Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30881
         (714 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7B196 Cluster: Putative uncharacterized protein; n=1; ...    36   1.3  
UniRef50_Q8T427 Cluster: AT20781p; n=3; Sophophora|Rep: AT20781p...    34   3.0  
UniRef50_UPI00006CEB53 Cluster: hypothetical protein TTHERM_0037...    33   5.3  
UniRef50_A0DWE4 Cluster: Chromosome undetermined scaffold_67, wh...    33   7.0  

>UniRef50_A7B196 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus gnavus ATCC 29149|Rep: Putative
           uncharacterized protein - Ruminococcus gnavus ATCC 29149
          Length = 336

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 20/77 (25%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
 Frame = +1

Query: 331 TTPTRLINWTKSM-GINLKATDSICQFHFKEEHIKMYDKIKIGEVIYFSYLLKKVLKEEA 507
           T  T +I++TK + G++ +A  S+ +   +  ++K+YD IK+ E+    YL +  L+   
Sbjct: 210 TRDTAIIHFTKELHGVSNQARTSLIRCILQHINLKIYDTIKVTELAKQFYLSESALRRRF 269

Query: 508 CQQLSINFILY*TNSKV 558
            +++ I+   Y    K+
Sbjct: 270 KEKVGISINEYVNQRKI 286


>UniRef50_Q8T427 Cluster: AT20781p; n=3; Sophophora|Rep: AT20781p -
           Drosophila melanogaster (Fruit fly)
          Length = 391

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 18/66 (27%), Positives = 34/66 (51%)
 Frame = +3

Query: 489 STKGRSLPTIEHQFHPLLDQQQSILKVQELLIDPQNSCYSTDYIEQSQESLPGQVQIEKT 668
           +T GRS+  +  +  P +DQ + +  +     +P   C   D +EQ ++   GQ ++EK 
Sbjct: 288 TTDGRSMAMVLEKLVPSIDQVEGLPLLTLYTREPCPLC--DDLVEQLEQGFAGQYRLEKV 345

Query: 669 HDDSRE 686
           + D +E
Sbjct: 346 YIDRKE 351


>UniRef50_UPI00006CEB53 Cluster: hypothetical protein
           TTHERM_00370790; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00370790 - Tetrahymena
           thermophila SB210
          Length = 630

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
 Frame = +3

Query: 522 HQFHPL-LDQQQSILKV--QELLIDPQNSCYSTDYIEQSQESLPGQVQIEKTHDDSREQE 692
           H   PL +DQQ S L+V  +EL + P+N  +   Y +   E L  +V+IE  + D+R+  
Sbjct: 195 HSLGPLKIDQQISPLRVLPKELQL-PKNVAFQRCYPQDIIEQLENEVKIENLNIDTRKIS 253

Query: 693 L-IESIDY 713
           L I  +DY
Sbjct: 254 LDISQLDY 261


>UniRef50_A0DWE4 Cluster: Chromosome undetermined scaffold_67, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_67,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 718

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 22/71 (30%), Positives = 33/71 (46%)
 Frame = +3

Query: 486 ESTKGRSLPTIEHQFHPLLDQQQSILKVQELLIDPQNSCYSTDYIEQSQESLPGQVQIEK 665
           ESTK +   T + Q      QQ+S  + QE     Q S    +  +Q QES   Q +  +
Sbjct: 422 ESTKQQQEST-QSQLESTQQQQESTQQQQESTQQQQESTQQLESTQQQQESTQQQQESTQ 480

Query: 666 THDDSREQELI 698
             +  ++QELI
Sbjct: 481 KQEQQQQQELI 491


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 550,186,977
Number of Sequences: 1657284
Number of extensions: 9944347
Number of successful extensions: 26024
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26021
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)