85%)
Frame = +2
Query: 638 ACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRI 739
AC+YLN FTKAT LS QVQLSM ADVPLVVEY I
Sbjct: 208 ACRYLNAFTKATPLSTQVQLSMCADVPLVVEYAI 241
Score = 49.6 bits (113), Expect = 4e-06
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +3
Query: 507 KEGVKFSATGDIGSANVKLAQTASIDQXXXXXXXXXXXXXTLT 635
KEGVKFSA+GD+G+AN+KLAQT S+D+ TLT
Sbjct: 164 KEGVKFSASGDVGTANIKLAQTGSVDKEEEAVIIEMQEPVTLT 206
>AY122197-1|AAM52709.1| 260|Drosophila melanogaster LD45889p
protein.
Length = 260
Score = 146 bits (355), Expect = 2e-35
Identities = 65/86 (75%), Positives = 76/86 (88%)
Frame = +1
Query: 256 KCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRM 435
KCA ++D VT+KAQDNAD VT +FES NQEKVSDYEMKLMNLD EHLGIPET++SC +RM
Sbjct: 80 KCANNEDNVTMKAQDNADTVTIMFESANQEKVSDYEMKLMNLDQEHLGIPETDFSCVVRM 139
Query: 436 PSSEFARICRDLSQFGESMVISCTKK 513
P+ EFARICRDL+QF ES+VI CTK+
Sbjct: 140 PAMEFARICRDLAQFSESVVICCTKE 165
Score = 139 bits (337), Expect = 3e-33
Identities = 64/78 (82%), Positives = 75/78 (96%)
Frame = +2
Query: 20 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 199
MFEARL +++ILKK+L+AIKDLL +ATFDC D+GIQLQAMDNSHVSLVSLTLR+DGFDK+
Sbjct: 1 MFEARLGQATILKKILDAIKDLLNEATFDCSDSGIQLQAMDNSHVSLVSLTLRSDGFDKF 60
Query: 200 RCDRNISMGMNLGSMSKI 253
RCDRN+SMGMNLGSM+KI
Sbjct: 61 RCDRNLSMGMNLGSMAKI 78
Score = 58.0 bits (134), Expect = 1e-08
Identities = 28/34 (82%), Positives = 29/34 (85%)
Frame = +2
Query: 638 ACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRI 739
AC+YLN FTKAT LS QVQLSM ADVPLVVEY I
Sbjct: 208 ACRYLNAFTKATPLSTQVQLSMCADVPLVVEYAI 241
Score = 49.6 bits (113), Expect = 4e-06
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +3
Query: 507 KEGVKFSATGDIGSANVKLAQTASIDQXXXXXXXXXXXXXTLT 635
KEGVKFSA+GD+G+AN+KLAQT S+D+ TLT
Sbjct: 164 KEGVKFSASGDVGTANIKLAQTGSVDKEEEAVIIEMQEPVTLT 206
>AE013599-2982|AAS64796.1| 260|Drosophila melanogaster CG9193-PB,
isoform B protein.
Length = 260
Score = 146 bits (355), Expect = 2e-35
Identities = 65/86 (75%), Positives = 76/86 (88%)
Frame = +1
Query: 256 KCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRM 435
KCA ++D VT+KAQDNAD VT +FES NQEKVSDYEMKLMNLD EHLGIPET++SC +RM
Sbjct: 80 KCANNEDNVTMKAQDNADTVTIMFESANQEKVSDYEMKLMNLDQEHLGIPETDFSCVVRM 139
Query: 436 PSSEFARICRDLSQFGESMVISCTKK 513
P+ EFARICRDL+QF ES+VI CTK+
Sbjct: 140 PAMEFARICRDLAQFSESVVICCTKE 165
Score = 139 bits (337), Expect = 3e-33
Identities = 64/78 (82%), Positives = 75/78 (96%)
Frame = +2
Query: 20 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 199
MFEARL +++ILKK+L+AIKDLL +ATFDC D+GIQLQAMDNSHVSLVSLTLR+DGFDK+
Sbjct: 1 MFEARLGQATILKKILDAIKDLLNEATFDCSDSGIQLQAMDNSHVSLVSLTLRSDGFDKF 60
Query: 200 RCDRNISMGMNLGSMSKI 253
RCDRN+SMGMNLGSM+KI
Sbjct: 61 RCDRNLSMGMNLGSMAKI 78
Score = 58.0 bits (134), Expect = 1e-08
Identities = 28/34 (82%), Positives = 29/34 (85%)
Frame = +2
Query: 638 ACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRI 739
AC+YLN FTKAT LS QVQLSM ADVPLVVEY I
Sbjct: 208 ACRYLNAFTKATPLSTQVQLSMCADVPLVVEYAI 241
Score = 49.6 bits (113), Expect = 4e-06
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +3
Query: 507 KEGVKFSATGDIGSANVKLAQTASIDQXXXXXXXXXXXXXTLT 635
KEGVKFSA+GD+G+AN+KLAQT S+D+ TLT
Sbjct: 164 KEGVKFSASGDVGTANIKLAQTGSVDKEEEAVIIEMQEPVTLT 206
>AE013599-2981|AAF57493.1| 260|Drosophila melanogaster CG9193-PA,
isoform A protein.
Length = 260
Score = 146 bits (355), Expect = 2e-35
Identities = 65/86 (75%), Positives = 76/86 (88%)
Frame = +1
Query: 256 KCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRM 435
KCA ++D VT+KAQDNAD VT +FES NQEKVSDYEMKLMNLD EHLGIPET++SC +RM
Sbjct: 80 KCANNEDNVTMKAQDNADTVTIMFESANQEKVSDYEMKLMNLDQEHLGIPETDFSCVVRM 139
Query: 436 PSSEFARICRDLSQFGESMVISCTKK 513
P+ EFARICRDL+QF ES+VI CTK+
Sbjct: 140 PAMEFARICRDLAQFSESVVICCTKE 165
Score = 139 bits (337), Expect = 3e-33
Identities = 64/78 (82%), Positives = 75/78 (96%)
Frame = +2
Query: 20 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 199
MFEARL +++ILKK+L+AIKDLL +ATFDC D+GIQLQAMDNSHVSLVSLTLR+DGFDK+
Sbjct: 1 MFEARLGQATILKKILDAIKDLLNEATFDCSDSGIQLQAMDNSHVSLVSLTLRSDGFDKF 60
Query: 200 RCDRNISMGMNLGSMSKI 253
RCDRN+SMGMNLGSM+KI
Sbjct: 61 RCDRNLSMGMNLGSMAKI 78
Score = 58.0 bits (134), Expect = 1e-08
Identities = 28/34 (82%), Positives = 29/34 (85%)
Frame = +2
Query: 638 ACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRI 739
AC+YLN FTKAT LS QVQLSM ADVPLVVEY I
Sbjct: 208 ACRYLNAFTKATPLSTQVQLSMCADVPLVVEYAI 241
Score = 49.6 bits (113), Expect = 4e-06
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +3
Query: 507 KEGVKFSATGDIGSANVKLAQTASIDQXXXXXXXXXXXXXTLT 635
KEGVKFSA+GD+G+AN+KLAQT S+D+ TLT
Sbjct: 164 KEGVKFSASGDVGTANIKLAQTGSVDKEEEAVIIEMQEPVTLT 206
>BT021268-1|AAX33416.1| 216|Drosophila melanogaster RE50044p
protein.
Length = 216
Score = 112 bits (270), Expect = 4e-25
Identities = 47/86 (54%), Positives = 65/86 (75%)
Frame = +1
Query: 256 KCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRM 435
KCA D VTIKA D + +T FES +E+ +DYE+KL+NLD +H+ IP+ +Y+C I++
Sbjct: 41 KCANSDDAVTIKAVDRPEKITLSFESDGKERTADYELKLLNLDQDHMEIPKKDYTCFIQL 100
Query: 436 PSSEFARICRDLSQFGESMVISCTKK 513
PSSEFARICRD+S F ES+ I+C+ K
Sbjct: 101 PSSEFARICRDMSMFDESLTIACSSK 126
Score = 58.0 bits (134), Expect = 1e-08
Identities = 23/39 (58%), Positives = 34/39 (87%)
Frame = +2
Query: 137 MDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKI 253
MDNSHVSLV+L+L +D F+K+ CDRN+S+G++L S+ K+
Sbjct: 1 MDNSHVSLVALSLASDCFEKFHCDRNVSLGLDLKSLGKV 39
Score = 38.7 bits (86), Expect = 0.008
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +2
Query: 638 ACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRI 739
A +YLN FTKAT L+ +V+L +S + PL+VEY I
Sbjct: 164 AGRYLNTFTKATPLADRVKLYLSDERPLLVEYPI 197
Score = 29.9 bits (64), Expect = 3.9
Identities = 10/25 (40%), Positives = 20/25 (80%)
Frame = +3
Query: 510 EGVKFSATGDIGSANVKLAQTASID 584
+G++F A GD+G+AN++L+ ++D
Sbjct: 126 KGIRFLAKGDLGTANIQLSAGTAMD 150
>AE014134-3147|AAF53835.1| 255|Drosophila melanogaster CG10262-PA
protein.
Length = 255
Score = 112 bits (270), Expect = 4e-25
Identities = 47/86 (54%), Positives = 65/86 (75%)
Frame = +1
Query: 256 KCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRM 435
KCA D VTIKA D + +T FES +E+ +DYE+KL+NLD +H+ IP+ +Y+C I++
Sbjct: 80 KCANSDDAVTIKAVDRPEKITLSFESDGKERTADYELKLLNLDQDHMEIPKKDYTCFIQL 139
Query: 436 PSSEFARICRDLSQFGESMVISCTKK 513
PSSEFARICRD+S F ES+ I+C+ K
Sbjct: 140 PSSEFARICRDMSMFDESLTIACSSK 165
Score = 103 bits (247), Expect = 3e-22
Identities = 41/78 (52%), Positives = 66/78 (84%)
Frame = +2
Query: 20 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 199
M EARL ++ +LKK+++A+K+++ Q T DC +NG++LQ+MDNSHVSLV+L+L +D F+K+
Sbjct: 1 MLEARLSQTLLLKKIVDALKEIIAQGTLDCSENGLELQSMDNSHVSLVALSLASDCFEKF 60
Query: 200 RCDRNISMGMNLGSMSKI 253
CDRN+S+G++L S+ K+
Sbjct: 61 HCDRNVSLGLDLKSLGKV 78
Score = 38.7 bits (86), Expect = 0.008
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +2
Query: 638 ACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRI 739
A +YLN FTKAT L+ +V+L +S + PL+VEY I
Sbjct: 203 AGRYLNTFTKATPLADRVKLYLSDERPLLVEYPI 236
Score = 29.9 bits (64), Expect = 3.9
Identities = 10/25 (40%), Positives = 20/25 (80%)
Frame = +3
Query: 510 EGVKFSATGDIGSANVKLAQTASID 584
+G++F A GD+G+AN++L+ ++D
Sbjct: 165 KGIRFLAKGDLGTANIQLSAGTAMD 189
>AB195794-1|BAE94851.1| 255|Drosophila melanogaster proliferating
cell nuclear antigen2 protein.
Length = 255
Score = 112 bits (270), Expect = 4e-25
Identities = 47/86 (54%), Positives = 65/86 (75%)
Frame = +1
Query: 256 KCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRM 435
KCA D VTIKA D + +T FES +E+ +DYE+KL+NLD +H+ IP+ +Y+C I++
Sbjct: 80 KCANSDDAVTIKAVDRPEKITLSFESDGKERTADYELKLLNLDQDHMEIPKKDYTCFIQL 139
Query: 436 PSSEFARICRDLSQFGESMVISCTKK 513
PSSEFARICRD+S F ES+ I+C+ K
Sbjct: 140 PSSEFARICRDMSMFDESLTIACSSK 165
Score = 103 bits (247), Expect = 3e-22
Identities = 41/78 (52%), Positives = 66/78 (84%)
Frame = +2
Query: 20 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 199
M EARL ++ +LKK+++A+K+++ Q T DC +NG++LQ+MDNSHVSLV+L+L +D F+K+
Sbjct: 1 MLEARLSQTLLLKKIVDALKEIIAQGTLDCSENGLELQSMDNSHVSLVALSLASDCFEKF 60
Query: 200 RCDRNISMGMNLGSMSKI 253
CDRN+S+G++L S+ K+
Sbjct: 61 HCDRNVSLGLDLKSLGKV 78
Score = 38.7 bits (86), Expect = 0.008
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +2
Query: 638 ACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRI 739
A +YLN FTKAT L+ +V+L +S + PL+VEY I
Sbjct: 203 AGRYLNTFTKATPLADRVKLYLSDERPLLVEYPI 236
Score = 29.9 bits (64), Expect = 3.9
Identities = 10/25 (40%), Positives = 20/25 (80%)
Frame = +3
Query: 510 EGVKFSATGDIGSANVKLAQTASID 584
+G++F A GD+G+AN++L+ ++D
Sbjct: 165 KGIRFLAKGDLGTANIQLSAGTAMD 189
>AY167137-3|AAO17673.1| 36|Drosophila melanogaster PCNA protein.
Length = 36
Score = 58.8 bits (136), Expect = 7e-09
Identities = 26/36 (72%), Positives = 33/36 (91%)
Frame = +2
Query: 20 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQ 127
MFEARL +++ILKK+L+AIKDLL +ATFDC D+GIQ
Sbjct: 1 MFEARLGQATILKKILDAIKDLLNEATFDCSDSGIQ 36
>BT011030-1|AAR30190.1| 147|Drosophila melanogaster RE45652p
protein.
Length = 147
Score = 29.9 bits (64), Expect = 3.9
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 343 EKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSSEFARICR 465
EKV DY+M+ + + E + I E +Y+ +MP E ++ R
Sbjct: 36 EKVPDYKMRPVKVRAEEIKIREKDYA--FKMPKKEMRKLLR 74
>AE014296-1917|AAS65040.1| 235|Drosophila melanogaster CG6216-PB,
isoform B protein.
Length = 235
Score = 29.9 bits (64), Expect = 3.9
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 343 EKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSSEFARICR 465
EKV DY+M+ + + E + I E +Y+ +MP E ++ R
Sbjct: 36 EKVPDYKMRPVKVRAEEIKIREKDYA--FKMPKKEMRKLLR 74
>AE014296-1916|AAF50087.2| 355|Drosophila melanogaster CG6216-PA,
isoform A protein.
Length = 355
Score = 29.9 bits (64), Expect = 3.9
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 343 EKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSSEFARICR 465
EKV DY+M+ + + E + I E +Y+ +MP E ++ R
Sbjct: 36 EKVPDYKMRPVKVRAEEIKIREKDYA--FKMPKKEMRKLLR 74
>U86010-1|AAB95640.1| 1920|Drosophila melanogaster zinc-finger
nuclear protein hindsightprotein.
Length = 1920
Score = 29.1 bits (62), Expect = 6.8
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 217 LNGHESRQHVKDSKCAGDKDTVTIKAQDNADN 312
LN H+ +QH + S D+D V +A+++ D+
Sbjct: 75 LNHHQQQQHHQQSDLLSDEDVVEAEAEEDEDD 106
>AE014297-4235|AAF56793.2| 5106|Drosophila melanogaster CG1842-PA
protein.
Length = 5106
Score = 28.7 bits (61), Expect = 8.9
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 505 CMKSPLILQTVRDPGRF*QIQNLACE*CSCIQSL-EYLN 392
C K+PL++ PGR +IQ L +C +SL EYL+
Sbjct: 2114 CAKNPLVVPFCTVPGRLVEIQGLGIGLENCQKSLNEYLD 2152
>AE014297-1654|AAF54928.2| 1012|Drosophila melanogaster CG32473-PA,
isoform A protein.
Length = 1012
Score = 28.7 bits (61), Expect = 8.9
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +2
Query: 11 NINMFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGF 190
+IN+ E+R L L++VL K A+FDCD L ++ S++S + ADG
Sbjct: 202 SINLDESRELLLITLREVLSMNKAYTLSASFDCD-----LSSLVGSYISNYT---NADGV 253
Query: 191 DK 196
D+
Sbjct: 254 DR 255
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,331,151
Number of Sequences: 53049
Number of extensions: 680740
Number of successful extensions: 1940
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1940
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -