Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30883
(811 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55653| Best HMM Match : No HMM Matches (HMM E-Value=.) 146 1e-35
SB_42081| Best HMM Match : ATP-synt_ab (HMM E-Value=8.3e-07) 93 2e-19
SB_49893| Best HMM Match : ATP-synt_ab (HMM E-Value=0) 71 1e-12
SB_7724| Best HMM Match : ATP-synt_ab_C (HMM E-Value=0) 70 2e-12
SB_2379| Best HMM Match : Sulfatase (HMM E-Value=0.00017) 38 0.010
SB_38251| Best HMM Match : fn3 (HMM E-Value=2.1e-05) 33 0.21
SB_8305| Best HMM Match : Plasmodium_HRP (HMM E-Value=8.8) 29 3.4
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_53572| Best HMM Match : efhand (HMM E-Value=0.0053) 29 3.4
SB_52791| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_31509| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_17671| Best HMM Match : 7tm_1 (HMM E-Value=0.00083) 29 3.4
SB_21210| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_21143| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.42) 29 4.5
SB_28275| Best HMM Match : REJ (HMM E-Value=0.0012) 29 5.9
SB_49877| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_1091| Best HMM Match : Cupin_4 (HMM E-Value=0) 28 7.8
>SB_55653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 390
Score = 146 bits (355), Expect = 1e-35
Identities = 72/84 (85%), Positives = 77/84 (91%)
Frame = +3
Query: 3 DIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREP 182
DIVKRTGAIVDVPVGE++LGRVVDALGNPIDGKGP +R RVG+KAPGIIPR SV+EP
Sbjct: 25 DIVKRTGAIVDVPVGEELLGRVVDALGNPIDGKGPTGG-TRARVGVKAPGIIPRTSVKEP 83
Query: 183 MQTGIKAVDSLVPIGRGQRELIIG 254
M TGIKAVDSLVPIGRGQRELIIG
Sbjct: 84 MLTGIKAVDSLVPIGRGQRELIIG 107
Score = 145 bits (351), Expect = 4e-35
Identities = 74/97 (76%), Positives = 81/97 (83%), Gaps = 11/97 (11%)
Frame = +2
Query: 257 RQTGKTALAIDTIINQQRFNKGEDE-----------KKKLYCIYVAIGQKRSTVAQIVKR 403
RQTGKTA+AIDTIINQ+RFN G DE +KKLYCIYVAIGQKRSTVAQ+VK+
Sbjct: 109 RQTGKTAIAIDTIINQKRFNDGVDEIDILNTRGLFLEKKLYCIYVAIGQKRSTVAQLVKK 168
Query: 404 LTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGNF 514
+TDA A+ YTIIVSATASDAAPLQYLAPYSGCAMG F
Sbjct: 169 MTDADAMKYTIIVSATASDAAPLQYLAPYSGCAMGEF 205
Score = 94.7 bits (225), Expect = 8e-20
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = +3
Query: 624 YPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPT 764
YPGDVFYLHSRLLERAAKM+D GGGSLTALPVIETQAGDVSAYIPT
Sbjct: 243 YPGDVFYLHSRLLERAAKMNDSNGGGSLTALPVIETQAGDVSAYIPT 289
Score = 81.8 bits (193), Expect = 6e-16
Identities = 38/39 (97%), Positives = 38/39 (97%)
Frame = +1
Query: 505 G*FFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGRE 621
G FFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGRE
Sbjct: 203 GEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGRE 241
Score = 35.1 bits (77), Expect = 0.068
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +2
Query: 764 NVISITDGQIFLETEL 811
NVISITDGQIFLETEL
Sbjct: 290 NVISITDGQIFLETEL 305
>SB_42081| Best HMM Match : ATP-synt_ab (HMM E-Value=8.3e-07)
Length = 99
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/47 (89%), Positives = 45/47 (95%)
Frame = +3
Query: 624 YPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPT 764
YPGDVFYLHSRLLERAAK+SD +G GSLTALP+IETQAGDVSAYIPT
Sbjct: 5 YPGDVFYLHSRLLERAAKLSDALGAGSLTALPIIETQAGDVSAYIPT 51
Score = 32.3 bits (70), Expect = 0.48
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +2
Query: 764 NVISITDGQIFLETEL 811
NVISITDGQIFL++EL
Sbjct: 52 NVISITDGQIFLDSEL 67
>SB_49893| Best HMM Match : ATP-synt_ab (HMM E-Value=0)
Length = 313
Score = 70.9 bits (166), Expect = 1e-12
Identities = 32/39 (82%), Positives = 36/39 (92%)
Frame = +1
Query: 505 G*FFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGRE 621
G +FRD G+ ALI+YDDLSKQAVAYRQ+SLLLRRPPGRE
Sbjct: 46 GEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGRE 84
Score = 70.1 bits (164), Expect = 2e-12
Identities = 37/58 (63%), Positives = 45/58 (77%), Gaps = 11/58 (18%)
Frame = +3
Query: 624 YPGDVFYLHSRLLERAAKMSDKM------GG-----GSLTALPVIETQAGDVSAYIPT 764
YPGDVFYLHSRLLERA+++S++ G GSLTALP+IETQAGDVSA++PT
Sbjct: 86 YPGDVFYLHSRLLERASRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPT 143
Score = 61.3 bits (142), Expect = 9e-10
Identities = 24/48 (50%), Positives = 40/48 (83%)
Frame = +2
Query: 371 KRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGNF 514
K+ST+A +V++L + GA+ TI+V+A+AS++A LQ++APY+GC MG +
Sbjct: 1 KQSTIANVVRKLEENGALANTIVVAASASESAALQFIAPYAGCTMGEY 48
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +2
Query: 764 NVISITDGQIFLETEL 811
NVISITDGQIFLE+ +
Sbjct: 144 NVISITDGQIFLESAM 159
>SB_7724| Best HMM Match : ATP-synt_ab_C (HMM E-Value=0)
Length = 448
Score = 70.1 bits (164), Expect = 2e-12
Identities = 29/79 (36%), Positives = 49/79 (62%)
Frame = +3
Query: 18 TGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGI 197
TG + +PVG + LGR+++ +G PID +GP++T R + +AP + + +E ++TGI
Sbjct: 141 TGGPITIPVGPETLGRIINVIGEPIDERGPVETDKRAAIHAEAPEFVEMSTEQEILETGI 200
Query: 198 KAVDSLVPIGRGQRELIIG 254
K VD L P +G + + G
Sbjct: 201 KVVDLLAPYAKGGKIGLFG 219
>SB_2379| Best HMM Match : Sulfatase (HMM E-Value=0.00017)
Length = 301
Score = 37.9 bits (84), Expect = 0.010
Identities = 19/80 (23%), Positives = 39/80 (48%)
Frame = +2
Query: 230 WSA*VDHWYRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLT 409
W+ D+W + + D N+++F+ K+++Y V+ +V + K L+
Sbjct: 219 WNGKEDYWDHSSQEDVWGTDLRDNEKKFSHISSPKRRIYAAMVS--SLDESVETVHKALS 276
Query: 410 DAGAINYTIIVSATASDAAP 469
+ G +N T++V T + AP
Sbjct: 277 ETGMLNNTVLVFTTDNGGAP 296
>SB_38251| Best HMM Match : fn3 (HMM E-Value=2.1e-05)
Length = 352
Score = 33.5 bits (73), Expect = 0.21
Identities = 22/81 (27%), Positives = 42/81 (51%)
Frame = -1
Query: 490 VRSQVLQGSSIGSGGRHNDCVVDGTSISQSLHNLSYSRPLLSNGNINAVQLLLLIFTLVE 311
V+S + + G+ G D V S +++++ P+ +NG I+ ++ + L E
Sbjct: 89 VKSGICSKTCAGAPGPPYDISV---SFENETYHVTWRTPIETNGRIDGYKVFFELRNLTE 145
Query: 310 SLLVDDSINSQGSLTSLTVPM 248
LL + + ++GS TSL VP+
Sbjct: 146 -LLKNTIVETEGSETSLDVPL 165
>SB_8305| Best HMM Match : Plasmodium_HRP (HMM E-Value=8.8)
Length = 366
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/86 (26%), Positives = 33/86 (38%)
Frame = -3
Query: 275 QSYQFDGTNDQLTLTTTNWYQRVNSLDTSLHRLTHRHTGNDTWRLNTDPHTGFRVDWSLA 96
Q Q + TN+ T TT Q N+ + + H NDT+ NT HT +
Sbjct: 230 QHIQPNNTNNPTTQTTKRHIQHNNTYNPTAHTTQQPKQPNDTY--NTTTHT---TQQHIQ 284
Query: 95 INRVSQSVYYTPKDLLSDGNVYDSTS 18
N T K + N Y+ T+
Sbjct: 285 PNNTYNPTTQTTKRHIQHNNTYNPTT 310
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 514 FRDNGKHALIIYDDLSKQAVAYRQM 588
