Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30879
         (759 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    25   0.66 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    25   0.87 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.6  
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    22   6.1  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +1

Query: 571 STRIRKESESMCRTIIY*LAGDTTDFICQ-RHIQQCCRGNRRIHAFI 708
           S +   +SES+   I++ +AG  +DF C    IQ  C   R ++  I
Sbjct: 350 SVKCSIQSESLLNDILFPVAGFISDFDCDINSIQYFCLMARCLNTLI 396


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +3

Query: 315 FEDGTFKLTIEFTEEYPNKPPTVRFVSKMFH-PNVYADGGICLDILQN 455
           F D  +K+  +FT  + N    ++F+S   H    ++ GG   DI +N
Sbjct: 700 FVDRCYKMQEQFTLNFRNSDELIKFISIAKHNVRTFSAGGF-FDIRKN 746


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 264  NNIMIWNAVIFGPHDTPFEDGT 329
            N ++    VI+GP DT F++ T
Sbjct: 1130 NGVIKGYKVIYGPSDTWFDENT 1151


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +3

Query: 375 PTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDV 479
           P+V F+S+    ++   GG  L    N     YDV
Sbjct: 60  PSVHFISRTLGQDLITTGGYTLPKESNAIIHIYDV 94


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,371
Number of Sequences: 336
Number of extensions: 4529
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)