Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30886
         (637 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    25   0.47 
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    25   0.47 
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   1.9  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   5.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   5.7  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   7.6  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   7.6  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    21   7.6  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 631 TTSQRWSRGSTPRSLNTSRANNHHIKP 551
           T +Q WSRG+T  SL+ S  +   + P
Sbjct: 18  TQAQHWSRGNTWLSLDNSNMSMSSVGP 44


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 631 TTSQRWSRGSTPRSLNTSRANNHHIKP 551
           T +Q WSRG+T  SL+ S  +   + P
Sbjct: 18  TQAQHWSRGNTWLSLDNSNMSMSSVGP 44


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 633 PQHPSAGHGEAHHEASTLH 577
           P H + GHG +H  A+  H
Sbjct: 414 PHHHTMGHGHSHIHATPHH 432


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 278 RDEMTNTSRGSRWLRQHEQ 222
           +D+  N  RG+++L  H+Q
Sbjct: 264 QDQQANIGRGAQYLYLHQQ 282


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 6/30 (20%), Positives = 16/30 (53%)
 Frame = +1

Query: 409 VLDPAQDHQPITEASYVNIPVIALCNTDSP 498
           ++DP ++++   E   + IP++   +   P
Sbjct: 167 IVDPVEENETYDEFDTIRIPIVRSLSKSPP 196


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = +2

Query: 518 YPMQHQVFPLYWFDVVVV 571
           +P  ++++P Y+FD  V+
Sbjct: 159 FPAIYEIYPNYFFDSSVI 176


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = +2

Query: 518 YPMQHQVFPLYWFDVVVV 571
           +P  ++++P Y+FD  V+
Sbjct: 159 FPAIYEIYPNYFFDSSVI 176


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +1

Query: 181 CDQLASCLGKTCSGCSCCRSHREPRDVFVISSRPFGQRAV 300
           CD      G  CS  S   S  +  + FV  S+ F +R++
Sbjct: 7   CDLATPRTGTNCSSGSSSDSDGQTDEGFVGDSQGFFRRSI 46


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,504
Number of Sequences: 438
Number of extensions: 4597
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)