+R G HA I+YD L +VA R+M
Sbjct: 349 YRKGGDHAYILYDSLDAASVAAREM 373
>SB_53572| Best HMM Match : efhand (HMM E-Value=0.0053)
Length = 263
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 53 DPWACSRRFGKPY*WQGTNRHEIPYEGRY 139
D ACSR G W G++ +EIPY G +
Sbjct: 83 DTSACSRIAGNTGYWDGSDTNEIPYFGAW 111
>SB_52791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 29.5 bits (63), Expect = 3.4
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 6/139 (4%)
Frame = -1
Query: 496 TRVRSQVLQGSSIGS----GGRHNDCVVDGTSISQSLHNLSYSRPLLSNGNINAVQLLLL 329
T + + G+SI G + ++DGTSISQ L + + LL +G ++ L +
Sbjct: 5 TSISQLFIDGTSISQLFIDGTSISQLLIDGTSISQPLIDGTSISQLLIDG--TSISQLFI 62
Query: 328 IFTLVESLLVDDSINSQGSL--TSLTVPMINSR*PRPIGTRESTALIPVCIGSRTDTRGM 155
T + +L+D + SQ + TS++ +I+ + + T++ + I + ++ +
Sbjct: 63 DGTSISQVLIDGTSISQLFIDGTSISQLLIDGTSISQLFI-DGTSISQLLIDGTSISQLL 121
Query: 154 IPGALIPTLIRDFVSIGPL 98
I G I L D SI L
Sbjct: 122 IGGTSISQLFIDGTSISQL 140
>SB_31509| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = -3
Query: 230 TTNWYQRVNSLDTSLHRLTHRHTGNDTWRLNTDPHTGFRVDWSLAINRVSQSVYYTPKDL 51
TTN R N T R N TW++ ++ + + W +A N S+++ Y
Sbjct: 64 TTNMRSRTNL--TKKITTNMRSRTNSTWKITSNMRSRTNMSWKIATNMRSRTLGY----- 116
Query: 50 LSDGNVYDSTSTLD 9
L D N + + LD
Sbjct: 117 LEDNNEHAQLNKLD 130
>SB_17671| Best HMM Match : 7tm_1 (HMM E-Value=0.00083)
Length = 585
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 571 VAYRQMSLLLRRPPGREVILVTCSIFTPVCLSVPL 675
V +R S RRP GR+V+L S + L VPL
Sbjct: 43 VVFRFQSKGSRRPQGRDVLLAALSFLNSLVLLVPL 77
>SB_21210| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 529 KHALIIYDDLSKQAVAYRQMSLLLRRPPGR 618
KH L+I D+S A A R++S PGR
Sbjct: 209 KHVLVILTDMSSYAEALREVSAAREEVPGR 238
>SB_21143| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.42)
Length = 870
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 579 PSDVSTAASSPRP*GYPGDVFYLHSRLLERAAKMSDKMGGGSLTAL 716
P +T + P P +PGD + L S + +A SD GG S+ L
Sbjct: 159 PPHSNTGSYPPHPGEHPGDQYSLGSAGVMSSATGSDDQGGKSVLCL 204
>SB_28275| Best HMM Match : REJ (HMM E-Value=0.0012)
Length = 1551
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -3
Query: 164 TGNDTWRLNTDPHTGFRVDWSLAI-NRVSQSVYYTPKD 54
T N T+ ++ DPH G+ V + + N +Q+V+ T D
Sbjct: 366 TPNTTFTISIDPHLGYNVTYDVRFGNDDNQTVFVTTAD 403
>SB_49877| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 48 EQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPG 152
E ILGR+ + NP+ G+G T S ++ I A G
Sbjct: 211 ETILGRLPSFMENPLAGEGEFSTHSMLKDDIYAIG 245
>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3287
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 379 YCSSNCEEID*CWCHQLHNHCVCHR 453
Y CE +D C+ H N+ C+R
Sbjct: 1834 YYGKQCETVDTCFAHACKNNATCNR 1858
>SB_1091| Best HMM Match : Cupin_4 (HMM E-Value=0)
Length = 584
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3
Query: 803 FPRRSVHQ*WRSRCGNVS*HIT 738
FPR ++HQ +CGN S HIT
Sbjct: 241 FPRGTIHQAETLKCGNHSTHIT 262
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,171,131
Number of Sequences: 59808
Number of extensions: 609357
Number of successful extensions: 1715
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1708
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2251677692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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