Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30884
(812 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P12004 Cluster: Proliferating cell nuclear antigen; n=8... 141 2e-32
UniRef50_Q9ZW35 Cluster: Proliferating cell nuclear antigen 2; n... 133 4e-30
UniRef50_Q5K7Y2 Cluster: Proliferating cell nuclear antigen; n=1... 118 2e-25
UniRef50_Q9VIT0 Cluster: CG10262-PA; n=3; Sophophora|Rep: CG1026... 109 6e-23
UniRef50_A6RIU4 Cluster: Proliferating cell nuclear antigen; n=2... 106 8e-22
UniRef50_Q8X1W1 Cluster: Proliferating cell nuclear antigen; n=1... 104 3e-21
UniRef50_Q4P3B0 Cluster: Proliferating cell nuclear antigen; n=1... 96 8e-19
UniRef50_P11038 Cluster: Probable DNA polymerase sliding clamp; ... 89 9e-17
UniRef50_O02115 Cluster: Proliferating cell nuclear antigen; n=6... 87 4e-16
UniRef50_A0BN24 Cluster: Proliferating cell nuclear antigen; n=4... 87 7e-16
UniRef50_Q8GZE5 Cluster: Proliferating cell nuclear antigen; n=1... 85 2e-15
UniRef50_P15873 Cluster: Proliferating cell nuclear antigen; n=1... 84 4e-15
UniRef50_Q5CW01 Cluster: Proliferating cell nuclear antigen PCNA... 82 1e-14
UniRef50_Q4QF35 Cluster: Proliferating cell nuclear antigen; n=6... 82 1e-14
UniRef50_A5Z0S2 Cluster: Proliferating cell nuclear antigen 2; n... 80 8e-14
UniRef50_A2DQV2 Cluster: Proliferating cell nuclear antigen, put... 75 2e-12
UniRef50_Q5CJE0 Cluster: Proliferating cell nuclear antigen; n=2... 74 4e-12
UniRef50_P61074 Cluster: Proliferating cell nuclear antigen; n=8... 72 2e-11
UniRef50_Q98SC0 Cluster: Proliferating cell nuclear antigen; n=1... 71 3e-11
UniRef50_Q9NGR7 Cluster: Proliferating cell nuclear antigen 1; n... 71 3e-11
UniRef50_UPI000049949B Cluster: proliferating cell nuclear antig... 67 4e-10
UniRef50_Q8WSN0 Cluster: Proliferating cell nuclear antigen 2; n... 65 2e-09
UniRef50_A7AVH8 Cluster: Proliferating cell nuclear antigen 1; n... 63 9e-09
UniRef50_A7AUH5 Cluster: Proliferating cell nuclear antigen; n=3... 60 5e-08
UniRef50_A2F7D4 Cluster: Proliferating cell nuclear antigen, put... 58 3e-07
UniRef50_Q4A3A5 Cluster: Putative proliferating cell nuclear ant... 57 5e-07
UniRef50_Q64803 Cluster: 20.6 kDa protein; n=1; Autographa calif... 52 1e-05
UniRef50_O10308 Cluster: Probable DNA polymerase sliding clamp; ... 52 1e-05
UniRef50_Q3LWE0 Cluster: Proliferating cell nuclear antigen; n=1... 51 4e-05
UniRef50_Q6LWJ8 Cluster: DNA polymerase sliding clamp; n=8; cell... 51 4e-05
UniRef50_O27367 Cluster: DNA polymerase sliding clamp; n=3; Meth... 47 6e-04
UniRef50_Q7QSA2 Cluster: Proliferating cell nuclear antigen; n=1... 46 9e-04
UniRef50_A7KA48 Cluster: Putative uncharacterized protein Z788R;... 46 0.001
UniRef50_Q84513 Cluster: Probable DNA polymerase sliding clamp 1... 46 0.001
UniRef50_Q9NGR6 Cluster: Proliferating cell nuclear antigen 2; n... 46 0.002
UniRef50_A0RXH7 Cluster: DNA polymerase sliding clamp subunit; n... 46 0.002
UniRef50_Q8SRV9 Cluster: Proliferating cell nuclear antigen; n=1... 42 0.014
UniRef50_Q9HJQ0 Cluster: DNA polymerase sliding clamp; n=5; Ther... 39 0.13
UniRef50_O41056 Cluster: Probable DNA polymerase sliding clamp 2... 39 0.17
UniRef50_Q4KT14 Cluster: PCNA; n=2; Nucleopolyhedrovirus|Rep: PC... 37 0.70
UniRef50_O73947 Cluster: DNA polymerase sliding clamp; n=7; Ther... 37 0.70
UniRef50_Q74MV1 Cluster: DNA polymerase sliding clamp; n=2; Nano... 37 0.70
UniRef50_Q8QNE7 Cluster: EsV-1-132; n=2; Phaeovirus|Rep: EsV-1-1... 36 0.92
UniRef50_A2BN98 Cluster: DNA polymerase sliding clamp B2; n=1; H... 36 0.92
UniRef50_Q016T8 Cluster: Chromosome 06 contig 1, DNA sequence; n... 36 1.6
UniRef50_A3GFZ3 Cluster: Putative uncharacterized protein FKH3; ... 36 1.6
UniRef50_A7JF77 Cluster: Putative uncharacterized protein; n=9; ... 34 3.7
UniRef50_A7C6V8 Cluster: Putative uncharacterized protein; n=1; ... 34 3.7
UniRef50_A5K9Z2 Cluster: Putative uncharacterized protein; n=1; ... 34 3.7
UniRef50_A7AQD3 Cluster: Putative uncharacterized protein; n=1; ... 34 4.9
UniRef50_A1CS92 Cluster: Eukaryotic translation initiation facto... 34 4.9
UniRef50_A3HAI1 Cluster: DNA polymerase sliding clamp; n=1; Cald... 34 4.9
UniRef50_A7IV77 Cluster: Putative uncharacterized protein M697L;... 33 6.5
UniRef50_Q8EBA7 Cluster: Tetraheme cytochrome c; n=2; Shewanella... 33 6.5
UniRef50_Q5JH70 Cluster: Oligosaccharyl transferase, STT3 subuni... 33 6.5
UniRef50_A7K9E0 Cluster: Putative uncharacterized protein Z530L;... 33 8.6
UniRef50_P38947 Cluster: Succinate-semialdehyde dehydrogenase [N... 33 8.6
>UniRef50_P12004 Cluster: Proliferating cell nuclear antigen; n=83;
Eukaryota|Rep: Proliferating cell nuclear antigen - Homo
sapiens (Human)
Length = 261
Score = 141 bits (341), Expect = 2e-32
Identities = 63/91 (69%), Positives = 79/91 (86%), Gaps = 1/91 (1%)
Frame = +3
Query: 255 DRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLD 434
DRN++MG+NL SMSKILKCAG++D +T++A+DNAD + VFE+PNQEKVSDYEMKLM+LD
Sbjct: 63 DRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMDLD 122
Query: 435 LEHLGIPETEYSCTIRMPSSEFARIA-GISH 524
+E LGIPE EYSC ++MPS EFARI +SH
Sbjct: 123 VEQLGIPEQEYSCVVKMPSGEFARICRDLSH 153
Score = 100 bits (239), Expect = 5e-20
Identities = 46/85 (54%), Positives = 62/85 (72%)
Frame = +2
Query: 509 CRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXXTLTF 688
CRDLS G+++VISC K+GVKFSA+G++G+ N+KL+QT+++DK LTF
Sbjct: 148 CRDLSHIGDAVVISCAKDGVKFSASGELGNGNIKLSQTSNVDKEEEAVTIEMNEPVQLTF 207
Query: 689 ACQYLNYFTKATSLSPQVQLSMSAE 763
A +YLN+FTKAT LS V LSMSA+
Sbjct: 208 ALRYLNFFTKATPLSSTVTLSMSAD 232
Score = 88.6 bits (210), Expect = 2e-16
Identities = 40/61 (65%), Positives = 52/61 (85%)
Frame = +1
Query: 70 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
MFEARL++ SILKKVLEA+KDL+ +A +D +G+ LQ+MD+SHVSLV LTLR++GFD Y
Sbjct: 1 MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTY 60
Query: 250 R 252
R
Sbjct: 61 R 61
>UniRef50_Q9ZW35 Cluster: Proliferating cell nuclear antigen 2;
n=60; Eukaryota|Rep: Proliferating cell nuclear antigen
2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 264
Score = 133 bits (322), Expect = 4e-30
Identities = 57/85 (67%), Positives = 73/85 (85%)
Frame = +3
Query: 255 DRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLD 434
DRN+SMGMNLG+MSK+LKCAG+ D +TIKA D +D VTF+FESP Q+K++D+EMKLM++D
Sbjct: 63 DRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMDID 122
Query: 435 LEHLGIPETEYSCTIRMPSSEFARI 509
EHLGIP+ EY +RMPS EF+RI
Sbjct: 123 SEHLGIPDAEYHSIVRMPSGEFSRI 147
Score = 88.6 bits (210), Expect = 2e-16
Identities = 42/85 (49%), Positives = 57/85 (67%)
Frame = +2
Query: 509 CRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXXTLTF 688
C+DLS G+++VIS TKEGVKFS GDIG+AN+ L Q ++DK +L+F
Sbjct: 148 CKDLSSIGDTVVISVTKEGVKFSTAGDIGTANIVLRQNTTVDKPEDAIVIEMNEPVSLSF 207
Query: 689 ACQYLNYFTKATSLSPQVQLSMSAE 763
A +Y+N FTKAT LS V +S+S+E
Sbjct: 208 ALRYMNSFTKATPLSETVTISLSSE 232
Score = 84.6 bits (200), Expect = 3e-15
Identities = 38/61 (62%), Positives = 48/61 (78%)
Frame = +1
Query: 70 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
M E RL++ S+LKKVLEA+KDL+ A FDC G LQAMD+SHV+LVSL LR++GF+ Y
Sbjct: 1 MLELRLVQGSLLKKVLEAVKDLVNDANFDCSTTGFSLQAMDSSHVALVSLLLRSEGFEHY 60
Query: 250 R 252
R
Sbjct: 61 R 61
>UniRef50_Q5K7Y2 Cluster: Proliferating cell nuclear antigen; n=1;
Filobasidiella neoformans|Rep: Proliferating cell
nuclear antigen - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 343
Score = 118 bits (284), Expect = 2e-25
Identities = 50/85 (58%), Positives = 69/85 (81%)
Frame = +3
Query: 255 DRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLD 434
DRN+ +G+NL S++KILKCA D D VT+KA D+AD + +FESP +++V +YEMKLM++D
Sbjct: 63 DRNMPLGVNLASLTKILKCAKDTDVVTLKASDDADALNLIFESPKEDRVGEYEMKLMDID 122
Query: 435 LEHLGIPETEYSCTIRMPSSEFARI 509
EHLGIP+T+Y T+ M S+EFARI
Sbjct: 123 QEHLGIPDTQYDATVSMSSAEFARI 147
Score = 75.8 bits (178), Expect = 1e-12
Identities = 33/61 (54%), Positives = 47/61 (77%)
Frame = +1
Query: 70 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
M EAR+ ++ +LKK+L+AIK+L++ DC + GI LQAMDNSH++LV+L L A FD+Y
Sbjct: 1 MLEARVKQAVVLKKLLDAIKELVSDGNLDCTEEGISLQAMDNSHIALVALKLEASEFDEY 60
Query: 250 R 252
R
Sbjct: 61 R 61
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/43 (53%), Positives = 30/43 (69%)
Frame = +2
Query: 509 CRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDK 637
CRDL+ GES+ I C+KEGV FSA G++G +V L Q A D+
Sbjct: 148 CRDLAVLGESVKIECSKEGVTFSADGEVGKGSVLLRQNAGQDR 190
>UniRef50_Q9VIT0 Cluster: CG10262-PA; n=3; Sophophora|Rep:
CG10262-PA - Drosophila melanogaster (Fruit fly)
Length = 255
Score = 109 bits (263), Expect = 6e-23
Identities = 46/85 (54%), Positives = 66/85 (77%)
Frame = +3
Query: 255 DRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLD 434
DRN+S+G++L S+ K+LKCA D VTIKA D + +T FES +E+ +DYE+KL+NLD
Sbjct: 63 DRNVSLGLDLKSLGKVLKCANSDDAVTIKAVDRPEKITLSFESDGKERTADYELKLLNLD 122
Query: 435 LEHLGIPETEYSCTIRMPSSEFARI 509
+H+ IP+ +Y+C I++PSSEFARI
Sbjct: 123 QDHMEIPKKDYTCFIQLPSSEFARI 147
Score = 79.4 bits (187), Expect = 1e-13
Identities = 32/60 (53%), Positives = 51/60 (85%)
Frame = +1
Query: 70 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
M EARL ++ +LKK+++A+K+++ Q T DC +NG++LQ+MDNSHVSLV+L+L +D F+K+
Sbjct: 1 MLEARLSQTLLLKKIVDALKEIIAQGTLDCSENGLELQSMDNSHVSLVALSLASDCFEKF 60
Score = 70.5 bits (165), Expect = 5e-11
Identities = 35/85 (41%), Positives = 55/85 (64%)
Frame = +2
Query: 509 CRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXXTLTF 688
CRD+S F ES+ I+C+ +G++F A GD+G+AN++L+ ++D T +F
Sbjct: 148 CRDMSMFDESLTIACSSKGIRFLAKGDLGTANIQLSAGTAMD-----VSIEVQEPVTQSF 202
Query: 689 ACQYLNYFTKATSLSPQVQLSMSAE 763
A +YLN FTKAT L+ +V+L +S E
Sbjct: 203 AGRYLNTFTKATPLADRVKLYLSDE 227
>UniRef50_A6RIU4 Cluster: Proliferating cell nuclear antigen; n=2;
Sclerotiniaceae|Rep: Proliferating cell nuclear antigen
- Botryotinia fuckeliana B05.10
Length = 259
Score = 106 bits (254), Expect = 8e-22
Identities = 45/85 (52%), Positives = 68/85 (80%)
Frame = +3
Query: 255 DRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLD 434
DRN+++G+NL S++K+L+ A ++D +TIKA+D D + VFES +++S+Y++KLM++D
Sbjct: 63 DRNVALGVNLTSLTKVLRAAQNEDILTIKAEDAPDVLNLVFESSESDRLSEYDLKLMDID 122
Query: 435 LEHLGIPETEYSCTIRMPSSEFARI 509
EHLGIP+TEY+ I MPSSEF RI
Sbjct: 123 QEHLGIPDTEYAAVINMPSSEFKRI 147
Score = 85.0 bits (201), Expect = 2e-15
Identities = 38/61 (62%), Positives = 50/61 (81%)
Frame = +1
Query: 70 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
M EARL ++ +LKKV++AIKDL+ FDC+D+GI LQAMDNSHV+LVS+ L+A+GF Y
Sbjct: 1 MLEARLEQADLLKKVVDAIKDLVQDCNFDCNDSGIALQAMDNSHVALVSMMLKAEGFSPY 60
Query: 250 R 252
R
Sbjct: 61 R 61
Score = 63.7 bits (148), Expect = 5e-09
Identities = 34/85 (40%), Positives = 46/85 (54%)
Frame = +2
Query: 509 CRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXXTLTF 688
C DL ES+ I +K+GVKFS GDIG+ V L +++DK +LTF
Sbjct: 148 CVDLMALSESVSIEASKDGVKFSCAGDIGNGAVTLRSHSNVDKPDLNVDIELTEPVSLTF 207
Query: 689 ACQYLNYFTKATSLSPQVQLSMSAE 763
+ +YL F KA LS V+L +S E
Sbjct: 208 SLKYLVNFCKAAGLSKSVKLCLSNE 232
>UniRef50_Q8X1W1 Cluster: Proliferating cell nuclear antigen; n=1;
Coprinopsis cinerea|Rep: Proliferating cell nuclear
antigen - Coprinus cinereus (Inky cap fungus)
(Hormographiella aspergillata)
Length = 368
Score = 104 bits (249), Expect = 3e-21
Identities = 44/85 (51%), Positives = 64/85 (75%)
Frame = +3
Query: 255 DRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLD 434
DR + +G+NLGS++K+LKCA D D T+KA D AD + ++E+ N +++++YEMKLM +D
Sbjct: 63 DRPMPLGVNLGSLTKVLKCAKDDDICTLKAADEADVLNLIYEAKNSDRIAEYEMKLMEID 122
Query: 435 LEHLGIPETEYSCTIRMPSSEFARI 509
+ L IP+TEY + MPSSEFARI
Sbjct: 123 ADALTIPDTEYEARVTMPSSEFARI 147
Score = 77.8 bits (183), Expect = 3e-13
Identities = 33/61 (54%), Positives = 48/61 (78%)
Frame = +1
Query: 70 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
M EA+L + +LKK+L+AIK+L+T A F+C++ GI LQAMDNSHV+LV++ + GF +Y
Sbjct: 1 MLEAKLAEAGLLKKLLDAIKELVTDANFECNEEGINLQAMDNSHVALVAVKILVSGFKRY 60
Query: 250 R 252
R
Sbjct: 61 R 61
Score = 44.8 bits (101), Expect = 0.003
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +2
Query: 512 RDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQT 622
RDLSQ GES+ I +KEGV+F+A G+ + NV L QT
Sbjct: 149 RDLSQLGESVRIEVSKEGVRFAAEGESANGNVLLRQT 185
Score = 33.5 bits (73), Expect = 6.5
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +2
Query: 677 TLTFACQYLNYFTKATSLSPQVQLSMS 757
+LTF+ +YL F K+TSLS +VQL MS
Sbjct: 315 SLTFSLKYLVNFAKSTSLSAKVQLMMS 341
>UniRef50_Q4P3B0 Cluster: Proliferating cell nuclear antigen; n=1;
Ustilago maydis|Rep: Proliferating cell nuclear antigen
- Ustilago maydis (Smut fungus)
Length = 289
Score = 96.3 bits (229), Expect = 8e-19
Identities = 40/85 (47%), Positives = 60/85 (70%)
Frame = +3
Query: 255 DRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLD 434
DR +S+G++L S+ KILK A + D + +K D+ D + FESP ++V ++EMKLM++D
Sbjct: 63 DRPMSIGVSLSSLGKILKSANNDDVLALKKSDDGDTLQMTFESPKSDRVGEFEMKLMDID 122
Query: 435 LEHLGIPETEYSCTIRMPSSEFARI 509
EHLGIP+T+Y ++M S EF RI
Sbjct: 123 SEHLGIPDTQYDAVVKMSSGEFGRI 147
Score = 77.4 bits (182), Expect = 4e-13
Identities = 33/61 (54%), Positives = 50/61 (81%)
Frame = +1
Query: 70 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
