Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30881
         (714 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089383-1|AAL90121.1|  391|Drosophila melanogaster AT20781p pro...    34   0.17 
AE014134-1042|AAN10578.1|  391|Drosophila melanogaster CG9147-PB...    34   0.17 
AE014134-1041|AAF52337.2|  391|Drosophila melanogaster CG9147-PA...    34   0.17 

>AY089383-1|AAL90121.1|  391|Drosophila melanogaster AT20781p
           protein.
          Length = 391

 Score = 34.3 bits (75), Expect = 0.17
 Identities = 18/66 (27%), Positives = 34/66 (51%)
 Frame = +3

Query: 489 STKGRSLPTIEHQFHPLLDQQQSILKVQELLIDPQNSCYSTDYIEQSQESLPGQVQIEKT 668
           +T GRS+  +  +  P +DQ + +  +     +P   C   D +EQ ++   GQ ++EK 
Sbjct: 288 TTDGRSMAMVLEKLVPSIDQVEGLPLLTLYTREPCPLC--DDLVEQLEQGFAGQYRLEKV 345

Query: 669 HDDSRE 686
           + D +E
Sbjct: 346 YIDRKE 351


>AE014134-1042|AAN10578.1|  391|Drosophila melanogaster CG9147-PB,
           isoform B protein.
          Length = 391

 Score = 34.3 bits (75), Expect = 0.17
 Identities = 18/66 (27%), Positives = 34/66 (51%)
 Frame = +3

Query: 489 STKGRSLPTIEHQFHPLLDQQQSILKVQELLIDPQNSCYSTDYIEQSQESLPGQVQIEKT 668
           +T GRS+  +  +  P +DQ + +  +     +P   C   D +EQ ++   GQ ++EK 
Sbjct: 288 TTDGRSMAMVLEKLVPSIDQVEGLPLLTLYTREPCPLC--DDLVEQLEQGFAGQYRLEKV 345

Query: 669 HDDSRE 686
           + D +E
Sbjct: 346 YIDRKE 351


>AE014134-1041|AAF52337.2|  391|Drosophila melanogaster CG9147-PA,
           isoform A protein.
          Length = 391

 Score = 34.3 bits (75), Expect = 0.17
 Identities = 18/66 (27%), Positives = 34/66 (51%)
 Frame = +3

Query: 489 STKGRSLPTIEHQFHPLLDQQQSILKVQELLIDPQNSCYSTDYIEQSQESLPGQVQIEKT 668
           +T GRS+  +  +  P +DQ + +  +     +P   C   D +EQ ++   GQ ++EK 
Sbjct: 288 TTDGRSMAMVLEKLVPSIDQVEGLPLLTLYTREPCPLC--DDLVEQLEQGFAGQYRLEKV 345

Query: 669 HDDSRE 686
           + D +E
Sbjct: 346 YIDRKE 351


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,474,329
Number of Sequences: 53049
Number of extensions: 449334
Number of successful extensions: 1162
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1162
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)