Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30881
         (714 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   5.7  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   7.5  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   7.5  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   7.5  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   7.5  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    21   9.9  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   9.9  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -1

Query: 150 LYIKN*TISKQVKPSITLLHL 88
           L++KN  ISK+V+P   L ++
Sbjct: 508 LHLKNSPISKKVRPPQVLCYI 528


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 292 SCLYAHLNSSSP 257
           S +Y HLN SSP
Sbjct: 242 SVMYPHLNRSSP 253


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 464 ITSPILILSYIFICSS 417
           +TSPI  L Y++ C +
Sbjct: 150 LTSPIFNLVYVYCCDN 165


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 292 SCLYAHLNSSSP 257
           S +Y HLN SSP
Sbjct: 190 SVMYPHLNRSSP 201


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 292 SCLYAHLNSSSP 257
           S +Y HLN SSP
Sbjct: 373 SVMYPHLNRSSP 384


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 418 EEHIKMYDKIKIGEVIYFSYLLK 486
           E++   YD I + E++    LLK
Sbjct: 17  EQYTTKYDNINVDEILASERLLK 39


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -3

Query: 595 FCGSISSSCTLRILCCWSS 539
           F G++ S+ T +++C W +
Sbjct: 14  FSGALVSATTDKVVCYWGT 32


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,547
Number of Sequences: 336
Number of extensions: 2991
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)