Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30883
(811 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 155 4e-38
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 155 4e-38
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 155 4e-38
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 63 3e-10
Z82053-6|CAB04832.1| 106|Caenorhabditis elegans Hypothetical pr... 55 5e-08
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 50 1e-06
AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily a... 46 3e-05
AL021482-1|CAA16338.1| 385|Caenorhabditis elegans Hypothetical ... 31 0.74
Z48045-11|CAM33500.1| 887|Caenorhabditis elegans Hypothetical p... 30 1.7
Z48045-10|CAA88101.2| 849|Caenorhabditis elegans Hypothetical p... 30 1.7
AL023815-2|CAD92383.1| 146|Caenorhabditis elegans Hypothetical ... 30 2.3
Z81058-12|CAB02924.1| 522|Caenorhabditis elegans Hypothetical p... 29 5.2
AL031254-4|CAA20283.1| 522|Caenorhabditis elegans Hypothetical ... 29 5.2
AL132876-2|CAB60843.3| 534|Caenorhabditis elegans Hypothetical ... 28 9.1
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 155 bits (376), Expect = 4e-38
Identities = 72/84 (85%), Positives = 81/84 (96%)
Frame = +2
Query: 257 RQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTI 436
RQTGKTA+AIDTIINQ+RFN D+KKKL+CIYVA+GQKRSTVAQIVKRLTDAGA++YTI
Sbjct: 172 RQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTI 231
Query: 437 IVSATASDAAPLQYLAPYSGCAMG 508
+VSATASDAAPLQ+LAPYSGCAMG
Sbjct: 232 VVSATASDAAPLQFLAPYSGCAMG 255
Score = 147 bits (357), Expect = 7e-36
Identities = 71/84 (84%), Positives = 76/84 (90%)
Frame = +3
Query: 3 DIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREP 182
DIVKRTGAIVDVPVG+ +LGRVVDALGNPIDGKGPI R RV +KAPGIIPR+SVREP
Sbjct: 87 DIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREP 146
Query: 183 MQTGIKAVDSLVPIGRGQRELIIG 254
M TG+KAVDSLVPIGRGQRELIIG
Sbjct: 147 MVTGVKAVDSLVPIGRGQRELIIG 170
Score = 94.3 bits (224), Expect = 9e-20
Identities = 43/47 (91%), Positives = 46/47 (97%)
Frame = +3
Query: 624 YPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPT 764
YPGDVFYLHSRLLERAAKM++ +GGGSLTALPVIETQAGDVSAYIPT
Sbjct: 295 YPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPT 341
Score = 77.4 bits (182), Expect = 1e-14
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +1
Query: 505 G*FFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGRE 621
G FRDNGKHALII+DDLSKQAVAYRQMSLLLRRPPGRE
Sbjct: 255 GEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGRE 293
Score = 35.1 bits (77), Expect = 0.060
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +2
Query: 764 NVISITDGQIFLETEL 811
NVISITDGQIFLETEL
Sbjct: 342 NVISITDGQIFLETEL 357
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 155 bits (376), Expect = 4e-38
Identities = 72/84 (85%), Positives = 81/84 (96%)
Frame = +2
Query: 257 RQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTI 436
RQTGKTA+AIDTIINQ+RFN D+KKKL+CIYVA+GQKRSTVAQIVKRLTDAGA++YTI
Sbjct: 164 RQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTI 223
Query: 437 IVSATASDAAPLQYLAPYSGCAMG 508
+VSATASDAAPLQ+LAPYSGCAMG
Sbjct: 224 VVSATASDAAPLQFLAPYSGCAMG 247
Score = 104 bits (249), Expect = 9e-23
Identities = 50/62 (80%), Positives = 53/62 (85%)
Frame = +3
Query: 69 VDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELI 248
V LGNPIDGKGPI R RV +KAPGIIPR+SVREPM TG+KAVDSLVPIGRGQRELI
Sbjct: 101 VVVLGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELI 160
Query: 249 IG 254
IG
Sbjct: 161 IG 162
Score = 94.3 bits (224), Expect = 9e-20
Identities = 43/47 (91%), Positives = 46/47 (97%)
Frame = +3
Query: 624 YPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPT 764
YPGDVFYLHSRLLERAAKM++ +GGGSLTALPVIETQAGDVSAYIPT
Sbjct: 287 YPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPT 333
Score = 77.4 bits (182), Expect = 1e-14
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +1
Query: 505 G*FFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGRE 621
G FRDNGKHALII+DDLSKQAVAYRQMSLLLRRPPGRE
Sbjct: 247 GEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGRE 285
Score = 35.1 bits (77), Expect = 0.060
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +2
Query: 764 NVISITDGQIFLETEL 811
NVISITDGQIFLETEL
Sbjct: 334 NVISITDGQIFLETEL 349
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 155 bits (376), Expect = 4e-38
Identities = 72/84 (85%), Positives = 81/84 (96%)
Frame = +2
Query: 257 RQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTI 436
RQTGKTA+AIDTIINQ+RFN D+KKKL+CIYVA+GQKRSTVAQIVKRLTDAGA++YTI
Sbjct: 199 RQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTI 258
Query: 437 IVSATASDAAPLQYLAPYSGCAMG 508
+VSATASDAAPLQ+LAPYSGCAMG
Sbjct: 259 VVSATASDAAPLQFLAPYSGCAMG 282
Score = 147 bits (357), Expect = 7e-36
Identities = 71/84 (84%), Positives = 76/84 (90%)
Frame = +3
Query: 3 DIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREP 182
DIVKRTGAIVDVPVG+ +LGRVVDALGNPIDGKGPI R RV +KAPGIIPR+SVREP
Sbjct: 114 DIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREP 173
Query: 183 MQTGIKAVDSLVPIGRGQRELIIG 254
M TG+KAVDSLVPIGRGQRELIIG
Sbjct: 174 MVTGVKAVDSLVPIGRGQRELIIG 197
Score = 94.3 bits (224), Expect = 9e-20
Identities = 43/47 (91%), Positives = 46/47 (97%)
Frame = +3
Query: 624 YPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPT 764
YPGDVFYLHSRLLERAAKM++ +GGGSLTALPVIETQAGDVSAYIPT
Sbjct: 322 YPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPT 368
Score = 77.4 bits (182), Expect = 1e-14
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +1
Query: 505 G*FFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGRE 621
G FRDNGKHALII+DDLSKQAVAYRQMSLLLRRPPGRE
Sbjct: 282 GEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGRE 320
Score = 35.1 bits (77), Expect = 0.060
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +2
Query: 764 NVISITDGQIFLETEL 811
NVISITDGQIFLETEL
Sbjct: 369 NVISITDGQIFLETEL 384
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase
subunit protein 2 protein.
Length = 538
Score = 62.9 bits (146), Expect = 3e-10
Identities = 30/82 (36%), Positives = 48/82 (58%)
Frame = +3
Query: 9 VKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQ 188
V TG + +PVG + LGR+++ +G PID +GPI +K+ + +AP + +E +
Sbjct: 134 VADTGDPIKIPVGPETLGRIMNVIGEPIDERGPIASKNFAAIHAEAPEFVEMSVEQEILV 193
Query: 189 TGIKAVDSLVPIGRGQRELIIG 254
TGIK VD L P +G + + G
Sbjct: 194 TGIKVVDLLAPYAKGGKIGLFG 215
>Z82053-6|CAB04832.1| 106|Caenorhabditis elegans Hypothetical
protein T26E3.7 protein.
Length = 106
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/29 (79%), Positives = 29/29 (100%)
Frame = +2
Query: 422 INYTIIVSATASDAAPLQYLAPYSGCAMG 508
++YTI+VSATASDAAPL++LAPYSGCA+G
Sbjct: 1 MDYTIVVSATASDAAPLKFLAPYSGCAIG 29
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1
Query: 505 G*FFRDNGKHALIIYDDLSKQA 570
G F DNGKHALII+DDLSK+A
Sbjct: 29 GEHFLDNGKHALIIFDDLSKKA 50
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 50.4 bits (115), Expect = 1e-06
Identities = 27/78 (34%), Positives = 42/78 (53%)
Frame = +3
Query: 6 IVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPM 185
I + TG I+ PV E +LGR+ + G PID P+ + + + + R+ E +
Sbjct: 93 ICEFTGDILRTPVSEDMLGRIFNGSGKPIDKGPPVLAEDFLDINGQPINPWSRIYPEEMI 152
Query: 186 QTGIKAVDSLVPIGRGQR 239
QTGI A+D + I RGQ+
Sbjct: 153 QTGISAIDVMNSIARGQK 170
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 529 KHALIIYDDLSKQAVAYRQMSLLLRRPPGR 618
KH L++ D+S A A R++S PGR
Sbjct: 271 KHVLVVLTDMSSYAEALREVSAAREEVPGR 300
>AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily
assigned gene nameprotein 300 protein.
Length = 501
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = +3
Query: 18 TGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGI 197
TG I PV +LGR+ + G PID P+ + + + + R+ E +QTGI
Sbjct: 109 TGDIFRSPVSLDMLGRIFNGSGKPIDKGPPVLPEDYLDINGQPINPFNRIYPEEMIQTGI 168
Query: 198 KAVDSLVPIGRGQR 239
A+D + I RGQ+
Sbjct: 169 SAIDVMNSIARGQK 182
Score = 31.1 bits (67), Expect = 0.98
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 526 GKHALIIYDDLSKQAVAYRQMSLLLRRPPGR 618
GKH L++ D+S A A R++S PGR
Sbjct: 282 GKHVLVVLTDMSSYAEALREISAAREEVPGR 312
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +3
Query: 621 GYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIP 761
G+PG ++ + + ERA ++ + G S+T +P++ D++ IP
Sbjct: 314 GFPGYMYTDLATIYERAGRVKGREG--SITQIPILTMPNNDITHPIP 358
>AL021482-1|CAA16338.1| 385|Caenorhabditis elegans Hypothetical
protein Y39A1B.1 protein.
Length = 385
Score = 31.5 bits (68), Expect = 0.74
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 227 SWSA*VDHWYRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVA 361
+W++ V+H Y QTG A D ++ +Q FN +KL +Y +
Sbjct: 122 TWTSSVEHSYLQTG--LKAADDLLAKQSFNTSRGHYQKLVIVYAS 164
>Z48045-11|CAM33500.1| 887|Caenorhabditis elegans Hypothetical
protein C41C4.5b protein.
Length = 887
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 397 EEID*CWCHQLHNHCVCHR 453
E++D C CH+ +NHCV R
Sbjct: 308 EQVDLCLCHKEYNHCVSTR 326
>Z48045-10|CAA88101.2| 849|Caenorhabditis elegans Hypothetical
protein C41C4.5a protein.
Length = 849
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 397 EEID*CWCHQLHNHCVCHR 453
E++D C CH+ +NHCV R
Sbjct: 270 EQVDLCLCHKEYNHCVSTR 288
>AL023815-2|CAD92383.1| 146|Caenorhabditis elegans Hypothetical
protein H28O16.1b protein.
Length = 146
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2
Query: 143 GARYHSPCVCA*AYADWYQGC*LSGTNWSWS 235
G R H VCA W QG S NW+W+
Sbjct: 115 GPRNHPTFVCARTNGYWSQGRRFSCANWTWT 145
>Z81058-12|CAB02924.1| 522|Caenorhabditis elegans Hypothetical
protein F11E6.1a protein.
Length = 522
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Frame = -3
Query: 224 NWYQRVNSLDTSLHRLTHRHTGNDTWRLNTD----PHTGFR-VDWSLAINRVSQSVYYTP 60
+W++ + D + L H TG W L D P+ + VD + +NR +Q Y P
Sbjct: 379 DWFRAESYADDIITDLNHHVTGWTDWNLCLDETGGPNWAYNVVDSPIIVNRTAQEFYKQP 438
>AL031254-4|CAA20283.1| 522|Caenorhabditis elegans Hypothetical
protein F11E6.1a protein.
Length = 522
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Frame = -3
Query: 224 NWYQRVNSLDTSLHRLTHRHTGNDTWRLNTD----PHTGFR-VDWSLAINRVSQSVYYTP 60
+W++ + D + L H TG W L D P+ + VD + +NR +Q Y P
Sbjct: 379 DWFRAESYADDIITDLNHHVTGWTDWNLCLDETGGPNWAYNVVDSPIIVNRTAQEFYKQP 438
>AL132876-2|CAB60843.3| 534|Caenorhabditis elegans Hypothetical
protein Y105E8A.2 protein.
Length = 534
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = -1
Query: 349 AVQLLLLIFTLVESLLVDDSINSQGSLTSLTV 254
A+ LL L+F+L ++ +DDSI+ S TS +V
Sbjct: 12 AIPLLFLLFSLYKTEKIDDSIHYYVSFTSDSV 43
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,608,739
Number of Sequences: 27780
Number of extensions: 438606
Number of successful extensions: 1124
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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