M EARL + +LKKVL+A+++L+T A F+C ++GI+LQAMDNSHV+L ++ LR D F+++
Sbjct: 1 MLEARLPEAVLLKKVLDAVRELITDANFECSEDGIRLQAMDNSHVALSAIELRTDCFEEF 60
Query: 250 R 252
R
Sbjct: 61 R 61
Score = 47.2 bits (107), Expect = 5e-04
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +2
Query: 509 CRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQ 619
CRDL+ GES+ I +KEGV FSA G+IG+A + L Q
Sbjct: 148 CRDLANIGESVKIEVSKEGVSFSAEGEIGAARMTLKQ 184
>UniRef50_P11038 Cluster: Probable DNA polymerase sliding clamp;
n=4; Nucleopolyhedrovirus|Rep: Probable DNA polymerase
sliding clamp - Autographa californica nuclear
polyhedrosis virus (AcMNPV)
Length = 256
Score = 89.4 bits (212), Expect = 9e-17
Identities = 36/85 (42%), Positives = 61/85 (71%)
Frame = +3
Query: 255 DRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLD 434
DRN+ + +++ S+SKI+KC ++ +V +KA+D D + FVF + N ++ Y +KLM +D
Sbjct: 63 DRNVPLNVSINSLSKIVKCVNERSSVLMKAEDQGDVMAFVFNNDN--RICTYTLKLMCID 120
Query: 435 LEHLGIPETEYSCTIRMPSSEFARI 509
+EHLGIP+++Y C + M S EFA++
Sbjct: 121 VEHLGIPDSDYDCVVHMSSVEFAQV 145
Score = 81.0 bits (191), Expect = 3e-14
Identities = 35/61 (57%), Positives = 45/61 (73%)
Frame = +1
Query: 70 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
MFEA ++LK+++E KDLL ATFDCD+ G+ +Q MD SHV+LVSL L A+GF KY
Sbjct: 1 MFEAEFKTGAVLKRLVETFKDLLPHATFDCDNRGVSMQVMDTSHVALVSLQLHAEGFKKY 60
Query: 250 R 252
R
Sbjct: 61 R 61
Score = 62.9 bits (146), Expect = 9e-09
Identities = 34/85 (40%), Positives = 50/85 (58%)
Frame = +2
Query: 509 CRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXXTLTF 688
C+D++QF +++SC+K+G++F A GDIGSA+V++ S D T TF
Sbjct: 146 CKDMTQFDHDIIVSCSKKGLQFRANGDIGSADVQM----SADN-ENFSVLKAKQTVTHTF 200
Query: 689 ACQYLNYFTKATSLSPQVQLSMSAE 763
A YL +F KA L+P V + MS E
Sbjct: 201 AGDYLCHFAKAAPLAPTVTIYMSEE 225
>UniRef50_O02115 Cluster: Proliferating cell nuclear antigen; n=6;
Eukaryota|Rep: Proliferating cell nuclear antigen -
Caenorhabditis elegans
Length = 229
Score = 87.4 bits (207), Expect = 4e-16
Identities = 36/85 (42%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 DRNISMGMNLGSMSKILKCAGDKDTVTIKAQDN-ADNVTFVFESPNQEKVSDYEMKLMNL 431
DR I++G++L +MSK LKCA + DT +K ++N D++ F F P ++K D +K+M++
Sbjct: 29 DRTINLGLSLANMSKALKCANNDDTCMLKYEENEGDSIIFTFADPKRDKTQDVTVKMMDI 88
Query: 432 DLEHLGIPETEYSCTIRMPSSEFAR 506
D EHLGIP+ +Y+ MP+ EF +
Sbjct: 89 DSEHLGIPDQDYAVVCEMPAGEFQK 113
Score = 65.7 bits (153), Expect = 1e-09
Identities = 31/82 (37%), Positives = 50/82 (60%)
Frame = +2
Query: 509 CRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXXTLTF 688
C+DLS F +S+ I+ TK G+ F+ GDIGS+ V + +++ D + F
Sbjct: 115 CKDLSTFSDSLNITATKAGIVFTGKGDIGSSVVTYSPSSNTDDETEAVTLEVKDPVNVNF 174
Query: 689 ACQYLNYFTKATSLSPQVQLSM 754
+ +Y+N FTKAT+LS +V+LS+
Sbjct: 175 SIKYMNQFTKATALSDRVRLSL 196
Score = 36.3 bits (80), Expect = 0.92
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +1
Query: 172 IQLQAMDNSHVSLVSLTLRADGFDKYR 252
+ LQAMD+SHV+LVSL L FD YR
Sbjct: 1 MSLQAMDSSHVALVSLKLEVGLFDTYR 27
>UniRef50_A0BN24 Cluster: Proliferating cell nuclear antigen; n=4;
Paramecium tetraurelia|Rep: Proliferating cell nuclear
antigen - Paramecium tetraurelia
Length = 259
Score = 86.6 bits (205), Expect = 7e-16
Identities = 35/86 (40%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 DRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADN-VTFVFESPNQEKVSDYEMKLMNL 431
+++++MG+++ ++ KILKC+G+ D +T++ Q+ ++F FES N ++S++++ LM+L
Sbjct: 63 EKSLTMGLSIENLQKILKCSGNDDQITLRTQEEEPTTLSFTFESKN--RISEFQLNLMSL 120
Query: 432 DLEHLGIPETEYSCTIRMPSSEFARI 509
D E LG+P+T+YS I+MPS+EF +I
Sbjct: 121 DQEQLGVPDTDYSSVIKMPSNEFTKI 146
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/61 (49%), Positives = 40/61 (65%)
Frame = +1
Query: 70 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
MFEA+ + KK++EAIK+L+ + + GI LQAMD SHV+LV+L L GF KY
Sbjct: 1 MFEAKFEDGVLFKKIVEAIKELVKNVNLEANGTGISLQAMDTSHVALVALQLNEKGFKKY 60
Query: 250 R 252
R
Sbjct: 61 R 61
Score = 60.9 bits (141), Expect = 4e-08
Identities = 32/85 (37%), Positives = 44/85 (51%)
Frame = +2
Query: 509 CRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXXTLTF 688
CR+L E++ I +K+G+KF GDIG V + +K L+F
Sbjct: 147 CRELGNINEAIGIETSKDGIKFYVKGDIGEGQVSVKSNDG-EKKEERVECDVDEPVNLSF 205
Query: 689 ACQYLNYFTKATSLSPQVQLSMSAE 763
A +Y N F KA +LSPQV LSMS +
Sbjct: 206 AVRYFNLFNKAAALSPQVILSMSQD 230
>UniRef50_Q8GZE5 Cluster: Proliferating cell nuclear antigen; n=16;
Dinophyceae|Rep: Proliferating cell nuclear antigen -
Pyrocystis lunula (Dinoflagellate)
Length = 259
Score = 85.4 bits (202), Expect = 2e-15
Identities = 36/85 (42%), Positives = 61/85 (71%)
Frame = +3
Query: 255 DRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLD 434
DR S+GMN+ S++KILK G D++ ++ + +AD V+F ES +++++D+E+KLM ++
Sbjct: 64 DRPTSLGMNVDSLAKILKMCGTSDSLKLRWRGDADMVSFQCESGEEDRIADFELKLMQIE 123
Query: 435 LEHLGIPETEYSCTIRMPSSEFARI 509
EH+ IPE Y + ++PSSEF +I
Sbjct: 124 SEHMEIPEQHYKVSAKLPSSEFQKI 148
Score = 69.7 bits (163), Expect = 8e-11
Identities = 31/59 (52%), Positives = 44/59 (74%)
Frame = +1
Query: 76 EARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYR 252
EA L ++ +LKKV++AIKDL FDC + G+Q+Q+MD+SHV+LVSL LR F ++R
Sbjct: 4 EAHLQQAVLLKKVVDAIKDLCKDVNFDCSEKGLQVQSMDSSHVALVSLLLRESAFAEFR 62
Score = 64.1 bits (149), Expect = 4e-09
Identities = 33/85 (38%), Positives = 46/85 (54%)
Frame = +2
Query: 509 CRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXXTLTF 688
CRDL +FGE+M + +KEG+ FS GD+G+ NV L + +K T TF
Sbjct: 149 CRDLKEFGETMQVKASKEGITFSVQGDMGAGNVML-KPREAEKPEDKVTLSVHEPVTATF 207
Query: 689 ACQYLNYFTKATSLSPQVQLSMSAE 763
A +YL F KA LS V+L + +
Sbjct: 208 ALRYLVNFAKAAPLSGTVELGLGPD 232
>UniRef50_P15873 Cluster: Proliferating cell nuclear antigen; n=11;
Saccharomycetales|Rep: Proliferating cell nuclear
antigen - Saccharomyces cerevisiae (Baker's yeast)
Length = 258
Score = 84.2 bits (199), Expect = 4e-15
Identities = 33/85 (38%), Positives = 61/85 (71%)
Frame = +3
Query: 255 DRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLD 434
D +++GM+L S+SKIL+C + DT+T+ A + D++ +FE ++++++Y +KLM++D
Sbjct: 63 DHPVTLGMDLTSLSKILRCGNNTDTLTLIADNTPDSIILLFEDTKKDRIAEYSLKLMDID 122
Query: 435 LEHLGIPETEYSCTIRMPSSEFARI 509
+ L I E +Y T+ +PSSEF++I
Sbjct: 123 ADFLKIEELQYDSTLSLPSSEFSKI 147
Score = 54.4 bits (125), Expect = 3e-06
Identities = 31/84 (36%), Positives = 44/84 (52%)
Frame = +2
Query: 512 RDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXXTLTFA 691
RDLSQ +S+ I TKE +KF A GDIGS +V + ++ LTF
Sbjct: 149 RDLSQLSDSINIMITKETIKFVADGDIGSGSVIIKPFVDMEHPETSIKLEMDQPVDLTFG 208
Query: 692 CQYLNYFTKATSLSPQVQLSMSAE 763
+YL K +SLS +V + +S+E
Sbjct: 209 AKYLLDIIKGSSLSDRVGIRLSSE 232
Score = 54.0 bits (124), Expect = 4e-06
Identities = 23/61 (37%), Positives = 38/61 (62%)
Frame = +1
Query: 70 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
M EA+ +S+ K++++ KD + F C ++GI QA+D+S V LVSL + + F +Y
Sbjct: 1 MLEAKFEEASLFKRIIDGFKDCVQLVNFQCKEDGIIAQAVDDSRVLLVSLEIGVEAFQEY 60
Query: 250 R 252
R
Sbjct: 61 R 61
>UniRef50_Q5CW01 Cluster: Proliferating cell nuclear antigen PCNA;
n=2; Cryptosporidium|Rep: Proliferating cell nuclear
antigen PCNA - Cryptosporidium parvum Iowa II
Length = 262
Score = 82.2 bits (194), Expect = 1e-14
Identities = 32/85 (37%), Positives = 62/85 (72%)
Frame = +3
Query: 255 DRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLD 434
D+N ++G+N ++ K+LK + D V ++ D+++++ F+FE+PN ++VS++E+ L+++D
Sbjct: 63 DKNRTLGLNTQNVVKLLKLCSNDDQVLLRHDDDSESLIFIFETPNGDRVSEFELTLISID 122
Query: 435 LEHLGIPETEYSCTIRMPSSEFARI 509
+ L IPET +S + MPS+EF R+
Sbjct: 123 QDSLQIPETSFSSVVTMPSNEFQRL 147
Score = 72.9 bits (171), Expect = 9e-12
Identities = 32/61 (52%), Positives = 45/61 (73%)
Frame = +1
Query: 70 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
MFEARL IL+KV EAI +L++ +C+++G+ +QAMDNSHVSLV L L+ F++Y
Sbjct: 1 MFEARLSNGGILRKVFEAITNLVSDVNLECNESGVTIQAMDNSHVSLVGLYLKDTAFERY 60
Query: 250 R 252
R
Sbjct: 61 R 61
Score = 58.8 bits (136), Expect = 2e-07
Identities = 32/83 (38%), Positives = 44/83 (53%)
Frame = +2
Query: 509 CRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXXTLTF 688
CRD++QF +S+ I T + V+FS G +GS ++ L D L F
Sbjct: 148 CRDMAQFSDSLSIDVTSKNVRFSTKGSLGSGSIILRPKEGADS--EAVALDVSEPCQLVF 205
Query: 689 ACQYLNYFTKATSLSPQVQLSMS 757
+ +YLN F KAT LS V+LSMS
Sbjct: 206 SLRYLNNFAKATPLSNSVKLSMS 228
>UniRef50_Q4QF35 Cluster: Proliferating cell nuclear antigen; n=6;
Trypanosomatidae|Rep: Proliferating cell nuclear antigen
- Leishmania major
Length = 293
Score = 82.2 bits (194), Expect = 1e-14
Identities = 33/85 (38%), Positives = 60/85 (70%)
Frame = +3
Query: 255 DRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLD 434
+RNI +G+NL S+SK+LK D+++++ D++D VT E+P + + +Y++KL+ ++
Sbjct: 63 ERNIILGLNLASLSKVLKIVDGNDSLSLRHDDDSDVVTLTSENPEKTRKCEYQLKLLEIE 122
Query: 435 LEHLGIPETEYSCTIRMPSSEFARI 509
E +GIPE +Y T+ + S+EFA+I
Sbjct: 123 AESMGIPEMDYRSTVTLNSAEFAKI 147
Score = 63.7 bits (148), Expect = 5e-09
Identities = 28/61 (45%), Positives = 44/61 (72%)
Frame = +1
Query: 70 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
M EA++ +S+ K+++E I L+ +A FDC+ G+ +QAMD+SHV+LV + LR D F KY
Sbjct: 1 MLEAQVQYASLWKRLVECINGLVNEANFDCNPGGLSIQAMDSSHVALVHMLLRDDCFVKY 60
Query: 250 R 252
+
Sbjct: 61 Q 61
Score = 40.7 bits (91), Expect = 0.043
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +2
Query: 512 RDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDK 637
RD+ FG+++ I+ +KEGVKFS++GD+G L D+
Sbjct: 149 RDMQVFGDTVTIAISKEGVKFSSSGDVGQGYTFLQAAGVSDR 190
>UniRef50_A5Z0S2 Cluster: Proliferating cell nuclear antigen 2; n=1;
Phaseolus coccineus|Rep: Proliferating cell nuclear
antigen 2 - Phaseolus coccineus (Scarlet runner bean)
Length = 271
Score = 79.8 bits (188), Expect = 8e-14
Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Frame = +3
Query: 255 DRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLD 434
D N SMGMNL SM ++L A D +TIKA D D VTF FESP Q ++S++EM+L+++D
Sbjct: 62 DHNFSMGMNLYSMVELLNRANGDDIITIKADDGGDTVTFTFESPRQNQISNFEMRLVDID 121
Query: 435 LEHLGIPE-----TEYSCTIRMPSSEF 500
I E EY ++MPSS F
Sbjct: 122 SPRYWIREDEAKYMEYLAMVKMPSSIF 148
Score = 56.8 bits (131), Expect = 6e-07
Identities = 27/61 (44%), Positives = 40/61 (65%)
Frame = +1
Query: 70 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
M E R ++ S+LKKV E IK+ + F C GI +QAM NS++S+++L L + GF+ Y
Sbjct: 1 MLEVRFVQGSLLKKVSEIIKEFIHDTNFYCSSTGIIVQAM-NSNLSILALVLHSSGFEHY 59
Query: 250 R 252
R
Sbjct: 60 R 60
>UniRef50_A2DQV2 Cluster: Proliferating cell nuclear antigen,
putative; n=1; Trichomonas vaginalis G3|Rep:
Proliferating cell nuclear antigen, putative -
Trichomonas vaginalis G3
Length = 263
Score = 74.9 bits (176), Expect = 2e-12
Identities = 31/84 (36%), Positives = 55/84 (65%)
Frame = +3
Query: 258 RNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDL 437
+N S+G+NLG++ KILKC + D +T++ ++ + F FE+ + ++ +++M LM++
Sbjct: 64 QNTSLGVNLGAIQKILKCGDNNDVLTLETNEDQSCLKFKFENSSSDRYFEFQMNLMDISS 123
Query: 438 EHLGIPETEYSCTIRMPSSEFARI 509
EHL IP+ E TI + SEF +I
Sbjct: 124 EHLSIPDAEPEATITLGCSEFQKI 147
Score = 71.7 bits (168), Expect = 2e-11
Identities = 30/60 (50%), Positives = 44/60 (73%)
Frame = +1
Query: 70 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
M E RL LKK+L+A++DL+ +A +C + G+ LQAMD +HV+LVS+ L A+GF+KY
Sbjct: 1 MVECRLTNPGNLKKILDALRDLVEEANIECSETGLSLQAMDTAHVALVSMNLNANGFEKY 60
Score = 52.8 bits (121), Expect = 1e-05
Identities = 29/83 (34%), Positives = 42/83 (50%)
Frame = +2
Query: 509 CRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXXTLTF 688
CRDL+QFG+++ I+ K V F+ G + + + S K L+F
Sbjct: 148 CRDLAQFGDTVKITVEKSRVSFAVAGTNTNCCLNYSNFESAGKDGSQVTIQCEDKIELSF 207
Query: 689 ACQYLNYFTKATSLSPQVQLSMS 757
A +YLN FTKA LS V+L +S
Sbjct: 208 ALRYLNLFTKAAPLSENVKLCLS 230
>UniRef50_Q5CJE0 Cluster: Proliferating cell nuclear antigen; n=2;
Cryptosporidium|Rep: Proliferating cell nuclear antigen
- Cryptosporidium hominis
Length = 261
Score = 74.1 bits (174), Expect = 4e-12
Identities = 32/61 (52%), Positives = 44/61 (72%)
Frame = +1
Query: 70 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
MFEARL + + KK+ EA+K+L DCD +G+ LQAMD+SHV+LVSL ++ D F+ Y
Sbjct: 1 MFEARLQNAMLFKKIAEALKELCHDINIDCDSDGLHLQAMDSSHVALVSLNIQPDAFEHY 60
Query: 250 R 252
R
Sbjct: 61 R 61
Score = 62.1 bits (144), Expect = 2e-08
Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 5/90 (5%)
Frame = +3
Query: 255 DRNISMGMNLGSMSKILKCAGDKDT-VTIKA-QDNADN-VTFVFESPNQEKVSDYE--MK 419
DR + +G+++ +SK +K DKDT +T+K DN DN +T FE N +S E ++
Sbjct: 63 DRPVVLGLDMQQLSKFMKFC-DKDTSMTLKKYDDNEDNRITMCFED-NSGILSSKECILR 120
Query: 420 LMNLDLEHLGIPETEYSCTIRMPSSEFARI 509
LM+++ EH+ IPE EY C + MPS+ F I
Sbjct: 121 LMDIEQEHISIPEEEYECNVTMPSNLFQSI 150
Score = 40.7 bits (91), Expect = 0.043
Identities = 24/82 (29%), Positives = 40/82 (48%)
Frame = +2
Query: 512 RDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXXTLTFA 691
RD+S G+ + + + + +KF GD G ++ S D + +A
Sbjct: 152 RDMSGIGDEVSLEISGKYIKFCVDGDDGKIDLNFPLNDSPD-ITKAVQIHADDTISQKYA 210
Query: 692 CQYLNYFTKATSLSPQVQLSMS 757
+YL+YFTKA+ LS V +S+S
Sbjct: 211 LRYLSYFTKASPLSTTVNISIS 232
>UniRef50_P61074 Cluster: Proliferating cell nuclear antigen; n=8;
Aconoidasida|Rep: Proliferating cell nuclear antigen -
Plasmodium falciparum (isolate 3D7)
Length = 274
Score = 72.1 bits (169), Expect = 2e-11
Identities = 30/87 (34%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Frame = +3
Query: 255 DRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLD 434
DR +G+N+ S++K+ K G ++V I ++D+ DN+ FVFE+ ++KV+++ +KLM+++
Sbjct: 63 DRERVLGVNIASLNKVFKLCGANESVVISSKDDEDNLNFVFENNKEDKVTNFSLKLMSIE 122
Query: 435 LEHLGIPETE--YSCTIRMPSSEFARI 509
L+ L IP+ E + + + S E I
Sbjct: 123 LDSLNIPDCEEGFDAEVELSSKELTNI 149
Score = 71.7 bits (168), Expect = 2e-11
Identities = 34/61 (55%), Positives = 44/61 (72%)
Frame = +1
Query: 70 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
M EA+L +SILKK+ E IKDL+ A D D++G++LQA+D +HVSLVSL L GF Y
Sbjct: 1 MLEAKLNNASILKKLFECIKDLVNDANVDADESGLKLQALDGNHVSLVSLHLLDSGFSHY 60
Query: 250 R 252
R
Sbjct: 61 R 61
Score = 42.7 bits (96), Expect = 0.011
Identities = 24/82 (29%), Positives = 39/82 (47%)
Frame = +2
Query: 512 RDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXXTLTFA 691
R+LS+F +++ I +KF+ G +G A V L S + +FA
Sbjct: 151 RNLSEFSDTVFIEIDSNCIKFTTKGIVGDAEVALKPRDSTSEDDIGVTIKSKKKIKQSFA 210
Query: 692 CQYLNYFTKATSLSPQVQLSMS 757
+YLN F+K+ L+ V L +S
Sbjct: 211 IKYLNLFSKSNILADVVVLGLS 232
>UniRef50_Q98SC0 Cluster: Proliferating cell nuclear antigen; n=1;
Guillardia theta|Rep: Proliferating cell nuclear antigen
- Guillardia theta (Cryptomonas phi)
Length = 258
Score = 71.3 bits (167), Expect = 3e-11
Identities = 31/81 (38%), Positives = 56/81 (69%)
Frame = +3
Query: 267 SMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHL 446
S+G+NL KILKCA ++D+V I ++N + +TF+F + E+ S+++++L+ ++ E L
Sbjct: 67 SLGINLNWFYKILKCATNEDSVEIIYKNNENFITFLFRNEANERSSEFQLRLLEINNETL 126
Query: 447 GIPETEYSCTIRMPSSEFARI 509
GIPET YS + + + E+ R+
Sbjct: 127 GIPETIYSAVVTLTAVEYKRV 147
Score = 64.5 bits (150), Expect = 3e-09
Identities = 28/61 (45%), Positives = 46/61 (75%)
Frame = +1
Query: 70 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
M A+L +S+LKK+++A+KDL++ A + ++G+ LQAMD+SHVSLVSL + + F+ Y
Sbjct: 1 MLRAKLSSNSLLKKIVDAVKDLISDANIEFTNSGLSLQAMDSSHVSLVSLIIPPEEFEVY 60
Query: 250 R 252
+
Sbjct: 61 Q 61
>UniRef50_Q9NGR7 Cluster: Proliferating cell nuclear antigen 1; n=1;
Toxoplasma gondii|Rep: Proliferating cell nuclear
antigen 1 - Toxoplasma gondii
Length = 316
Score = 71.3 bits (167), Expect = 3e-11
Identities = 33/90 (36%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Frame = +3
Query: 255 DRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLD 434
DR +G+NL S+ K+ K + D+ +I+ ++++D VTFVFE+ EK+S + ++LM +D
Sbjct: 63 DRERLLGLNLASVCKVFKLCSNADSCSIQNEEDSDTVTFVFENEADEKLSSFSLRLMAID 122
Query: 435 LEHLGIP--ETEYSCTIRMPSSEFARIAGI 518
+ L +P ET + T+ M + EFA + I
Sbjct: 123 QDALRVPEDETAHDVTVTMSAREFANVVRI 152
Score = 68.5 bits (160), Expect = 2e-10
Identities = 29/61 (47%), Positives = 46/61 (75%)
Frame = +1
Query: 70 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
M EA+L +S+L+++ E+IKD+++ DCD+ G++LQAMD+SHV+LV+L L GF +
Sbjct: 1 MLEAKLQHASVLRRLFESIKDMVSDVNLDCDETGLRLQAMDSSHVALVALKLDDAGFVHF 60
Query: 250 R 252
R
Sbjct: 61 R 61
Score = 48.4 bits (110), Expect = 2e-04
Identities = 27/82 (32%), Positives = 39/82 (47%)
Frame = +2
Query: 512 RDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXXTLTFA 691
R + +F +S+ + K GVKF GD+G V L + T+A
Sbjct: 151 RIMGEFSDSVRVEVDKLGVKFVTQGDLGVGEVLLKPKPFANGDDSGVEIKVNSPVCQTYA 210
Query: 692 CQYLNYFTKATSLSPQVQLSMS 757
+YLNYF KA S+S V LS++
Sbjct: 211 VKYLNYFAKAASVSSSVTLSLT 232
>UniRef50_UPI000049949B Cluster: proliferating cell nuclear antigen;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: proliferating
cell nuclear antigen - Entamoeba histolytica HM-1:IMSS
Length = 262
Score = 67.3 bits (157), Expect = 4e-10
Identities = 27/60 (45%), Positives = 42/60 (70%)
Frame = +1
Query: 73 FEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYR 252
F A+ +++ K+V+E++K + + FDC D GI +Q MDNSHVSLVSL + D FD+++
Sbjct: 4 FHAKFKEAALFKRVVESLKSTIDKTNFDCSDAGIAVQCMDNSHVSLVSLLIETDAFDEFQ 63
Score = 44.8 bits (101), Expect = 0.003
Identities = 26/82 (31%), Positives = 42/82 (51%)
Frame = +3
Query: 264 ISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEH 443
I++G+NL +SKILK A D D I D+ S K + + L++++ E
Sbjct: 68 ITLGINLTHLSKILK-ALDNDCGLILDVKKVDDAVLSITSEGTNKTMKFGLNLVDIEAES 126
Query: 444 LGIPETEYSCTIRMPSSEFARI 509
+ IPE + I + S+EF +I
Sbjct: 127 VEIPELQSDAIITLSSAEFLKI 148
>UniRef50_Q8WSN0 Cluster: Proliferating cell nuclear antigen 2; n=7;
Plasmodium|Rep: Proliferating cell nuclear antigen 2 -
Plasmodium falciparum
Length = 264
Score = 64.9 bits (151), Expect = 2e-09
Identities = 29/61 (47%), Positives = 41/61 (67%)
Frame = +1
Query: 70 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
MFE R+ KK+ E +KD+ T+ +CD+NGI++Q+MD SHVSLV L + +D F Y
Sbjct: 1 MFECRI-DGQFFKKLFETLKDICTEVNLECDENGIKMQSMDCSHVSLVDLNIVSDFFQHY 59
Query: 250 R 252
R
Sbjct: 60 R 60
Score = 53.2 bits (122), Expect = 7e-06
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Frame = +3
Query: 255 DRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTF---VFESPNQEKVSD---YEM 416
D+N +G+++ M KIL +K TV + +DN ++ + + Q D ++
Sbjct: 62 DKNCVLGISINFMLKILSVIKEKSTVFLFKEDNENDAVLNIGIIDEEEQSSADDSLEIQV 121
Query: 417 KLMNLDLEHLGIPETEYSCTIRMPSSEFARIAGISHSL 530
KL+N EHL IP++EY C M S +F +S+
Sbjct: 122 KLINAQKEHLEIPQSEYHCQCTMKSKKFQEFTKYLNSI 159
>UniRef50_A7AVH8 Cluster: Proliferating cell nuclear antigen 1; n=1;
Babesia bovis|Rep: Proliferating cell nuclear antigen 1
- Babesia bovis
Length = 277
Score = 62.9 bits (146), Expect = 9e-09
Identities = 31/87 (35%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Frame = +3
Query: 255 DRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLD 434
DR ++G+NL S++K K + D+V I++++ D ++F+FE+ ++V + +KLM+++
Sbjct: 63 DRPRALGINLNSVTKAFKSCSNHDSVLIQSEEEKDYISFIFENNVDDRVMSFSLKLMSIE 122
Query: 435 LEHLGIPE-TE-YSCTIRMPSSEFARI 509
+ L IPE TE Y I + S E A I
Sbjct: 123 QDALSIPENTEGYDAEITLGSKELANI 149
Score = 54.8 bits (126), Expect = 2e-06
Identities = 22/61 (36%), Positives = 38/61 (62%)
Frame = +1
Query: 70 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
M E +L + +L+++ + ++D+++ D D G+ LQA+D +HV+LV L L GF Y
Sbjct: 1 MLELKLNHAVVLRRIFDCMRDIISDGNIDFDATGMSLQALDGNHVALVHLKLHESGFSLY 60
Query: 250 R 252
R
Sbjct: 61 R 61
>UniRef50_A7AUH5 Cluster: Proliferating cell nuclear antigen; n=3;
Piroplasmida|Rep: Proliferating cell nuclear antigen -
Babesia bovis
Length = 264
Score = 60.5 bits (140), Expect = 5e-08
Identities = 26/61 (42%), Positives = 40/61 (65%)
Frame = +1
Query: 70 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
MFE RL L+++ EA++++ + DC ++G+ +QAMDNSH+SL+ L L D F Y
Sbjct: 1 MFECRL-DGMFLRRLFEALREICNDVSIDCSEDGLSMQAMDNSHISLIHLCLAPDFFQLY 59
Query: 250 R 252
R
Sbjct: 60 R 60
Score = 49.6 bits (113), Expect = 9e-05
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Frame = +3
Query: 255 DRNISMGMNLGSMSKILKCAGDKDTVTI-KAQDNADNVTFV--FESPNQEKVS----DYE 413
D ++G+N+ M KIL +K + + + D+ D V FV E+ ++ + +
Sbjct: 62 DTPCTLGLNISFMLKILAVVREKSVIYLARGDDSEDPVLFVRIIEAGGYDEAESDALEAQ 121
Query: 414 MKLMNLDLEHLGIPETEYSCTIRMPSSEFARIAGISHSL 530
+K+++++ EHL IP+ EY+C M S F A HS+
Sbjct: 122 VKMIDVEREHLDIPDCEYTCKCVMNSRRFQEFAKYLHSI 160
Score = 35.5 bits (78), Expect = 1.6
Identities = 24/81 (29%), Positives = 40/81 (49%)
Frame = +2
Query: 518 LSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXXTLTFACQ 697
L G+++VIS K+ +K A GD +K ++T + FA +
Sbjct: 157 LHSIGDTVVISMNKDVIKLEAEGD----GIKASKT--FHDGVGDVRVMSTEPLSQMFATR 210
Query: 698 YLNYFTKATSLSPQVQLSMSA 760
YL F+KAT+L+ V +++SA
Sbjct: 211 YLVLFSKATALAQDVSINLSA 231
>UniRef50_A2F7D4 Cluster: Proliferating cell nuclear antigen,
putative; n=1; Trichomonas vaginalis G3|Rep:
Proliferating cell nuclear antigen, putative -
Trichomonas vaginalis G3
Length = 264
Score = 57.6 bits (133), Expect = 3e-07
Identities = 26/60 (43%), Positives = 41/60 (68%)
Frame = +1
Query: 70 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
M E ++S KK+++++K L+ +F C +G+ LQAMD SHVSL+S++L AD F+ Y
Sbjct: 1 MVEIVFEQASFFKKIIDSLKGLVEDISFKCTSDGMDLQAMDISHVSLISISLPADIFNTY 60
>UniRef50_Q4A3A5 Cluster: Putative proliferating cell nuclear
antigen; n=1; Emiliania huxleyi virus 86|Rep: Putative
proliferating cell nuclear antigen - Emiliania huxleyi
virus 86
Length = 259
Score = 57.2 bits (132), Expect = 5e-07
Identities = 25/60 (41%), Positives = 41/60 (68%)
Frame = +1
Query: 70 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
MFE + + +L++V+E I +L+ + FDC +NG+ +QAMD++HV L ++ L DGF Y
Sbjct: 1 MFECKG-NAGLLRRVIECIAELIIECRFDCSENGMVVQAMDSTHVCLAAINLLRDGFLHY 59
Score = 50.8 bits (116), Expect = 4e-05
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +3
Query: 282 LGSMSKILKCAGDKDTVTIKAQDNADNVTFV-FESPNQEKVSDYEMKLMNLDLEHLGIPE 458
+ KIL C+G DT T++ N +V + FE+P ++++D+E+ L++++ + + +PE
Sbjct: 71 IDKFKKILACSGPDDTFTLRF--NGGSVLLIMFETPAHDRITDFELNLLDIEQDAMSVPE 128
Query: 459 TEYSCTIRMPSSEFARI 509
E I+M S + RI
Sbjct: 129 LEPHLHIQMNSIDLKRI 145
Score = 35.9 bits (79), Expect = 1.2
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 512 RDLSQFGESMVISCTKEGVKFSATGDIGSANV 607
+D FG+ + IS TK+GV +S GD G N+
Sbjct: 147 KDYQTFGDVITISGTKDGVTYSVNGDFGKGNI 178
>UniRef50_Q64803 Cluster: 20.6 kDa protein; n=1; Autographa
californica nucleopolyhedrovirus|Rep: 20.6 kDa protein -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 187
Score = 52.4 bits (120), Expect = 1e-05
Identities = 31/61 (50%), Positives = 35/61 (57%)
Frame = -1
Query: 248 YLSKPSARRVSDTRDT*ELSIACN*IPLSSQSKVACVSRSLIASKTFFKIELRSKRASNM 69
Y KPSA +DT T E+SI C P SQSKVAC SRSL S + FK ASN+
Sbjct: 13 YFLKPSACSCNDTSATCEVSITCMLTPRLSQSKVACGSRSLKVSTSLFKTAPVLNSASNI 72
Query: 68 F 66
F
Sbjct: 73 F 73
>UniRef50_O10308 Cluster: Probable DNA polymerase sliding clamp;
n=4; Nucleopolyhedrovirus|Rep: Probable DNA polymerase
sliding clamp - Orgyia pseudotsugata multicapsid
polyhedrosis virus (OpMNPV)
Length = 249
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/58 (39%), Positives = 37/58 (63%)
Frame = +1
Query: 76 EARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
EA ++ + ++ A++ LLT ATFDCD +G++L ++D V+L L LR GF +Y
Sbjct: 2 EATFATAAAFQSIVGALRGLLTHATFDCDAHGMRLHSLDVERVALADLRLRRAGFARY 59
Score = 46.4 bits (105), Expect = 9e-04
Identities = 21/84 (25%), Positives = 44/84 (52%)
Frame = +3
Query: 255 DRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLD 434
+R +S + + + KI++ A +T++ D V +E+ + + ++LD
Sbjct: 62 ERKLSFSVPVRGLVKIVRTADPSAPLTMRVAARDDRVRLAYETAR--RAVSCTLAQISLD 119
Query: 435 LEHLGIPETEYSCTIRMPSSEFAR 506
+ LG+P+ EY+C + +PS+E R
Sbjct: 120 ADRLGVPDKEYTCVLAVPSAELTR 143
>UniRef50_Q3LWE0 Cluster: Proliferating cell nuclear antigen; n=1;
Bigelowiella natans|Rep: Proliferating cell nuclear
antigen - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 258
Score = 50.8 bits (116), Expect = 4e-05
Identities = 19/53 (35%), Positives = 43/53 (81%), Gaps = 1/53 (1%)
Frame = +1
Query: 109 KVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYR-WIGT 264
K+ E++KDLL+++TF+ +N + +Q++D+SH++L+ + ++AD F+ ++ ++GT
Sbjct: 14 KLFESMKDLLSESTFEFKENFLTIQSIDHSHITLLEVDIQADYFENFKEFVGT 66
>UniRef50_Q6LWJ8 Cluster: DNA polymerase sliding clamp; n=8;
cellular organisms|Rep: DNA polymerase sliding clamp -
Methanococcus maripaludis
Length = 250
Score = 50.8 bits (116), Expect = 4e-05
Identities = 22/48 (45%), Positives = 34/48 (70%)
Frame = +1
Query: 106 KKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
KKV+ A +L+ + F+ D+NGI+ AMD SHV+LVS+ + D F++Y
Sbjct: 12 KKVINATSNLVDEICFEVDENGIKASAMDPSHVALVSMEMPKDVFEEY 59
>UniRef50_O27367 Cluster: DNA polymerase sliding clamp; n=3;
Methanobacteriaceae|Rep: DNA polymerase sliding clamp -
Methanobacterium thermoautotrophicum
Length = 244
Score = 46.8 bits (106), Expect = 6e-04
Identities = 21/60 (35%), Positives = 36/60 (60%)
Frame = +1
Query: 70 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
MF+A L +IL+ +AI ++ + G++L A+D SH++ V L L+A+ FD+Y
Sbjct: 1 MFKAELNDPNILRTSFDAISSIVDEVQIQLSAEGLRLDALDRSHITYVHLELKAELFDEY 60
>UniRef50_Q7QSA2 Cluster: Proliferating cell nuclear antigen; n=1;
Giardia lamblia ATCC 50803|Rep: Proliferating cell
nuclear antigen - Giardia lamblia ATCC 50803
Length = 299
Score = 46.4 bits (105), Expect = 9e-04
Identities = 24/106 (22%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = +3
Query: 189 GQLSCVSRVTHSPS*WL*QVPLDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDN-ADNV 365
G+++ +S H P+ + +R S+G+ S K++K + D VT+ + N +D +
Sbjct: 49 GRIALIS--LHLPTQFFKNFRCERACSLGVRTASFLKVIKFCSNDDLVTLSQRSNSSDQL 106
Query: 366 TFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSSEFA 503
+ ES + ++ ++L D + + + E+ T+ + S FA
Sbjct: 107 DILVESRKYSQTMNFSLRLFRSDADQIDVIRPEFDSTVSIDSGRFA 152
Score = 39.1 bits (87), Expect = 0.13
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +1
Query: 73 FEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYR 252
FE + LKK+ E + L+ D+G+ ++ +DN ++L+SL L F +R
Sbjct: 8 FELTFRDAGTLKKIFETLVPLVKDTPVSITDHGLSIETIDNGRIALISLHLPTQFFKNFR 67
>UniRef50_A7KA48 Cluster: Putative uncharacterized protein Z788R;
n=3; Chlorovirus|Rep: Putative uncharacterized protein
Z788R - Chlorella virus ATCV-1
Length = 292
Score = 46.0 bits (104), Expect = 0.001
Identities = 18/60 (30%), Positives = 38/60 (63%)
Frame = +1
Query: 70 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
+F R ++ S++K + + +K++L + +G+++ AMD + VSLV + L A+ F++Y
Sbjct: 36 LFCIRTVQGSVIKSLFDTLKEILHDVSITFSPSGVKISAMDGAKVSLVHMKLDAEAFEEY 95
>UniRef50_Q84513 Cluster: Probable DNA polymerase sliding clamp 1;
n=3; Chlorovirus|Rep: Probable DNA polymerase sliding
clamp 1 - Paramecium bursaria Chlorella virus 1 (PBCV-1)
Length = 262
Score = 46.0 bits (104), Expect = 0.001
Identities = 18/61 (29%), Positives = 37/61 (60%)
Frame = +1
Query: 70 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
+F R L+ +++K + + +K++L GI++ A+D + VSLV L L ++ F++Y
Sbjct: 7 LFHIRTLQGNVIKSLFDCLKEILHDVMLSFGPTGIRISALDGAKVSLVHLKLDSESFEEY 66
Query: 250 R 252
+
Sbjct: 67 K 67
Score = 43.2 bits (97), Expect = 0.008
Identities = 20/86 (23%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 DRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADN-VTFVFESPNQEKVSDYEMKLMNL 431
+ +G+N+ +M K+L+ AG D++ + N + + ++ + ++ + MKL+ +
Sbjct: 69 EHTYELGVNVLNMFKLLRSAGSHDSILFRYLKNDPHMIELTIQNFEKNSLTKFNMKLIEI 128
Query: 432 DLEHLGIPETEYSCTIRMPSSEFARI 509
D + + + E+ I MP++ F RI
Sbjct: 129 DSVEIEVGDIEFDTIIVMPANYFQRI 154
>UniRef50_Q9NGR6 Cluster: Proliferating cell nuclear antigen 2; n=1;
Toxoplasma gondii|Rep: Proliferating cell nuclear
antigen 2 - Toxoplasma gondii
Length = 272
Score = 45.6 bits (103), Expect = 0.002
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +1
Query: 118 EAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYR 252
E +K+++T C+ +GI L +MD SHV++V + L D F KYR
Sbjct: 1 ECLKEMVTDVNLVCNASGISLDSMDGSHVAVVDVRLAVDLFHKYR 45
>UniRef50_A0RXH7 Cluster: DNA polymerase sliding clamp subunit; n=2;
Thermoprotei|Rep: DNA polymerase sliding clamp subunit -
Cenarchaeum symbiosum
Length = 248
Score = 45.6 bits (103), Expect = 0.002
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = +1
Query: 73 FEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
F A+ S LK ++ AI L+ +ATF GI + MD SHV+L+ ++ F+KY
Sbjct: 3 FSAKTSGSDDLKAIISAISTLVEEATFVATAEGITFRGMDPSHVALIDISWPNSAFEKY 61
Score = 39.5 bits (88), Expect = 0.099
Identities = 21/87 (24%), Positives = 44/87 (50%)
Frame = +3
Query: 255 DRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLD 434
D NI G+ + +K++K A KD++TI + D++ + N++ Y+++L+
Sbjct: 64 DSNIKFGVRIDEFTKLIKRADKKDSITISV--SKDSMLLIDIGSNKK----YKIRLIESS 117
Query: 435 LEHLGIPETEYSCTIRMPSSEFARIAG 515
+P+ Y I + ++ F +I G
Sbjct: 118 ATDTPLPKISYDAKIELATTSFEKILG 144
>UniRef50_Q8SRV9 Cluster: Proliferating cell nuclear antigen; n=1;
Encephalitozoon cuniculi|Rep: Proliferating cell nuclear
antigen - Encephalitozoon cuniculi
Length = 267
Score = 42.3 bits (95), Expect = 0.014
Identities = 16/52 (30%), Positives = 32/52 (61%)
Frame = +1
Query: 97 SILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYR 252
S++K++LE++ +++ A + G+ +Q MD +HV+ + L + F KYR
Sbjct: 22 SLMKRILESLSEIVETADIKATEKGLSIQVMDVTHVAFADIFLSSTMFTKYR 73
>UniRef50_Q9HJQ0 Cluster: DNA polymerase sliding clamp; n=5;
Thermoplasmatales|Rep: DNA polymerase sliding clamp -
Thermoplasma acidophilum
Length = 246
Score = 39.1 bits (87), Expect = 0.13
Identities = 15/58 (25%), Positives = 36/58 (62%)
Frame = +1
Query: 103 LKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRWIGTSQWA 276
LK++ + + ++++A F D+NG+ + A+D +HV+++ L + + F ++ G + A
Sbjct: 11 LKEITDLLSTIVSEAKFRVDENGMSVTAVDPAHVAMIRLEVPKEAFVEFHTDGQEEIA 68
>UniRef50_O41056 Cluster: Probable DNA polymerase sliding clamp 2;
n=3; Chlorovirus|Rep: Probable DNA polymerase sliding
clamp 2 - Paramecium bursaria Chlorella virus 1 (PBCV-1)
Length = 264
Score = 38.7 bits (86), Expect = 0.17
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +1
Query: 64 INMFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFD 243
+ MF + +KK+ DL+ A + G+ +Q+MD SHVSLV+L + F
Sbjct: 13 LQMFTIVSDAAETIKKLFVVFNDLVDIANLSFTNEGLSVQSMDTSHVSLVNLKIGKSYFK 72
Query: 244 KY 249
Y
Sbjct: 73 DY 74
Score = 35.1 bits (77), Expect = 2.1
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +3
Query: 267 SMGMNLGSMSKILKCAGDKDTVTIK-AQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEH 443
++G+ + + +IL C G+ D +TI DN D + + + SD++MK ++++ E
Sbjct: 81 TVGIKISNFVRILDCVGN-DEITISFTYDNPDELIV------KSEYSDFKMKTIDIETEE 133
Query: 444 LGIPETEYSCTIRMPSS 494
+ IPE + I S+
Sbjct: 134 MEIPEMDIDVLIDADSN 150
>UniRef50_Q4KT14 Cluster: PCNA; n=2; Nucleopolyhedrovirus|Rep: PCNA
- Chrysodeixis chalcites nucleopolyhedrovirus
Length = 263
Score = 36.7 bits (81), Expect = 0.70
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 RNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDL 437
+N+S+ + + + KILK D +TI + +N + F+ + + YE KL + D
Sbjct: 64 KNLSLSVKMSGLCKILKTCTDASVLTIWSGENDSHDYLNFKIKTGKSLKSYEYKLYHFDS 123
Query: 438 EHLGIP-ETEYSCTIRMPSSEFARI 509
+ G+ + + + M S E R+
Sbjct: 124 QDYGMSNDLQVTGRAMMHSVELKRL 148
>UniRef50_O73947 Cluster: DNA polymerase sliding clamp; n=7;
Thermococcaceae|Rep: DNA polymerase sliding clamp -
Pyrococcus furiosus
Length = 249
Score = 36.7 bits (81), Expect = 0.70
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +1
Query: 109 KVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
++++ L+ +A F ++GI ++AMD S V L+ L L + F KY
Sbjct: 15 QLIDTASKLIDEAAFKVTEDGISMRAMDPSRVVLIDLNLPSSIFSKY 61
>UniRef50_Q74MV1 Cluster: DNA polymerase sliding clamp; n=2;
Nanoarchaeum equitans|Rep: DNA polymerase sliding clamp
- Nanoarchaeum equitans
Length = 249
Score = 36.7 bits (81), Expect = 0.70
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +1
Query: 103 LKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
LKK++ + DL+++ F + GI+L AMD + +++V ++ + F Y
Sbjct: 11 LKKIVPIVADLISEGQFVATEEGIKLVAMDPASIAMVIWEMKPEAFIDY 59
>UniRef50_Q8QNE7 Cluster: EsV-1-132; n=2; Phaeovirus|Rep: EsV-1-132
- Ectocarpus siliculosus virus 1
Length = 301
Score = 36.3 bits (80), Expect = 0.92
Identities = 18/82 (21%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 264 ISMGMNLGSMSKILKCAGDKDTVTIKA-QDNADNVTFVFESPNQEKVSDYEMKLMNLDLE 440
++ G+N+ + K+++ D + + +D + + + + +KL++LD E
Sbjct: 114 VTAGLNVVVLYKMIRSMTSNDFMEWRIYEDEPHQMEIELSNSERRTKTVTSIKLLDLDAE 173
Query: 441 HLGIPETEYSCTIRMPSSEFAR 506
+ IP+ E+ + MPSSE ++
Sbjct: 174 DIIIPQVEFDRVVSMPSSELSK 195
>UniRef50_A2BN98 Cluster: DNA polymerase sliding clamp B2; n=1;
Hyperthermus butylicus DSM 5456|Rep: DNA polymerase
sliding clamp B2 - Hyperthermus butylicus (strain DSM
5456 / JCM 9403)
Length = 246
Score = 36.3 bits (80), Expect = 0.92
Identities = 19/83 (22%), Positives = 42/83 (50%)
Frame = +3
Query: 252 LDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNL 431
+D + +G+N ++K+L+ A +D + I + N V+F F K + + L+++
Sbjct: 62 VDSKVELGVNFEDVAKVLRRASKEDKLEITSDGN--TVSFAFIGKGYRK---FTLPLLDI 116
Query: 432 DLEHLGIPETEYSCTIRMPSSEF 500
E L P+ E+ +++ S +
Sbjct: 117 TAEELPEPQLEFKAIVKVMSDVY 139
>UniRef50_Q016T8 Cluster: Chromosome 06 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 06 contig 1, DNA
sequence - Ostreococcus tauri
Length = 101
Score = 35.5 bits (78), Expect = 1.6
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = -1
Query: 167 LSSQSKVACVSRSLIASKTFFKIELRSKRASNM 69
+ S SK+A V+RSL S+TF +I KRASNM
Sbjct: 59 VGSASKLASVTRSLTESRTFLRIAPSVKRASNM 91
>UniRef50_A3GFZ3 Cluster: Putative uncharacterized protein FKH3;
n=2; Pichia stipitis|Rep: Putative uncharacterized
protein FKH3 - Pichia stipitis (Yeast)
Length = 270
Score = 35.5 bits (78), Expect = 1.6
Identities = 22/73 (30%), Positives = 37/73 (50%)
Frame = +3
Query: 321 KDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSSEF 500
KD ++ + A F + N+E++ D+ MKL++ DL+ L P C + S
Sbjct: 173 KDRISAEIVSLAKLRDFHANNDNREEIIDFFMKLLHNDLD-LPSPTPVVRCPLVDWSKYH 231
Query: 501 ARIAGISHSLENQ 539
+ +AG+S ENQ
Sbjct: 232 SNLAGVSRDFENQ 244
>UniRef50_A7JF77 Cluster: Putative uncharacterized protein; n=9;
Francisella tularensis|Rep: Putative uncharacterized
protein - Francisella tularensis subsp. novicida
GA99-3549
Length = 279
Score = 34.3 bits (75), Expect = 3.7
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +3
Query: 309 CAGDKDTVTIKAQDNADNVTFV-FESPNQEKVSDYEMKLMNLDLEHLGIP 455
C D + +K ++ N+T + F + NQEK+S + L+NLD+E +P
Sbjct: 75 CGAGSDLLVVKKYNDKANLTGIDFGNWNQEKLSKNNINLINLDIEKDKLP 124
>UniRef50_A7C6V8 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. PS|Rep: Putative uncharacterized protein -
Beggiatoa sp. PS
Length = 161
Score = 34.3 bits (75), Expect = 3.7
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +1
Query: 94 SSILKKVLEAIKDLLTQA--TFDCDDNGIQLQAMDNSHVSLVSLTLRAD 234
S L+K+ ++DLLTQA T D + + L A++ + SL SLT + D
Sbjct: 53 SETLQKLTAKVRDLLTQALPTHDMEALSVSLDALEPTQTSLSSLTAQID 101
>UniRef50_A5K9Z2 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 898
Score = 34.3 bits (75), Expect = 3.7
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 288 SMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYE 413
S+ LK G DT+ K+ DNA+NV F+ Q ++D E
Sbjct: 855 SIYNTLKTKGKVDTLYFKSYDNAENVAFLMRQSKQRILADVE 896
>UniRef50_A7AQD3 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 2387
Score = 33.9 bits (74), Expect = 4.9
Identities = 22/111 (19%), Positives = 54/111 (48%)
Frame = +3
Query: 300 ILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTI 479
+L C +D++ + + D + E+P ++ + ++ L D H + + E +C
Sbjct: 178 VLPCDHQQDSILGRYDNQGDLFSTFNENPIEDSATYFDGSLDQSDPNHDSLSDKE-AC-- 234
Query: 480 RMPSSEFARIAGISHSLENQW*FHAQKKE*SSRQQATSAQRTSSWPRPLLL 632
+P F + ++H+ + F+ ++K S + +T ++ S+ RP+L+
Sbjct: 235 -VPEKHFNLVTKVAHTQHKR--FNNKRKRRSVNEVSTPDVKSPSYVRPILI 282
>UniRef50_A1CS92 Cluster: Eukaryotic translation initiation factor 3
subunit EifCb, putative; n=15; Pezizomycotina|Rep:
Eukaryotic translation initiation factor 3 subunit
EifCb, putative - Aspergillus clavatus
Length = 741
Score = 33.9 bits (74), Expect = 4.9
Identities = 26/101 (25%), Positives = 42/101 (41%)
Frame = +3
Query: 360 NVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSSEFARIAGISHSLENQ 539
++ F E P EK ++LM LEH G+ + ++ T R S + +HSLEN
Sbjct: 548 DMDFEGEKPEAEKDLTANVQLMKT-LEHYGVTDIDWDPTGRYVVSS---ASAWTHSLENG 603
Query: 540 W*FHAQKKE*SSRQQATSAQRTSSWPRPLLLTKRKRQSSLK 662
W H S ++ PRP ++ Q ++
Sbjct: 604 WNMHTFSGNTLSENPTEKFKQFLWRPRPPTFLSKEEQKQVR 644
>UniRef50_A3HAI1 Cluster: DNA polymerase sliding clamp; n=1;
Caldivirga maquilingensis IC-167|Rep: DNA polymerase
sliding clamp - Caldivirga maquilingensis IC-167
Length = 297
Score = 33.9 bits (74), Expect = 4.9
Identities = 17/80 (21%), Positives = 45/80 (56%)
Frame = +3
Query: 252 LDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNL 431
++++I++G+N + KIL+ AG +VT + ++N+ + + + ++ L+++
Sbjct: 112 VEQDINIGVNFSEVKKILQRAGKGSSVTFEVEENSLKIRM-----SGKVTRTIKLPLIDI 166
Query: 432 DLEHLGIPETEYSCTIRMPS 491
+E L P+ ++ T ++ S
Sbjct: 167 PVEQLPTPKVIFTVTAKLAS 186
>UniRef50_A7IV77 Cluster: Putative uncharacterized protein M697L;
n=2; Paramecium bursaria Chlorella virus A1|Rep:
Putative uncharacterized protein M697L - Chlorella virus
MT325
Length = 276
Score = 33.5 bits (73), Expect = 6.5
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 61 NINM-FEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADG 237
N+N+ F+ + +KK+ + +L ++G+++Q MD SHV+L ++ +
Sbjct: 27 NMNLGFKVSCQDTDAVKKIFALLDELNDDVNLMFTEHGLKIQTMDTSHVALSTVKISKGF 86
Query: 238 FDKY 249
F +Y
Sbjct: 87 FTEY 90
>UniRef50_Q8EBA7 Cluster: Tetraheme cytochrome c; n=2;
Shewanella|Rep: Tetraheme cytochrome c - Shewanella
oneidensis
Length = 116
Score = 33.5 bits (73), Expect = 6.5
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 203 CLSCHSLSELMALTSTAG*E-HLNGHESRQHVKDSQMCWR*GYSYNKSTG*C*QCH 367
CL CHS+SEL T G + N H+S + +D+ C + K C CH
Sbjct: 54 CLQCHSMSELAEQTKREGHDAKQNPHDSMHYGQDA-ACMECHGEHTKKKAICMDCH 108
>UniRef50_Q5JH70 Cluster: Oligosaccharyl transferase, STT3 subunit;
n=1; Thermococcus kodakarensis KOD1|Rep: Oligosaccharyl
transferase, STT3 subunit - Pyrococcus kodakaraensis
(Thermococcus kodakaraensis)
Length = 1000
Score = 33.5 bits (73), Expect = 6.5
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +3
Query: 360 NVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSSE 497
N T +FE+ N ++ D ++ + NL+++HL ET T+++P +E
Sbjct: 804 NGTLIFEAYNGTELVDRQVLVKNLNIDHLN--ETPVEVTVKIPQAE 847
>UniRef50_A7K9E0 Cluster: Putative uncharacterized protein Z530L;
n=1; Chlorella virus ATCV-1|Rep: Putative
uncharacterized protein Z530L - Chlorella virus ATCV-1
Length = 261
Score = 33.1 bits (72), Expect = 8.6
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 100 ILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 249
I++K L + +L + G+++ AMD HVSL ++ FD Y
Sbjct: 25 IMRKALALLSELSDDVNITFAEQGMKIVAMDTGHVSLTAVKFAKGMFDVY 74
>UniRef50_P38947 Cluster: Succinate-semialdehyde dehydrogenase
[NAD(P)+]; n=4; Bacteria|Rep: Succinate-semialdehyde
dehydrogenase [NAD(P)+] - Clostridium kluyveri
Length = 472
Score = 33.1 bits (72), Expect = 8.6
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +3
Query: 360 NVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSSEFAR 506
N V P +KVS + ++LMN +L+ LG PE + PS E A+
Sbjct: 130 NTIIVAPHPKAKKVSAHTVELMNAELKKLGAPENIIQ-IVEAPSREAAK 177
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 713,864,405
Number of Sequences: 1657284
Number of extensions: 13635601
Number of successful extensions: 33101
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 32044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33080
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70377768045
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -