Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30879
(759 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 81 1e-15
SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37) 73 3e-13
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 3e-13
SB_15708| Best HMM Match : UQ_con (HMM E-Value=0) 66 2e-11
SB_33407| Best HMM Match : UQ_con (HMM E-Value=0) 56 3e-08
SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18) 55 7e-08
SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30) 50 2e-06
SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 5e-06
SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15) 48 1e-05
SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06) 46 3e-05
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05) 42 5e-04
SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8) 40 0.002
SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07) 40 0.002
SB_57668| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017) 38 0.012
SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39) 38 0.012
SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_40772| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_3205| Best HMM Match : FerB (HMM E-Value=5.3e-18) 29 3.1
SB_48315| Best HMM Match : GASA (HMM E-Value=1.8) 29 3.1
SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_1749| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_47222| Best HMM Match : UQ_con (HMM E-Value=5) 29 5.4
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 81.0 bits (191), Expect = 1e-15
Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 13/100 (13%)
Frame = +3
Query: 246 VRSPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYAD 425
V P ++N W+ IFGP T + G FK + F +YP PPT RF++KM+HPN+Y
Sbjct: 1146 VEVPDESNTFEWDVAIFGPPGTLYAGGYFKAHMSFPHDYPYSPPTFRFLTKMWHPNIYES 1205
Query: 426 GGICLDIL-------------QNRWSPTYDVSAILTSIQS 506
G +C+ IL RW+PT +V IL S+ S
Sbjct: 1206 GDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVIS 1245
>SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)
Length = 190
Score = 72.9 bits (171), Expect = 3e-13
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Frame = +3
Query: 291 IFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL----QNR 458
+ G TP+ G FKL I+ E YP +PP VRFV+ ++HPN+ + G ICLD L +
Sbjct: 2 LIGAEGTPYHKGIFKLDIQIPERYPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGM 61
Query: 459 WSPTYDVSAILTSI 500
W P ++S++L++I
Sbjct: 62 WKPALNISSVLSTI 75
>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 72.9 bits (171), Expect = 3e-13
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 13/95 (13%)
Frame = +3
Query: 261 DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICL 440
D ++ W ++ GP T +E+G FK ++ F +EYP +PPT+ F+S ++HPNV+ +G +C+
Sbjct: 359 DEDLYKWEIMVVGPPGTYYEEGYFKASMVFPKEYPQRPPTLTFISDIWHPNVHKNGEVCI 418
Query: 441 DIL-------------QNRWSPTYDVSAILTSIQS 506
IL RW P + V I+ S+ S
Sbjct: 419 SILHEPGEDKYGYEKADERWRPIHTVETIMLSVIS 453
>SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 145
Score = 66.5 bits (155), Expect = 2e-11
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Frame = +3
Query: 234 TYRCVRSPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPN 413
T+R V+ ++NI+ W +I P P+ G F++ I F EYP KPP + F +K++HPN
Sbjct: 12 TFRDVKVD-ESNILYWQGLIV-PEMPPYNKGAFRIEICFPAEYPFKPPKITFKTKIYHPN 69
Query: 414 VYADGGICLDILQ-NRWSPTYDVSAILTSI 500
+ G +CL I+ W P ++ ++
Sbjct: 70 IDEKGQVCLPIISPENWKPATKTEQVIQAL 99
>SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 226
Score = 56.0 bits (129), Expect = 3e-08
Identities = 31/88 (35%), Positives = 43/88 (48%)
Frame = +3
Query: 243 CVRSPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYA 422
C P +++ W + I GP + +E G F L I F +YP KPP
Sbjct: 115 CSAGPKGDDLYEWYSTILGPPGSVYEGGVFFLDIHFPSDYPFKPPK-------------- 160
Query: 423 DGGICLDILQNRWSPTYDVSAILTSIQS 506
G +CLDIL++ WSP +S +L SI S
Sbjct: 161 -GMVCLDILKDSWSPALTISKVLLSICS 187
>SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18)
Length = 215
Score = 54.8 bits (126), Expect = 7e-08
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +3
Query: 300 PHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNV-YADGGICLDILQNRWSPTYD 476
P D + G FK +++ TE+YPN PP R V+ ++HPN+ DG +CL +L + W+ + D
Sbjct: 45 PTDGAYRGGQFKFSVK-TEDYPNTPPVPRCVNNIYHPNMDLDDGSVCLSLLDD-WNESND 102
Query: 477 VSAILTSI 500
+ ++ +
Sbjct: 103 LEDLVQGL 110
>SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Frame = +3
Query: 255 PTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSK-----MFHPNVY 419
P ++I +A+I GP DTP+E G F I +YP +PP V+ ++ F+PN+Y
Sbjct: 5 PDKDDIPKIHALITGPFDTPYEGGFFYFLIRCPPDYPIRPPRVKLMTTGSGQVRFNPNLY 64
Query: 420 ADGGICLDIL 449
+G +CL I+
Sbjct: 65 RNGKVCLSII 74
>SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30)
Length = 204
Score = 50.4 bits (115), Expect = 2e-06
Identities = 21/50 (42%), Positives = 34/50 (68%), Gaps = 4/50 (8%)
Frame = +3
Query: 363 PNKPPTVRFVSKMFHPNVYADGGICLDIL----QNRWSPTYDVSAILTSI 500
P +PP VRFV+ ++HPN+ + G ICLD L + W P ++S++L++I
Sbjct: 40 PFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGMWKPALNISSVLSTI 89
>SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 48.8 bits (111), Expect = 5e-06
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 5/106 (4%)
Frame = +3
Query: 225 RGSTYRCVRSPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMF 404
R +T P ++N+ W+ + GP DT F G + I EYP KPP++ ++
Sbjct: 23 RNATELYHAQPLEDNLFEWHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPPSIMLLT--- 79
Query: 405 HPNVYADGG--ICLDILQNR---WSPTYDVSAILTSIQSF*VIPTQ 527
PN + G ICL + + W P++ + +L +I F +PT+
Sbjct: 80 -PNGRFEIGKKICLSMSAHHPETWQPSWSIRTVLMAIIGF--MPTK 122
>SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15)
Length = 243
Score = 47.6 bits (108), Expect = 1e-05
Identities = 19/67 (28%), Positives = 38/67 (56%)
Frame = +3
Query: 300 PHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDV 479
P D + G FK ++ T +YPN P++ +K++HPN+ G+C+ +L + W + D+
Sbjct: 45 PTDGAYRGGQFKFSVR-TTDYPNVAPSINCKTKIYHPNMDGYDGVCMSLLDD-WQASNDL 102
Query: 480 SAILTSI 500
++ +
Sbjct: 103 EDLVQGL 109
>SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)
Length = 739
Score = 46.4 bits (105), Expect = 3e-05
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +3
Query: 276 IWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSK---MFHPNVYADGGICL 440
I+ +I GP TP++ G F I YP+ PP+ ++S +PN+Y DG +C+
Sbjct: 635 IFRVMIEGPAGTPYDHGLFAFDILLPANYPDAPPSFHYLSMCNGRLNPNLYEDGKVCI 692
>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 44.4 bits (100), Expect = 1e-04
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = +3
Query: 387 FVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSF*VIP 521
F++K+FHPNV +G IC++ L+ W P + +L +++ ++P
Sbjct: 147 FLTKIFHPNVAKNGEICVNTLKKDWKPDLGIKQVLLTVKCLLIVP 191
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYEKRVKACVE 610
+L PNP S N A +L E +Y KR K E
Sbjct: 187 LLIVPNPESALNEEAGKLLLERYDDYSKRAKMFTE 221
>SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)
Length = 200
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 243 CVRSPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPP 377
C P +++ W + I GP + +E G F L I F +YP KPP
Sbjct: 155 CSAGPKGDDLYEWYSTILGPPGSVYEGGVFFLDIHFPSDYPFKPP 199
>SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8)
Length = 55
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 261 DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVS 395
+N + A++ GP DTP+ G F I F YPN PP V+ ++
Sbjct: 2 ENRMDFARALVTGPVDTPYSRGCFVFDIFFPGTYPNVPPLVKLIT 46
>SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)
Length = 181
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +3
Query: 255 PTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTV 383
P + + W + I GP + +E G F L I F +YP KPP V
Sbjct: 46 PKGDKLYEWYSTILGPPGSVYEGGVFFLDIHFPTDYPFKPPKV 88
>SB_57668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1107
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +3
Query: 336 LTIEFTEEYPNKPPTVRFVSKMFHPN-VYADGGICLDILQNR-WSPTYDVSAILTSIQS 506
L + FT+++P PP VR + V + G IC+++L + WS Y + A++ I +
Sbjct: 575 LNMTFTDKFPFDPPFVRVCYPVIQAGYVLSGGAICMELLTPQGWSSAYTIEAVIVQISA 633
>SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 897
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 336 LTIEFTEEYPNKPPTVRFVSKMFHPNVYADGG-ICLDILQNR-WSPTYDVSAIL 491
L I F E +P PP +R ++ DGG IC+++L + WS Y V A++
Sbjct: 793 LNITFPENFPFAPPFMRVLAPRIEGGFVLDGGAICMELLTPKGWSSAYTVEAVV 846
>SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017)
Length = 123
Score = 37.5 bits (83), Expect = 0.012
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 264 NNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVS 395
+N+ W+ + GP DT F G + I EYP KPP++ ++
Sbjct: 1 DNLFEWHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPPSIMLLT 44
>SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)
Length = 841
Score = 37.5 bits (83), Expect = 0.012
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +3
Query: 291 IFGPHDTPFEDGTFKLTIEFTEEYPNKPP 377
I GP +TPFE GT+ L I E YP PP
Sbjct: 693 IRGPPETPFEGGTYNLDIVIPETYPFNPP 721
>SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 710
Score = 37.1 bits (82), Expect = 0.015
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 294 FGPHDTPFEDGTFKLTIEFTEEYPNKPPTV 383
FGP TP+E G +K+ ++ E+YP K P++
Sbjct: 55 FGPVGTPYEGGVWKVRVDLPEKYPFKSPSI 84
>SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 36.3 bits (80), Expect = 0.027
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +3
Query: 309 TPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADG 428
T FE+ + L I YP KPPTV+FVSK+ V + G
Sbjct: 1 TVFENRIYNLKIVCGPNYPQKPPTVKFVSKINMNGVNSKG 40
>SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 36.3 bits (80), Expect = 0.027
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +3
Query: 309 TPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADG 428
T FE+ + L I YP KPPTV+FVSK+ V + G
Sbjct: 1 TVFENRIYNLKIVCGPNYPQKPPTVKFVSKINMNGVNSKG 40
>SB_40772| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 31.5 bits (68), Expect = 0.77
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 330 FKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADG 428
F+ E +P+ P V+F S +FHP ++ +G
Sbjct: 108 FREQFILAEYFPDSRPLVKFTSNVFHPQIHENG 140
>SB_3205| Best HMM Match : FerB (HMM E-Value=5.3e-18)
Length = 381
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 302 RAKYHSIPDHNIVISWAPDTPVGGSSCKRLKSLIRRL 192
R YH IP + ++ S +PD G SCK+ LI ++
Sbjct: 272 RVAYHRIPVNEVLYSVSPD--ARGKSCKKTVELIMKV 306
>SB_48315| Best HMM Match : GASA (HMM E-Value=1.8)
Length = 340
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +1
Query: 253 AQLITIL*SGML*YLALMILHLKMEHSNSQ*NLQKNIQINPQQYDLYQKCFIQMFTP 423
++L I+ +L L +IL L + + ++ LQK Q+N Q+Y + +C I+ TP
Sbjct: 254 SKLKIIVTIALLLILITIILILAVVLAQTKAKLQKGNQMNQQKYPVKLRCVIRATTP 310
>SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3408
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +3
Query: 336 LTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSI 500
+T+ TE+ +KP T RF++K+ ++ A L I +RW P +A L+S+
Sbjct: 535 MTVMSTEQMLSKPLTKRFLAKVIKASLAATTAAQLYIKASRW-PGRSSAAPLSSL 588
>SB_1749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 526
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -3
Query: 685 FLGNTVGCDADK*SQ*CPLLINK*LFYTCFHSLFVFSSILLVKLCGHRIC 536
F+ ++ CD D + C LL+ L Y + +FVF + V C C
Sbjct: 45 FVVHSQFCDKDLSLEKCDLLVGHILLYRIYFGMFVFFLFMAVVNCQASFC 94
>SB_47222| Best HMM Match : UQ_con (HMM E-Value=5)
Length = 46
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYEKRVK 598
+L DPNP+ P A++YK ++ +Y + K
Sbjct: 8 LLCDPNPDDPLVPDIARIYKTDKPKYNELAK 38
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,704,580
Number of Sequences: 59808
Number of extensions: 526877
Number of successful extensions: 1268
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1264
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -