Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30881
(714 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK001302-1|BAA91611.1| 399|Homo sapiens protein ( Homo sapiens ... 25 5.5
BC002932-1|AAH02932.1| 850|Homo sapiens CEP110 protein protein. 30 7.2
AY651261-1|AAX35689.1| 1244|Homo sapiens centrosomal protein 1 p... 30 7.2
AL137068-7|CAD20123.1| 1007|Homo sapiens centrosomal protein 110... 30 7.2
AL137068-6|CAI12359.1| 346|Homo sapiens centrosomal protein 110... 30 7.2
AL137068-5|CAI12358.1| 1773|Homo sapiens centrosomal protein 110... 30 7.2
AL137068-4|CAI12357.1| 994|Homo sapiens centrosomal protein 110... 30 7.2
AL137068-2|CAM13285.1| 2325|Homo sapiens centrosomal protein 110... 30 7.2
AK074079-1|BAB84905.1| 1793|Homo sapiens FLJ00150 protein protein. 30 7.2
AF513978-1|AAP43846.1| 2325|Homo sapiens CENTRIOLIN protein. 30 7.2
AF083322-1|AAC32373.1| 994|Homo sapiens centriole associated pr... 30 9.5
>AK001302-1|BAA91611.1| 399|Homo sapiens protein ( Homo sapiens
cDNA FLJ10440 fis, clone NT2RP1000695. ).
Length = 399
Score = 25.0 bits (52), Expect(2) = 5.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 137 FLMYSDIHCNLNYTCNTNPILIYLLKQNHLINFATMVKVL 256
+L ++ HC+ + N ILIYLL L+ V++L
Sbjct: 232 YLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPTVELL 271
Score = 24.2 bits (50), Expect(2) = 5.5
Identities = 14/23 (60%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +2
Query: 41 FLEN-LVKI*IKINYLHKCSRVI 106
FL N L KI IKIN LH C +I
Sbjct: 170 FLVNQLFKIYIKINKLHLCKPLI 192
>BC002932-1|AAH02932.1| 850|Homo sapiens CEP110 protein protein.
Length = 850
Score = 30.3 bits (65), Expect = 7.2
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Frame = +3
Query: 501 RSLPTIEHQFHPLLDQQQSI-LKVQELLIDPQNSCYSTDYIEQSQESLPGQVQIEKT--- 668
+ + + H LL +++S+ +V+EL Q D+I+ + ESL +++IEK+
Sbjct: 687 KEMEELHHNIDDLLQEKKSLECEVEELHRTVQKRQQQKDFIDGNVESLMTELEIEKSLKH 746
Query: 669 HDDSREQ-ELIE 701
H+D ++ E IE
Sbjct: 747 HEDIVDEIECIE 758
>AY651261-1|AAX35689.1| 1244|Homo sapiens centrosomal protein 1
protein.
Length = 1244
Score = 30.3 bits (65), Expect = 7.2
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Frame = +3
Query: 501 RSLPTIEHQFHPLLDQQQSI-LKVQELLIDPQNSCYSTDYIEQSQESLPGQVQIEKT--- 668
+ + + H LL +++S+ +V+EL Q D+I+ + ESL +++IEK+
Sbjct: 921 KEMEELHHNIDDLLQEKKSLECEVEELHRTVQKRQQQKDFIDGNVESLMTELEIEKSLKH 980
Query: 669 HDDSREQ-ELIE 701
H+D ++ E IE
Sbjct: 981 HEDIVDEIECIE 992
>AL137068-7|CAD20123.1| 1007|Homo sapiens centrosomal protein 110kDa
protein.
Length = 1007
Score = 30.3 bits (65), Expect = 7.2
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Frame = +3
Query: 501 RSLPTIEHQFHPLLDQQQSI-LKVQELLIDPQNSCYSTDYIEQSQESLPGQVQIEKT--- 668
+ + + H LL +++S+ +V+EL Q D+I+ + ESL +++IEK+
Sbjct: 23 KEMEELHHNIDDLLQEKKSLECEVEELHRTVQKRQQQKDFIDGNVESLMTELEIEKSLKH 82
Query: 669 HDDSREQ-ELIE 701
H+D ++ E IE
Sbjct: 83 HEDIVDEIECIE 94
>AL137068-6|CAI12359.1| 346|Homo sapiens centrosomal protein 110kDa
protein.
Length = 346
Score = 30.3 bits (65), Expect = 7.2
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Frame = +3
Query: 501 RSLPTIEHQFHPLLDQQQSI-LKVQELLIDPQNSCYSTDYIEQSQESLPGQVQIEKT--- 668
+ + + H LL +++S+ +V+EL Q D+I+ + ESL +++IEK+
Sbjct: 23 KEMEELHHNIDDLLQEKKSLECEVEELHRTVQKRQQQKDFIDGNVESLMTELEIEKSLKH 82
Query: 669 HDDSREQ-ELIE 701
H+D ++ E IE
Sbjct: 83 HEDIVDEIECIE 94
>AL137068-5|CAI12358.1| 1773|Homo sapiens centrosomal protein 110kDa
protein.
Length = 1773
Score = 30.3 bits (65), Expect = 7.2
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Frame = +3
Query: 501 RSLPTIEHQFHPLLDQQQSI-LKVQELLIDPQNSCYSTDYIEQSQESLPGQVQIEKT--- 668
+ + + H LL +++S+ +V+EL Q D+I+ + ESL +++IEK+
Sbjct: 802 KEMEELHHNIDDLLQEKKSLECEVEELHRTVQKRQQQKDFIDGNVESLMTELEIEKSLKH 861
Query: 669 HDDSREQ-ELIE 701
H+D ++ E IE
Sbjct: 862 HEDIVDEIECIE 873
>AL137068-4|CAI12357.1| 994|Homo sapiens centrosomal protein 110kDa
protein.
Length = 994
Score = 30.3 bits (65), Expect = 7.2
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Frame = +3
Query: 501 RSLPTIEHQFHPLLDQQQSI-LKVQELLIDPQNSCYSTDYIEQSQESLPGQVQIEKT--- 668
+ + + H LL +++S+ +V+EL Q D+I+ + ESL +++IEK+
Sbjct: 802 KEMEELHHNIDDLLQEKKSLECEVEELHRTVQKRQQQKDFIDGNVESLMTELEIEKSLKH 861
Query: 669 HDDSREQ-ELIE 701
H+D ++ E IE
Sbjct: 862 HEDIVDEIECIE 873
>AL137068-2|CAM13285.1| 2325|Homo sapiens centrosomal protein 110kDa
protein.
Length = 2325
Score = 30.3 bits (65), Expect = 7.2
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Frame = +3
Query: 501 RSLPTIEHQFHPLLDQQQSI-LKVQELLIDPQNSCYSTDYIEQSQESLPGQVQIEKT--- 668
+ + + H LL +++S+ +V+EL Q D+I+ + ESL +++IEK+
Sbjct: 1354 KEMEELHHNIDDLLQEKKSLECEVEELHRTVQKRQQQKDFIDGNVESLMTELEIEKSLKH 1413
Query: 669 HDDSREQ-ELIE 701
H+D ++ E IE
Sbjct: 1414 HEDIVDEIECIE 1425
>AK074079-1|BAB84905.1| 1793|Homo sapiens FLJ00150 protein protein.
Length = 1793
Score = 30.3 bits (65), Expect = 7.2
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Frame = +3
Query: 501 RSLPTIEHQFHPLLDQQQSI-LKVQELLIDPQNSCYSTDYIEQSQESLPGQVQIEKT--- 668
+ + + H LL +++S+ +V+EL Q D+I+ + ESL +++IEK+
Sbjct: 822 KEMEELHHNIDDLLQEKKSLECEVEELHRTVQKRQQQKDFIDGNVESLMTELEIEKSLKH 881
Query: 669 HDDSREQ-ELIE 701
H+D ++ E IE
Sbjct: 882 HEDIVDEIECIE 893
>AF513978-1|AAP43846.1| 2325|Homo sapiens CENTRIOLIN protein.
Length = 2325
Score = 30.3 bits (65), Expect = 7.2
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Frame = +3
Query: 501 RSLPTIEHQFHPLLDQQQSI-LKVQELLIDPQNSCYSTDYIEQSQESLPGQVQIEKT--- 668
+ + + H LL +++S+ +V+EL Q D+I+ + ESL +++IEK+
Sbjct: 1354 KEMEELHHNIDDLLQEKKSLECEVEELHRTVQKRQQQKDFIDGNVESLMTELEIEKSLKH 1413
Query: 669 HDDSREQ-ELIE 701
H+D ++ E IE
Sbjct: 1414 HEDIVDEIECIE 1425
>AF083322-1|AAC32373.1| 994|Homo sapiens centriole associated
protein CEP110 protein.
Length = 994
Score = 29.9 bits (64), Expect = 9.5
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Frame = +3
Query: 501 RSLPTIEHQFHPLLDQQQSI-LKVQELLIDPQNSCYSTDYIEQSQESLPGQVQIEKT--- 668
+ + + H LL +++S+ +V+EL Q D+I+ + ESL +++IEK+
Sbjct: 23 KEMEELHHNIDDLLQEKKSLECEVEELHRTVQKRQRQKDFIDGNVESLMTELEIEKSLKH 82
Query: 669 HDDSREQ-ELIE 701
H+D ++ E IE
Sbjct: 83 HEDIVDEIECIE 94
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,784,011
Number of Sequences: 237096
Number of extensions: 1425879
Number of successful extensions: 3109
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3109
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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